| GenBank top hits | e value | %identity | Alignment |
|---|
| ADJ18449.1 gag/pol protein, partial [Bryonia dioica] | 3.8e-223 | 62.14 | Show/hide |
Query: CPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMILDNVYIVP
CP+ K K DLLV+ETCLVE D S WILDS GEV+SA AVGD+ LFF ++RY+IL +V VP
Subjt: CPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMILDNVYIVP
Query: KIKRNLISLSCLLEQGYSISFSVNEAFI-----------------------------------------------------TKRGHINLNRIGRLVKSGL
+KRNLIS++C+LE Y+ISF VNE FI + GHINLNRI RLVKSG+
Subjt: KIKRNLISLSCLLEQGYSISFSVNEAFI-----------------------------------------------------TKRGHINLNRIGRLVKSGL
Query: LNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIK
LN+LED+SLPPCESCLEGKMTKR FTGKG AK PLEL+HSDLCGPMN++ARGGYEYFISFIDD+SRYG++YL+HHKSE+FEKFKEYKAEVEN +GKTIK
Subjt: LNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIK
Query: TLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----
TLRSDRGGEYMD FQDYLIE GI SQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYA+ETA++ILN VPSKSV ETP+ELWKGR
Subjt: TLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----
Query: ------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATE---TSTRVVDDTGTSSQS
YPKE+RGG F+ P+ENKV VSTNA FLEEDH R+H+PRSK+VL E+ AT+ +ST+VVD S QS
Subjt: ------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATE---TSTRVVDDTGTSSQS
Query: RPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKV
SQE+R PRRSGRVV QP+RYLGL ET ++IPDDG+EDPLT+KQAM+DVD+++WIKAM+LE+ESM+FNSVW LVD P V+PIGCKWIYKRKRD AGKV
Subjt: RPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKV
Query: QTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
QTFKARLVAKG+TQ+EG+DYEETFSP+AMLKSIRILLSIATFY+YEIWQMDVKT FLNGNL++
Subjt: QTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 5.4e-238 | 65.63 | Show/hide |
Query: STEECPQTNC----VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMI
+ +E +TNC V KK + K DLLVLETCLVEND +AWILDS G+VISA AVGD KLFF ++M
Subjt: STEECPQTNC----VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMI
Query: LDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLN
L+N+YIVPKIKRNL+S+SCL+E YSI+FS+NEAFI K GHINL+
Subjt: LDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLN
Query: RIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAE
RIGRLVK+GLLNKL+D SLPPCESCLEGKMTKRPFTGKGY AKEPLELIHSDLCGPMN++ARGG+EYFISFIDDYSRYGYLYLM HKSEA EKFKEYK E
Subjt: RIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAE
Query: VENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFE
VENLL K IK LRSDRGGEYMDL FQDY+IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVETAV+ILN VPSKSVSETPFE
Subjt: VENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFE
Query: LWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV---
LW+GR YPKETRGG FFDP+EN+V VSTNA FLEEDH+R+HKPRSK+VLSE ++E+T V
Subjt: LWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV---
Query: --VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKW
VD+T TS QS PSQ +R PRRSGRVV QP+RYLGLTET VVIPDDG+EDPL++KQAM+DVDK++W+KAMDLE+ESM+FNSVW+LVD PEGV+PIGCKW
Subjt: --VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKW
Query: IYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
IYKRKRD+AGKVQTFKARLVAKG+TQREG+DYEETFSP+AMLKSIRILLSIATFYDYEIWQMDVKT FLNGNL++
Subjt: IYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 5.6e-235 | 64.99 | Show/hide |
Query: STEECPQTNC---VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMIL
+ +E +TNC + KKN +SK DLLVLETCLVEND +AWILDS G+VISA AVGD KLFF ++M L
Subjt: STEECPQTNC---VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMIL
Query: DNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLNR
+N+YIVPKIKRNL+S+SCL+E YSI+FS+NEAFI K GHINL+R
Subjt: DNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLNR
Query: IGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEV
IGRLVK GLLNKL+D SLPPCESCLEGKMTKRPFTGKGY AKEPLELIHSDLCGPMN++ARG +EYFISFIDDYSRYGYLYLM HKSEA EKFKEYK EV
Subjt: IGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEV
Query: ENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFEL
ENLL K IK RSDRGGEYMDL FQDY+IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVETAV+ILN VPSKSVSETPFEL
