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Lag0000386 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000386
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionE2 ubiquitin-conjugating enzyme
Genome locationchr4:5551929..5554184
RNA-Seq ExpressionLag0000386
SyntenyLag0000386
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
InterPro domainsIPR000608 - Ubiquitin-conjugating enzyme E2
IPR016135 - Ubiquitin-conjugating enzyme/RWD-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152466.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X1 [Cucumis sativus]4.2e-1660Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEM+D GLSEFNV+FNGPKE++YEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

XP_011651465.1 ubiquitin-conjugating enzyme E2-23 kDa isoform X2 [Cucumis sativus]4.2e-1660Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEM+D GLSEFNV+FNGPKE++YEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

XP_022137204.1 ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Momordica charantia]1.9e-1661.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

XP_022137205.1 ubiquitin-conjugating enzyme E2-23 kDa-like isoform X2 [Momordica charantia]1.9e-1661.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

XP_022954942.1 ubiquitin-conjugating enzyme E2-23 kDa-like [Cucurbita moschata]4.2e-1661.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEMVD GL EFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

TrEMBL top hitse value%identityAlignment
A0A1S3AVD3 ubiquitin-conjugating enzyme E2-23 kDa-like2.0e-1660Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEM+D GLSEFNV+FNGPKE++YEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

A0A6J1C614 ubiquitin-conjugating enzyme E2-23 kDa-like isoform X29.0e-1761.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

A0A6J1C6K5 ubiquitin-conjugating enzyme E2-23 kDa-like isoform X19.0e-1761.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEM+D GLSEFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

A0A6J1GUH1 ubiquitin-conjugating enzyme E2-23 kDa-like2.0e-1661.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEMVD GL EFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

A0A6J1JWI6 ubiquitin-conjugating enzyme E2-23 kDa-like2.0e-1661.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVEMVD GL EFNV+FNGPKE+LYEGGVWKI VELP AYPYKS     V +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

SwissProt top hitse value%identityAlignment
P16577 Ubiquitin-conjugating enzyme E2-23 kDa4.0e-1464.15Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS
        DL  LMMSDYKV+M++ G+ EF V F+GPK+++Y+GGVWK++VEL  AYPYKS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS

P28263 Ubiquitin-conjugating enzyme E2-24 kDa9.3e-1141.18Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  L+MSD++V++++  + EF+VKF GPK+  YE GVW++ VELP  YPYKS     V +    ++ ++  G I   VI ++WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

P42748 Ubiquitin-conjugating enzyme E2 44.3e-1651.76Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVE ++ G+ EF V+FNGPK++LY+GGVWKI+VELP AYPYKS     + +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

P42749 Ubiquitin-conjugating enzyme E2 51.9e-1652.94Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        DL  LMMSDYKVEM++ G+ EF V+F+GPK+++YEGGVWKI+VELP AYPYKS     + +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

P42750 Ubiquitin-conjugating enzyme E2 61.0e-1264.15Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS
        D+  LMMSDYKV+ V+  L  F V F+GP ++LY+GGVWKI+VELP AYPYKS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS

Arabidopsis top hitse value%identityAlignment
AT1G55250.1 histone mono-ubiquitination 21.2e-0555.81Show/hide
Query:  MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQALETLLVGK
        MASTLSKEM MME+QLKRWK+T  + + + E+ Q+L   L  K
Subjt:  MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQALETLLVGK

AT1G55250.3 histone mono-ubiquitination 23.5e-0561.11Show/hide
Query:  MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQAL
        MASTLSKEM MME+QLKRWK+T  + + + E+ Q+L
Subjt:  MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQAL

AT1G63800.1 ubiquitin-conjugating enzyme 51.4e-1752.94Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        DL  LMMSDYKVEM++ G+ EF V+F+GPK+++YEGGVWKI+VELP AYPYKS     + +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS

AT2G46030.1 ubiquitin-conjugating enzyme 67.1e-1464.15Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS
        D+  LMMSDYKV+ V+  L  F V F+GP ++LY+GGVWKI+VELP AYPYKS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKS

AT5G41340.1 ubiquitin conjugating enzyme 43.1e-1751.76Show/hide
Query:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS
        D+  LMMSDYKVE ++ G+ EF V+FNGPK++LY+GGVWKI+VELP AYPYKS     + +    +V+E+  G +   VI  +WS
Subjt:  DLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI---VIPTSWS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAACTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAGCGTTGGAAGGAGACAACTCATGAAGTAGTTTCTGTACATGAGAAAGTGCAGGCACTCGA
GACTTTATTAGTTGGGAAGGTGGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGCCACTTGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGATGATGAGTGACT
ACAAAGTGGAGATGGTAGACGCTGGGCTTAGTGAATTTAATGTCAAATTCAACGGTCCAAAAGAAAACTTGTATGAAGGTGGAGTTTGGAAAATCCAGGTTGAACTACCT
CACGCTTATCCATACAAGTCCTATGTTGATGAACTAGTGATTGAGTGTGTAGGAAAGGATGTTAATGAAGTTAAGGAAGGAGATATTGTGATCCCAACTTCTTGGTCGAG
TGCAGGGAGTGTGTGGATTGCTTATCAAATAAGAGCAATCAGTGTTTTGAACTCCCTTTCAACATTCATGTTTGGTTTTTTGGATTTTCTATCATGTTATTGCACACAAT
CTGTTAGGCTAATGAATCGTGTTGTTTACTGCGTAATCGATATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAACTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAGCGTTGGAAGGAGACAACTCATGAAGTAGTTTCTGTACATGAGAAAGTGCAGGCACTCGA
GACTTTATTAGTTGGGAAGGTGGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGCCACTTGTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGATGATGAGTGACT
ACAAAGTGGAGATGGTAGACGCTGGGCTTAGTGAATTTAATGTCAAATTCAACGGTCCAAAAGAAAACTTGTATGAAGGTGGAGTTTGGAAAATCCAGGTTGAACTACCT
CACGCTTATCCATACAAGTCCTATGTTGATGAACTAGTGATTGAGTGTGTAGGAAAGGATGTTAATGAAGTTAAGGAAGGAGATATTGTGATCCCAACTTCTTGGTCGAG
TGCAGGGAGTGTGTGGATTGCTTATCAAATAAGAGCAATCAGTGTTTTGAACTCCCTTTCAACATTCATGTTTGGTTTTTTGGATTTTCTATCATGTTATTGCACACAAT
CTGTTAGGCTAATGAATCGTGTTGTTTACTGCGTAATCGATATCTAA
Protein sequenceShow/hide protein sequence
MASTLSKEMGMMESQLKRWKETTHEVVSVHEKVQALETLLVGKVGVWNLALINLLMPLVGVVFADLECLMMSDYKVEMVDAGLSEFNVKFNGPKENLYEGGVWKIQVELP
HAYPYKSYVDELVIECVGKDVNEVKEGDIVIPTSWSSAGSVWIAYQIRAISVLNSLSTFMFGFLDFLSCYCTQSVRLMNRVVYCVIDI