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Lag0000383 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000383
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag-pro-like protein
Genome locationchr4:5501211..5501977
RNA-Seq ExpressionLag0000383
SyntenyLag0000383
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]3.3e-4252.36Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+ IPSN G FGLGYKP   DKIRLQE+KK+KRL +LE + F  S+K +P LYD FKS G+S+S+ +S   D LL ++ +L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDLP FS+D QD                TL+  I+ MESDKE+D E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

KAA0036957.1 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein [Cucumis melo var. makuwa]1.2e-4151.83Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+ IPSN G FGLGYKP   DKIRLQE KK+KRL++LE + F  S+K +P LYD FKS G+S+S+ +S   D LL ++ +L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDLP FS+D  D                TL+  I+ MESDKE+D E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

KAA0066096.1 uncharacterized protein E6C27_scaffold21G00870 [Cucumis melo var. makuwa]9.5e-4253.4Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+  PSN G FGLGYKP   DKIRLQEEKK+K L++LE + F  S+KR+P LYD FKS G+S+S+ +S   D LLM++R+L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDL  FS+D QD                TL+  I+ MESDKESD E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]1.9e-4252.88Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+ IPSN G FGLGYKP   DKIRLQE+KK+KRL++LE + F  S+K +P LYD FKS G+S+S+ +S   D LL ++ +L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDLP FS+D QD                TL+  I+ MESDKESD E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

XP_031742240.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116404130 [Cucumis sativus]9.2e-4555.96Show/hide
Query:  TTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNLS
        T R++  G Y LNQ+LE L++ PSN G FGLGY P   DKIRLQ+EKK++ L +     F  SLK +P+LYD FKS G+S+S+ DS S   LL ++ +LS
Subjt:  TTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNLS

Query:  IATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDV---SLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        IA +  E   E++ +YAC P+FE NNWDVVDLP FS D QDPN F+ N+ KNEDV   S TL+T I+ MESDKESD E     SSELLRLVEE
Subjt:  IATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDV---SLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein1.6e-4252.36Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+ IPSN G FGLGYKP   DKIRLQE+KK+KRL +LE + F  S+K +P LYD FKS G+S+S+ +S   D LL ++ +L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDLP FS+D QD                TL+  I+ MESDKE+D E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

A0A5A7T5W6 RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H-like protein6.0e-4251.83Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+ IPSN G FGLGYKP   DKIRLQE KK+KRL++LE + F  S+K +P LYD FKS G+S+S+ +S   D LL ++ +L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDLP FS+D  D                TL+  I+ MESDKE+D E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

A0A5A7VIB2 Uncharacterized protein4.6e-4253.4Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+  PSN G FGLGYKP   DKIRLQEEKK+K L++LE + F  S+KR+P LYD FKS G+S+S+ +S   D LLM++R+L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDL  FS+D QD                TL+  I+ MESDKESD E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

A0A5D3C117 Uncharacterized protein1.7e-4151.83Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MT+R++  G Y LN+NLE L+  PSN G FGLGYKP   DKIRLQEE K+KRL++LE + F  S+KR+P LYD FKS G+S+S+ +S     LL ++ +L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E +I+YAC PDFE NNWD VDLP FS+  QD                T + SI+ MESDKESD E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

A0A5D3DEB3 Retrotrans_gag domain-containing protein9.3e-4352.88Show/hide
Query:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL
        MTTR++  G Y LN+NLE L+ IPSN G FGLGYKP   DKIRLQE+KK+KRL++LE + F  S+K +P LYD FKS G+S+S+ +S   D LL ++ +L
Subjt:  MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNL

Query:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE
        S+A +  E   E + +YAC PDFE NNWD VDLP FS+D QD                TL+  I+ MESDKESD E++   SSELLR+VEE
Subjt:  SIATIVNELPHEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACTAGAGTAGTGGTAAATGGAAGATATCAGTTGAATCAAAACTTAGAAAGGTTGATGAGCATACCCAGCAATGTTGGGACATTTGGGTTGGGCTATAAACCTAT
CAAATGTGATAAAATTAGACTTCAAGAAGAAAAGAAAGAAAAGCGATTGTCCAGGTTAGAAGGAAAGAGATTCACTTCAAGTCTCAAACGTTTACCATCATTGTATGATA
ACTTCAAAAGTGTTGGCTTGAGCTTCTCAACATTGGACTCTTACTCAACAGATCACTTATTAATGGAAGTGCGAAACTTATCGATCGCAACAATTGTTAATGAGCTACCA
CACGAAGAGGACATAATCTACGCATGTTCACCTGATTTCGAGCATAACAATTGGGATGTTGTAGATCTACCTGTATTTTCACAAGATTTGCAAGATCCAAATGGCTTCAT
GGGCAATGTTCCTAAGAATGAAGATGTTAGTCTTACCCTTGAGACTTCGATACACAACATGGAGTCCGATAAGGAAAGTGATGTTGAAGAAGAGTTTGAACCATCTTCAG
AATTATTAAGGTTGGTGGAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAACTAGAGTAGTGGTAAATGGAAGATATCAGTTGAATCAAAACTTAGAAAGGTTGATGAGCATACCCAGCAATGTTGGGACATTTGGGTTGGGCTATAAACCTAT
CAAATGTGATAAAATTAGACTTCAAGAAGAAAAGAAAGAAAAGCGATTGTCCAGGTTAGAAGGAAAGAGATTCACTTCAAGTCTCAAACGTTTACCATCATTGTATGATA
ACTTCAAAAGTGTTGGCTTGAGCTTCTCAACATTGGACTCTTACTCAACAGATCACTTATTAATGGAAGTGCGAAACTTATCGATCGCAACAATTGTTAATGAGCTACCA
CACGAAGAGGACATAATCTACGCATGTTCACCTGATTTCGAGCATAACAATTGGGATGTTGTAGATCTACCTGTATTTTCACAAGATTTGCAAGATCCAAATGGCTTCAT
GGGCAATGTTCCTAAGAATGAAGATGTTAGTCTTACCCTTGAGACTTCGATACACAACATGGAGTCCGATAAGGAAAGTGATGTTGAAGAAGAGTTTGAACCATCTTCAG
AATTATTAAGGTTGGTGGAGGAATAG
Protein sequenceShow/hide protein sequence
MTTRVVVNGRYQLNQNLERLMSIPSNVGTFGLGYKPIKCDKIRLQEEKKEKRLSRLEGKRFTSSLKRLPSLYDNFKSVGLSFSTLDSYSTDHLLMEVRNLSIATIVNELP
HEEDIIYACSPDFEHNNWDVVDLPVFSQDLQDPNGFMGNVPKNEDVSLTLETSIHNMESDKESDVEEEFEPSSELLRLVEE