| GenBank top hits | e value | %identity | Alignment |
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| KAA0042223.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.8e-60 | 53.07 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++D+ + K KN FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| KAA0051006.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-60 | 52.71 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| KAA0056761.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 7.0e-60 | 52.35 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L L ELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| TYK04394.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-60 | 52.71 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| TYK26791.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | 4.1e-60 | 52.71 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TG73 Ty1-copia retrotransposon protein | 8.9e-61 | 53.07 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++D+ + K KN FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| A0A5A7U9X9 Ty1-copia retrotransposon protein | 6.8e-61 | 52.71 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| A0A5D3BZI1 Ty1-copia retrotransposon protein | 6.8e-61 | 52.71 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| A0A5D3C5T2 Ty1-copia retrotransposon protein | 3.4e-60 | 52.35 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L L ELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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| A0A5D3DSQ3 Ty1-copia retrotransposon protein | 2.0e-60 | 52.71 | Show/hide |
Query: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
R QK IFFEQ +VDY+LTTD E P ++ V KK + IDPEK+ KDNK VRGHLLNHM+D +F+LFVV KSAK
Subjt: REDQQKPFIFFEQRKVDYILTTDHVEKSAALAADLEKSKEVEPDPHSSKEVQTDPKKSKGSHDIDPEKFEKDNKMVRGHLLNHMNDSLFNLFVVHKSAKV
Query: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
IW TLESRYG DAGRKKYVV EGMKMCEILQANVLLEKFP SW++YRNHLK +KK+L LQELI+HMRTEE
Subjt: IWDTLESRYGSVDAGRKKYVV------------------------------EGMKMCEILQANVLLEKFPSSWSNYRNHLK-QKKNLALQELINHMRTEE
Query: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
N KDKL S++LNSVNANLVE+S ++DR + K + FK+ G+++ K KL+CYVCGK HKSYQCN
Subjt: VNMQKDKLLSKSLNSVNANLVETSVASKDRFTNKNKDKSSQKKNHPFKSPSGKVEKDKSKLICYVCGKPWHKSYQCN
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