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Lag0000380 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000380
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:5474423..5475105
RNA-Seq ExpressionLag0000380
SyntenyLag0000380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]3.8e-2648.89Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFR-------------
        +EF E E   + HPHNDALV+ L IANAKVHR+L+D GSSTD+ S+  ++AM LG++ L+ SLTPL+GFGGE++ P+  IELP TFR             
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFR-------------

Query:  ------------EGSTLHELKAMASTYHQILKFPT
                    E  T+H L+A+ STYHQ +KFPT
Subjt:  ------------EGSTLHELKAMASTYHQILKFPT

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]4.6e-2448.89Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------
        +EF+E EV  I HPHNDALV+NL IANAKVH +L+D GSS D++S+  ++ M LG+  L+ S  PLVGFGGE V PE  IELP TF  G           
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------

Query:  --------------STLHELKAMASTYHQILKFPT
                       T+H LKA+ S YHQ +KFPT
Subjt:  --------------STLHELKAMASTYHQILKFPT

XP_022154102.1 uncharacterized protein LOC111021438 [Momordica charantia]2.7e-2447.41Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------
        +EF +  V  + HPHNDAL++ L IANAKVHR+L+D GSS D +S+  ++AM LGK+ L+ SLTPL+GFGGE+V P   IELP TF  G           
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------

Query:  --------------STLHELKAMASTYHQILKFPT
                       T++ LKA+ STYHQ +KFPT
Subjt:  --------------STLHELKAMASTYHQILKFPT

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]3.8e-2647.37Show/hide
Query:  DDPPLEIRTILGVRPA-LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELP
        + P  EIRTI+  +PA LEF E E   + HPHNDALV+ L IANAKVHR+L+D GSST ++S+  ++AM LG+  L+ S  PLVGFGGE+V PE  IELP
Subjt:  DDPPLEIRTILGVRPA-LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELP

Query:  FTFREG-------------------------STLHELKAMASTYHQILKFPT
          F  G                           +H LK + STYHQ +KFPT
Subjt:  FTFREG-------------------------STLHELKAMASTYHQILKFPT

XP_022158432.1 uncharacterized protein LOC111024924 [Momordica charantia]5.1e-2345.93Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------
        +EF E E   + H HNDALV+ L IANAKVHR+L+++GSS D++S+  ++AM LG+  L+ S  PL+GFGGE+V PE  IELP TF  G           
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------

Query:  --------------STLHELKAMASTYHQILKFPT
                       T+H L+A+ STYHQ +KFPT
Subjt:  --------------STLHELKAMASTYHQILKFPT

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159011.8e-2648.89Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFR-------------
        +EF E E   + HPHNDALV+ L IANAKVHR+L+D GSSTD+ S+  ++AM LG++ L+ SLTPL+GFGGE++ P+  IELP TFR             
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFR-------------

Query:  ------------EGSTLHELKAMASTYHQILKFPT
                    E  T+H L+A+ STYHQ +KFPT
Subjt:  ------------EGSTLHELKAMASTYHQILKFPT

A0A6J1DAK4 uncharacterized protein LOC1110189022.2e-2448.89Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------
        +EF+E EV  I HPHNDALV+NL IANAKVH +L+D GSS D++S+  ++ M LG+  L+ S  PLVGFGGE V PE  IELP TF  G           
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------

Query:  --------------STLHELKAMASTYHQILKFPT
                       T+H LKA+ S YHQ +KFPT
Subjt:  --------------STLHELKAMASTYHQILKFPT

A0A6J1DKR9 uncharacterized protein LOC1110214381.3e-2447.41Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------
        +EF +  V  + HPHNDAL++ L IANAKVHR+L+D GSS D +S+  ++AM LGK+ L+ SLTPL+GFGGE+V P   IELP TF  G           
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------

Query:  --------------STLHELKAMASTYHQILKFPT
                       T++ LKA+ STYHQ +KFPT
Subjt:  --------------STLHELKAMASTYHQILKFPT

