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Lag0000371 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000371
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTranspos_assoc domain-containing protein
Genome locationchr4:5214033..5216132
RNA-Seq ExpressionLag0000371
SyntenyLag0000371
Gene Ontology termsNA
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1823294.1 unnamed protein product [Ananas comosus var. bracteatus]1.2e-2545.77Show/hide
Query:  IGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVNERDNM
        + K R SK+YLDGV +FL+FAF KA  +G+ILCPCK+C N FW N++ V +HL+C+GF  GYT W++HGE I     S    +N        ++N  D+M
Subjt:  IGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVNERDNM

Query:  QDMLQEAFGYFD----ENAFEGVNVQETPNIDALDFCDLVRD
        + ML EAFG FD    E A +  ++ E PN +A  F  LV D
Subjt:  QDMLQEAFGYFD----ENAFEGVNVQETPNIDALDFCDLVRD

XP_020106286.1 uncharacterized protein LOC109722603 [Ananas comosus]9.6e-2645.58Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN
        MDKSWI +SR S++YL GV++FL+FAF  A ++G ILCPC KC N +W +RE V DHL+C+GF+  YT W++HGE++         +F  S +H+  + +
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN

Query:  ERDNMQDMLQEAFGYF---DENAFEGVNV-QETPNIDALDFCDLVRD
          D+M  ML EAFG F   DEN  +  ++  E PN +A  F  LV D
Subjt:  ERDNMQDMLQEAFGYF---DENAFEGVNV-QETPNIDALDFCDLVRD

XP_020106661.1 uncharacterized protein LOC109722895 [Ananas comosus]2.4e-2949.66Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN
        MDKSW+ K R S++YL GV+ FL+FAF KAS++G ILCPCK C N FW +RE V +HL+C+GF   YTCWV+HGE I   S   G  +  S        +
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN

Query:  ERDNMQDMLQEAFGYFDEN----AFEGVNVQETPNIDALDFCDLVRD
          DNM++ML +AFG FDEN      E  N  E PN +A  F  LV+D
Subjt:  ERDNMQDMLQEAFGYFDEN----AFEGVNVQETPNIDALDFCDLVRD

XP_020111541.1 uncharacterized protein LOC109726394 isoform X1 [Ananas comosus]4.3e-2641.94Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----
        MDKSWI KSR SKEY DGV  FLNFAFE++S+DG ILCPC +C N  W  RE V +HLVCNGF  GYT W  HGESI   S S    +  + P+      
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----

Query:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD
         + +  +  D+M+ +L++A     +++    + ++ PN     +++ + CD+  D
Subjt:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD

XP_020111543.1 uncharacterized protein LOC109726394 isoform X2 [Ananas comosus]4.3e-2641.94Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----
        MDKSWI KSR SKEY DGV  FLNFAFE++S+DG ILCPC +C N  W  RE V +HLVCNGF  GYT W  HGESI   S S    +  + P+      
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----

Query:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD
         + +  +  D+M+ +L++A     +++    + ++ PN     +++ + CD+  D
Subjt:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD

TrEMBL top hitse value%identityAlignment
A0A6P5GCE5 uncharacterized protein LOC1097226034.6e-2645.58Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN
        MDKSWI +SR S++YL GV++FL+FAF  A ++G ILCPC KC N +W +RE V DHL+C+GF+  YT W++HGE++         +F  S +H+  + +
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN

Query:  ERDNMQDMLQEAFGYF---DENAFEGVNV-QETPNIDALDFCDLVRD
          D+M  ML EAFG F   DEN  +  ++  E PN +A  F  LV D
Subjt:  ERDNMQDMLQEAFGYF---DENAFEGVNV-QETPNIDALDFCDLVRD

A0A6P5GDG8 uncharacterized protein LOC1097228951.2e-2949.66Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN
        MDKSW+ K R S++YL GV+ FL+FAF KAS++G ILCPCK C N FW +RE V +HL+C+GF   YTCWV+HGE I   S   G  +  S        +
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVN

Query:  ERDNMQDMLQEAFGYFDEN----AFEGVNVQETPNIDALDFCDLVRD
          DNM++ML +AFG FDEN      E  N  E PN +A  F  LV+D
Subjt:  ERDNMQDMLQEAFGYFDEN----AFEGVNVQETPNIDALDFCDLVRD

A0A6P5GSB3 uncharacterized protein LOC109726394 isoform X12.1e-2641.94Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----
        MDKSWI KSR SKEY DGV  FLNFAFE++S+DG ILCPC +C N  W  RE V +HLVCNGF  GYT W  HGESI   S S    +  + P+      
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----

Query:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD
         + +  +  D+M+ +L++A     +++    + ++ PN     +++ + CD+  D
Subjt:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD

A0A6P5H0V7 uncharacterized protein LOC109726394 isoform X22.1e-2641.94Show/hide
Query:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----
        MDKSWI KSR SKEY DGV  FLNFAFE++S+DG ILCPC +C N  W  RE V +HLVCNGF  GYT W  HGESI   S S    +  + P+      
Subjt:  MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFN-ESPIH-----

Query:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD
         + +  +  D+M+ +L++A     +++    + ++ PN     +++ + CD+  D
Subjt:  -ESLDVNERDNMQDMLQEAFGYFDENAFEGVNVQETPN-----IDALDFCDLVRD

A0A6V7NY73 Transpos_assoc domain-containing protein6.1e-2645.77Show/hide
Query:  IGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVNERDNM
        + K R SK+YLDGV +FL+FAF KA  +G+ILCPCK+C N FW N++ V +HL+C+GF  GYT W++HGE I     S    +N        ++N  D+M
Subjt:  IGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVNERDNM

