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Lag0000384 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000384
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr4:5516978..5517364
RNA-Seq ExpressionLag0000384
SyntenyLag0000384
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042447.1 hypothetical protein E6C27_scaffold266G00270 [Cucumis melo var. makuwa]2.1e-2958.97Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR
        MA T  IP+MAI I+ILL N    +  +NETA EWC G  ENCL+GD +SD EFLM T++SRML      QT +TN+PN+ SV  CGR PRYDSC+G+KR
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR

Query:  VIKKPENCDIFNRRNPC
         I  PENCD+ NR NPC
Subjt:  VIKKPENCDIFNRRNPC

KAE8649335.1 hypothetical protein Csa_014907 [Cucumis sativus]8.9e-2858.33Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR
        MA T  IP+MAI I+ LL NPT  +  +NET SEWC G  ENCLVGD + D EFLM TE+SRML      QT  T DPN+ SV  CGR PRYDSC G++R
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR

Query:  VIKKPENCDIFNRRNPCPKL
         I  PENCD+ NR NP  +L
Subjt:  VIKKPENCDIFNRRNPCPKL

KAG6607065.1 hypothetical protein SDJN03_00407, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3868.8Show/hide
Query:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRY
        MG +SNTMAATLL PSM I  +ILLLN PTIS AAIN+TA+EWCDG LENCL+GDLNSD EFLM TE+SRML     FQT NTN+P+K S   C R PRY
Subjt:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRY

Query:  DSCLGDKRVIKKPENCDIFNRRNPC
        D CLG K +I  PENCD  NR NPC
Subjt:  DSCLGDKRVIKKPENCDIFNRRNPC

KAG7011063.1 hypothetical protein SDJN02_27861, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-3869.6Show/hide
Query:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRY
        MG +SNTMAATLL PSM I  +ILLLN PTIS AAIN+TA+EWCDG LENCL+GDLNSD EFLM TE+SRML     FQT NTN+P+K S   C R PRY
Subjt:  MGFSSNTMAATLLIPSMAIPIMILLLN-PTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRY

Query:  DSCLGDKRVIKKPENCDIFNRRNPC
        DSCLG K  I  PENCD  NR NPC
Subjt:  DSCLGDKRVIKKPENCDIFNRRNPC

KGN53798.1 hypothetical protein Csa_014747 [Cucumis sativus]6.0e-3265.57Show/hide
Query:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDG-GLENCLVGDLNSDWEFLMGTESSRML-RQSIKFQTSNTNDPNKASVKSCGRLPRYDSC
        SN+MAATL +PSMA  I ILLLNP IS+A +N+T S+WCD  GLENCLVGDLNS  EFLM TESS ML  Q + FQT   ND NK SV  C R PRYDSC
Subjt:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDG-GLENCLVGDLNSDWEFLMGTESSRML-RQSIKFQTSNTNDPNKASVKSCGRLPRYDSC

Query:  LGDKRVIKKPENCDIFNRRNPC
        LG KR I  PE C   NR NPC
Subjt:  LGDKRVIKKPENCDIFNRRNPC

TrEMBL top hitse value%identityAlignment
A0A0A0KVZ2 Uncharacterized protein3.9e-2959.83Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR
        MA T  IP+MAI I+ LL NPT  +  +NET SEWC G  ENCLVGD + D EFLM TE+SRML      QT  T DPN+ SV  CGR PRYDSC G++R
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR

Query:  VIKKPENCDIFNRRNPC
         I  PENCD+ NR NPC
Subjt:  VIKKPENCDIFNRRNPC

A0A0A0KW62 Uncharacterized protein2.9e-3265.57Show/hide
Query:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDG-GLENCLVGDLNSDWEFLMGTESSRML-RQSIKFQTSNTNDPNKASVKSCGRLPRYDSC
        SN+MAATL +PSMA  I ILLLNP IS+A +N+T S+WCD  GLENCLVGDLNS  EFLM TESS ML  Q + FQT   ND NK SV  C R PRYDSC
Subjt:  SNTMAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDG-GLENCLVGDLNSDWEFLMGTESSRML-RQSIKFQTSNTNDPNKASVKSCGRLPRYDSC

Query:  LGDKRVIKKPENCDIFNRRNPC
        LG KR I  PE C   NR NPC
Subjt:  LGDKRVIKKPENCDIFNRRNPC

A0A5D3BZL1 Uncharacterized protein1.0e-2958.97Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR
        MA T  IP+MAI I+ILL N    +  +NETA EWC G  ENCL+GD +SD EFLM T++SRML      QT +TN+PN+ SV  CGR PRYDSC+G+KR
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR

Query:  VIKKPENCDIFNRRNPC
         I  PENCD+ NR NPC
Subjt:  VIKKPENCDIFNRRNPC

A0A6J1G927 uncharacterized protein LOC1114520444.3e-2052.99Show/hide
Query:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR
        MAA  +I   A+ IMILLLNPT SDA  +              L+GD + D EFLM +  SR+L  S  FQTS TND NKAS   CGR PRYDSCLG K 
Subjt:  MAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKR

Query:  VIKKPENCDIFNRRNPC
            PENC  FNR NPC
Subjt:  VIKKPENCDIFNRRNPC

A0A6J1KBP5 uncharacterized protein LOC1114928546.2e-1952.59Show/hide
Query:  AATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKRV
        AA ++IP+ A+ IMILLLNPT SDA                 L+GD + D EFLM +  SR+L  S  FQTS TND NKAS   C R PRYDSCLG K  
Subjt:  AATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKRV

Query:  IKKPENCDIFNRRNPC
           PENC  FNR NPC
Subjt:  IKKPENCDIFNRRNPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTTCATCCAACACCATGGCTGCAACACTGCTGATACCATCAATGGCAATTCCGATCATGATTCTGCTGCTGAACCCAACCATTTCCGATGCGGCCATCAACGA
AACTGCATCCGAGTGGTGCGACGGTGGCCTCGAAAACTGCCTCGTGGGCGACCTGAACTCCGATTGGGAGTTTCTGATGGGGACAGAGAGCAGCCGGATGCTGCGGCAGT
CCATTAAGTTCCAAACTTCCAACACCAACGACCCTAACAAAGCTTCGGTTAAATCATGTGGTCGGCTGCCGCGCTACGACAGCTGCCTTGGCGACAAAAGGGTTATCAAG
AAGCCTGAAAATTGCGACATTTTCAATCGCAGAAATCCCTGTCCGAAGCTCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTTCATCCAACACCATGGCTGCAACACTGCTGATACCATCAATGGCAATTCCGATCATGATTCTGCTGCTGAACCCAACCATTTCCGATGCGGCCATCAACGA
AACTGCATCCGAGTGGTGCGACGGTGGCCTCGAAAACTGCCTCGTGGGCGACCTGAACTCCGATTGGGAGTTTCTGATGGGGACAGAGAGCAGCCGGATGCTGCGGCAGT
CCATTAAGTTCCAAACTTCCAACACCAACGACCCTAACAAAGCTTCGGTTAAATCATGTGGTCGGCTGCCGCGCTACGACAGCTGCCTTGGCGACAAAAGGGTTATCAAG
AAGCCTGAAAATTGCGACATTTTCAATCGCAGAAATCCCTGTCCGAAGCTCCTCTAA
Protein sequenceShow/hide protein sequence
MGFSSNTMAATLLIPSMAIPIMILLLNPTISDAAINETASEWCDGGLENCLVGDLNSDWEFLMGTESSRMLRQSIKFQTSNTNDPNKASVKSCGRLPRYDSCLGDKRVIK
KPENCDIFNRRNPCPKLL