A0A6J1DP33 uncharacterized protein LOC1110228861.8e-2647.37Show/hide
Query:  DDPPLEIRTILGVRPA-LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELP
        + P  EIRTI+  +PA LEF E E   + HPHNDALV+ L IANAKVHR+L+D GSST ++S+  ++AM LG+  L+ S  PLVGFGGE+V PE  IELP
Subjt:  DDPPLEIRTILGVRPA-LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELP

Query:  FTFREG-------------------------STLHELKAMASTYHQILKFPT
          F  G                           +H LK + STYHQ +KFPT
Subjt:  FTFREG-------------------------STLHELKAMASTYHQILKFPT

A0A6J1DX76 uncharacterized protein LOC1110249242.5e-2345.93Show/hide
Query:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------
        +EF E E   + H HNDALV+ L IANAKVHR+L+++GSS D++S+  ++AM LG+  L+ S  PL+GFGGE+V PE  IELP TF  G           
Subjt:  LEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELPFTFREG-----------

Query:  --------------STLHELKAMASTYHQILKFPT
                       T+H L+A+ STYHQ +KFPT
Subjt:  --------------STLHELKAMASTYHQILKFPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCAGAACAAAACGAGACCGATATGGTGACGACCCGCCACTGGAAATTCGAACTATCCTAGGAGTTAGACCTGCCCTGGAATTCATAGAGAAAGAAGTTGTTGG
AATCCATCACCCTCACAATGATGCCTTGGTGGTAAATTTGATCATCGCCAATGCAAAAGTCCATCGAGTCCTGATCGACAAAGGAAGTTCCACTGATGTTCTCTCCATGA
ATGTATTTGAGGCCATGAAGCTAGGAAAAGACCGCTTGAGGCCAAGTCTCACACCATTGGTGGGATTCGGAGGAGAAAAAGTGAGCCCTGAAAGAAGCATTGAGCTCCCA
TTTACCTTCAGAGAAGGGTCGACCCTGCATGAACTCAAAGCCATGGCGTCAACTTACCACCAGATCTTGAAGTTTCCCACTGAGGAGGTATACGAGTCGTGCACAGAGAA
TAGTGGATATCTAGAGAGTGCTACTTCATTGCACTCAAGGAAACAACCAAAGCAGCCCCGTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCAGAACAAAACGAGACCGATATGGTGACGACCCGCCACTGGAAATTCGAACTATCCTAGGAGTTAGACCTGCCCTGGAATTCATAGAGAAAGAAGTTGTTGG
AATCCATCACCCTCACAATGATGCCTTGGTGGTAAATTTGATCATCGCCAATGCAAAAGTCCATCGAGTCCTGATCGACAAAGGAAGTTCCACTGATGTTCTCTCCATGA
ATGTATTTGAGGCCATGAAGCTAGGAAAAGACCGCTTGAGGCCAAGTCTCACACCATTGGTGGGATTCGGAGGAGAAAAAGTGAGCCCTGAAAGAAGCATTGAGCTCCCA
TTTACCTTCAGAGAAGGGTCGACCCTGCATGAACTCAAAGCCATGGCGTCAACTTACCACCAGATCTTGAAGTTTCCCACTGAGGAGGTATACGAGTCGTGCACAGAGAA
TAGTGGATATCTAGAGAGTGCTACTTCATTGCACTCAAGGAAACAACCAAAGCAGCCCCGTGCTTGA
Protein sequenceShow/hide protein sequence
MSIRTKRDRYGDDPPLEIRTILGVRPALEFIEKEVVGIHHPHNDALVVNLIIANAKVHRVLIDKGSSTDVLSMNVFEAMKLGKDRLRPSLTPLVGFGGEKVSPERSIELP
FTFREGSTLHELKAMASTYHQILKFPTEEVYESCTENSGYLESATSLHSRKQPKQPRA