Query:  QDMLQEAFGYFD----ENAFEGVNVQETPNIDALDFCDLVRD
        + ML EAFG FD    E A +  ++ E PN +A  F  LV D
Subjt:  QDMLQEAFGYFD----ENAFEGVNVQETPNIDALDFCDLVRD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAGTTGGATTGGTAAATCTAGAGGTAGTAAAGAATATTTAGATGGAGTCGCTTCATTTCTGAACTTTGCCTTTGAGAAAGCATCTGAAGATGGAAATATTTT
GTGCCCATGCAAAAAATGTGGAAACACATTTTGGTTTAACAGAGAAAATGTATACGATCATCTAGTGTGTAATGGATTTGCTATAGGTTATACTTGTTGGGTTTTCCATG
GTGAATCTATTTTGGATCGCTCAGTTAGCCAAGGTCAAGTTTTCAATGAATCTCCTATTCATGAAAGTTTAGATGTAAATGAACGTGATAATATGCAAGACATGTTGCAA
GAAGCTTTTGGATATTTTGATGAAAATGCATTCGAAGGAGTCAATGTCCAGGAAACACCAAATATTGATGCATTAGATTTTTGTGACTTAGTTAGAGACTGTAATTATAG
CTCAAAAGCTTCTCAGATGGAAGTGTTTGAACAAGTCATGGGTAGAGAACATTCAAGACGTGTTCGTGCAATGGGATTAGGACCTACCCCATCTAAAGTTTTTAAAACTA
CACATTGTCGATTTGCGAGGGTCGAGATCAATTCTGGGACAAGTATGGAAGACCATGAAACTATAGAAGAAGGATCTAGAATAACCAAATTAGAGTCTGAAGTGGCAGAG
ATACGGTTACATATGAAAAAAGTGCTTTCAAAATTAGATCAAATTAATTGTATGCAGGTTGATAGTACCAGTGGGACATCTTTGGATGACAATTCAAGAGAGTTAACAAA
ACTGTTGTATTACGACATTAACAACCGCTGCAAATTGAGTACCTATCGTGGCGGTTATTTCACTCTGATTCCAGCGGTTGTCAAAACTGTTGCAATAAGTCATCCCAACA
CAGCTTCTGCCAGCGGTTTTGTAACCGCTGCAAAAATCTGGCAGCGGTTAAAAACCGCTACAACAGCTCAAAAAAACCGCTGCAGTACACCTTTCATCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACAAGAGTTGGATTGGTAAATCTAGAGGTAGTAAAGAATATTTAGATGGAGTCGCTTCATTTCTGAACTTTGCCTTTGAGAAAGCATCTGAAGATGGAAATATTTT
GTGCCCATGCAAAAAATGTGGAAACACATTTTGGTTTAACAGAGAAAATGTATACGATCATCTAGTGTGTAATGGATTTGCTATAGGTTATACTTGTTGGGTTTTCCATG
GTGAATCTATTTTGGATCGCTCAGTTAGCCAAGGTCAAGTTTTCAATGAATCTCCTATTCATGAAAGTTTAGATGTAAATGAACGTGATAATATGCAAGACATGTTGCAA
GAAGCTTTTGGATATTTTGATGAAAATGCATTCGAAGGAGTCAATGTCCAGGAAACACCAAATATTGATGCATTAGATTTTTGTGACTTAGTTAGAGACTGTAATTATAG
CTCAAAAGCTTCTCAGATGGAAGTGTTTGAACAAGTCATGGGTAGAGAACATTCAAGACGTGTTCGTGCAATGGGATTAGGACCTACCCCATCTAAAGTTTTTAAAACTA
CACATTGTCGATTTGCGAGGGTCGAGATCAATTCTGGGACAAGTATGGAAGACCATGAAACTATAGAAGAAGGATCTAGAATAACCAAATTAGAGTCTGAAGTGGCAGAG
ATACGGTTACATATGAAAAAAGTGCTTTCAAAATTAGATCAAATTAATTGTATGCAGGTTGATAGTACCAGTGGGACATCTTTGGATGACAATTCAAGAGAGTTAACAAA
ACTGTTGTATTACGACATTAACAACCGCTGCAAATTGAGTACCTATCGTGGCGGTTATTTCACTCTGATTCCAGCGGTTGTCAAAACTGTTGCAATAAGTCATCCCAACA
CAGCTTCTGCCAGCGGTTTTGTAACCGCTGCAAAAATCTGGCAGCGGTTAAAAACCGCTACAACAGCTCAAAAAAACCGCTGCAGTACACCTTTCATCCTGTAG
Protein sequenceShow/hide protein sequence
MDKSWIGKSRGSKEYLDGVASFLNFAFEKASEDGNILCPCKKCGNTFWFNRENVYDHLVCNGFAIGYTCWVFHGESILDRSVSQGQVFNESPIHESLDVNERDNMQDMLQ
EAFGYFDENAFEGVNVQETPNIDALDFCDLVRDCNYSSKASQMEVFEQVMGREHSRRVRAMGLGPTPSKVFKTTHCRFARVEINSGTSMEDHETIEEGSRITKLESEVAE
IRLHMKKVLSKLDQINCMQVDSTSGTSLDDNSRELTKLLYYDINNRCKLSTYRGGYFTLIPAVVKTVAISHPNTASASGFVTAAKIWQRLKTATTAQKNRCSTPFIL