; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000376 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000376
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr4:5382599..5382982
RNA-Seq ExpressionLag0000376
SyntenyLag0000376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042447.1 hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa]4.3e-2255.83Show/hide
Query:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG
        MA T  IP+  MAI ILILL N    +  VN+TA +WC G  ENCL+GD +SDSEFLM T+T+RML      QT +TN+PN  SVP CGRP  RYDSC+G
Subjt:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG

Query:  GEREIPKSEHCDTFQR-NPC
         +R I   E+CD   R NPC
Subjt:  GEREIPKSEHCDTFQR-NPC

KAE8649335.1 hypothetical protein Csa_014907 [Cucumis sativus]1.6e-2157.14Show/hide
Query:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG
        MA T  IP+  MAI IL LL NPT  +  VN+T ++WC G  ENCLVGD + DSEFLM TET+RML      QT  T DPN  SV  CGRP  RYDSC G
Subjt:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG

Query:  GEREIPKSEHCDTFQR-NP
         ER+IP  E+CD   R NP
Subjt:  GEREIPKSEHCDTFQR-NP

KAG6607065.1 hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3363.78Show/hide
Query:  MGLSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPST
        MG++SNTMAATL  PSM +   IL+L P PTIS AA+N TA +WCDG LENCL+GDLNSDSEFLM TET+RML   N+FQT NTN+P+  S P C RP  
Subjt:  MGLSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPST

Query:  RYDSCLGGEREIPKSEHCDTFQR-NPC
        RYD CLG +  IP  E+CDT  R NPC
Subjt:  RYDSCLGGEREIPKSEHCDTFQR-NPC

KAG7011063.1 hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3364.57Show/hide
Query:  MGLSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPST
        MG++SNTMAATL  PSM +   IL+L P PTIS AA+N TA +WCDG LENCL+GDLNSDSEFLM TET+RML   N+FQT NTN+P+  S P C RP  
Subjt:  MGLSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPST

Query:  RYDSCLGGEREIPKSEHCDTFQR-NPC
        RYDSCLG +  IP  E+CDT  R NPC
Subjt:  RYDSCLGGEREIPKSEHCDTFQR-NPC

KGN53798.1 hypothetical protein Csa_014747 [Cucumis sativus]3.0e-2862.99Show/hide
Query:  LSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDG-GLENCLVGDLNSDSEFLMGTETTRML-QQSNTFQTSNTNDPNNPSVPACGRPST
        L SN+MAATL +PSMA  I IL+L  NP IS+A +NDT +KWCD  GLENCLVGDLNS SEFLM TE++ ML  Q  TFQT   ND N  SVP C RP  
Subjt:  LSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDG-GLENCLVGDLNSDSEFLMGTETTRML-QQSNTFQTSNTNDPNNPSVPACGRPST

Query:  RYDSCLGGEREIPKSEHCDTFQR-NPC
        RYDSCLG +R IP  E C T  R NPC
Subjt:  RYDSCLGGEREIPKSEHCDTFQR-NPC

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ2 Uncharacterized protein7.1e-2357.5Show/hide
Query:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG
        MA T  IP+  MAI IL LL NPT  +  VN+T ++WC G  ENCLVGD + DSEFLM TET+RML      QT  T DPN  SV  CGRP  RYDSC G
Subjt:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG

Query:  GEREIPKSEHCDTFQR-NPC
         ER+IP  E+CD   R NPC
Subjt:  GEREIPKSEHCDTFQR-NPC

A0A0A0KW62 Uncharacterized protein1.5e-2862.99Show/hide
Query:  LSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDG-GLENCLVGDLNSDSEFLMGTETTRML-QQSNTFQTSNTNDPNNPSVPACGRPST
        L SN+MAATL +PSMA  I IL+L  NP IS+A +NDT +KWCD  GLENCLVGDLNS SEFLM TE++ ML  Q  TFQT   ND N  SVP C RP  
Subjt:  LSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDG-GLENCLVGDLNSDSEFLMGTETTRML-QQSNTFQTSNTNDPNNPSVPACGRPST

Query:  RYDSCLGGEREIPKSEHCDTFQR-NPC
        RYDSCLG +R IP  E C T  R NPC
Subjt:  RYDSCLGGEREIPKSEHCDTFQR-NPC

A0A5D3BZL1 Uncharacterized protein2.1e-2255.83Show/hide
Query:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG
        MA T  IP+  MAI ILILL N    +  VN+TA +WC G  ENCL+GD +SDSEFLM T+T+RML      QT +TN+PN  SVP CGRP  RYDSC+G
Subjt:  MAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLG

Query:  GEREIPKSEHCDTFQR-NPC
         +R I   E+CD   R NPC
Subjt:  GEREIPKSEHCDTFQR-NPC

A0A6J1G927 uncharacterized protein LOC1114520443.5e-1447.9Show/hide
Query:  AATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLGG
        AA + IP+   A+AI+ILL NPT SDA  +              L+GD + DSEFLM +  +R+L  S  FQTS TND N  S   CGRP  RYDSCLG 
Subjt:  AATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLGG

Query:  EREIPKSEHCDTFQR-NPC
        +   P  E+C TF R NPC
Subjt:  EREIPKSEHCDTFQR-NPC

A0A6J1KBP5 uncharacterized protein LOC1114928545.1e-1347.06Show/hide
Query:  AATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLGG
        AA + IP+   A+AI+ILL NPT SDA                 L+GD + DSEFLM +  +R+L  S  FQTS TND N  S   C RP  RYDSCLG 
Subjt:  AATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLGG

Query:  EREIPKSEHCDTFQR-NPC
        +   P  E+C TF R NPC
Subjt:  EREIPKSEHCDTFQR-NPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTTTCTTCAAACACCATGGCTGCAACACTGCCGATTCCATCAATGGCAATGGCGATCGCGATCCTGATTCTGCTGCCGAATCCAACCATTTCCGATGCCGCCGT
CAACGATACCGCGACTAAGTGGTGCGACGGCGGCCTGGAAAACTGCCTCGTGGGCGACCTGAACTCCGATTCGGAGTTTCTGATGGGGACAGAGACCACCCGGATGCTGC
AGCAGTCCAATACTTTCCAAACTTCCAACACCAACGACCCTAACAACCCATCGGTTCCGGCATGTGGTCGGCCGTCGACGCGATACGACAGCTGCCTCGGCGGTGAGAGG
GAGATCCCGAAATCTGAACATTGCGACACCTTTCAGCGCAACCCCTGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTTTCTTCAAACACCATGGCTGCAACACTGCCGATTCCATCAATGGCAATGGCGATCGCGATCCTGATTCTGCTGCCGAATCCAACCATTTCCGATGCCGCCGT
CAACGATACCGCGACTAAGTGGTGCGACGGCGGCCTGGAAAACTGCCTCGTGGGCGACCTGAACTCCGATTCGGAGTTTCTGATGGGGACAGAGACCACCCGGATGCTGC
AGCAGTCCAATACTTTCCAAACTTCCAACACCAACGACCCTAACAACCCATCGGTTCCGGCATGTGGTCGGCCGTCGACGCGATACGACAGCTGCCTCGGCGGTGAGAGG
GAGATCCCGAAATCTGAACATTGCGACACCTTTCAGCGCAACCCCTGTTCTTGA
Protein sequenceShow/hide protein sequence
MGLSSNTMAATLPIPSMAMAIAILILLPNPTISDAAVNDTATKWCDGGLENCLVGDLNSDSEFLMGTETTRMLQQSNTFQTSNTNDPNNPSVPACGRPSTRYDSCLGGER
EIPKSEHCDTFQRNPCS