Subjt: ENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFEL
Query: WKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV----
W+GR YPKETRGG FFDP+EN+V VSTNA FLEEDH+R+HKPRSK+VLSE ++E+T V
Subjt: WKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV----
Query: -VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWI
VD+T TS QS PSQ +R PRRSGRVV QP+RYLGLTET VVIPDDG+EDPL++KQAM+DVDK++W+KAMDLE+ESM+FNSVW+LVD PEGV+PIGCKWI
Subjt: -VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWI
Query: YKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
YKRKRD+AGKVQTFKARLVAKG+T++EG+DYEETFS +AMLKSIRILLSIA FYDYEIWQMDVKT FLNGNL++
Subjt: YKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-222 | 58.99 | Show/hide |
Query: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
N L+ AK + K C + H +N CP+ +A+K K DLLVLETCLVENDDSAWI+DS
Subjt: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
Query: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
G V+SAIAVG ++L K +++L+NVY+VP +KRNLIS+ CLLEQ YS++F+VN+ FI K
Subjt: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
Query: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
GHINLNRI RLVK+GLL++LE++SLP CESCLEGKMTKRPFTGKG+ AKEPLEL+HSDLCGPMN++ARGG+EY
Subjt: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
Query: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
FI+F DDYSRYGY+YLM HKSEA EKFKEYKAEVEN L KTIKT RSDRGGEYMDL FQ+YL+E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Query: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
A LPNSFWGYAV+TAVYILN VPSKSVSETP +LW GR YPK TRGGYF+DP++NKV VSTNA FL
Subjt: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
Query: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
EEDH+R+HKPRSK+VL+ELS E TE STRVV++ G+S+++ Q +REPRRSGRV P RY+ LTET VI D IEDPLTFK+AM+DVD
Subjt: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
Query: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
K++WIKAM+LE+ESM+FNSVWDLVDQP+GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EG+DYEETFSP+AMLKSIRILLSIA ++DYEIWQMD
Subjt: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
Query: VKTVFLNGNLKK
VKT FLNGNL++
Subjt: VKTVFLNGNLKK
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-222 | 58.99 | Show/hide |
Query: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
N L+ AK + K C + H +N CP+ +A+K K DLLVLETCLVENDDSAWI+DS
Subjt: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
Query: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
G V+SAIAVG ++L K +++L+NVY+VP +KRNLIS+ CLLEQ YS++F+VN+ FI K
Subjt: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
Query: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
GHINLNRI RLVK+GLL++LE++SLP CESCLEGKMTKRPFTGKG+ AKEPLEL+HSDLCGPMN++ARGG+EY
Subjt: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
Query: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
FI+F DDYSRYGY+YLM HKSEA EKFKEYKAEVEN L KTIKT RSDRGGEYMDL FQ+YL+E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Query: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
A LPNSFWGYAV+TAVYILN VPSKSVSETP +LW GR YPK TRGGYF+DP++NKV VSTNA FL
Subjt: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
Query: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
EEDH+R+HKPRSK+VL+ELS E TE STRVV++ G+S+++ Q +REPRRSGRV P RY+ LTET VI D IEDPLTFK+AM+DVD
Subjt: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
Query: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
K++WIKAM+LE+ESM+FNSVWDLVDQP+GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EG+DYEETFSP+AMLKSIRILLSIA ++DYEIWQMD
Subjt: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
Query: VKTVFLNGNLKK
VKT FLNGNL++
Subjt: VKTVFLNGNLKK
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5A7SMH8 Gag/pol protein | 9.0e-223 | 58.99 | Show/hide |
Query: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
N L+ AK + K C + H +N CP+ +A+K K DLLVLETCLVENDDSAWI+DS
Subjt: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
Query: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
G V+SAIAVG ++L K +++L+NVY+VP +KRNLIS+ CLLEQ YS++F+VN+ FI K
Subjt: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
Query: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
GHINLNRI RLVK+GLL++LE++SLP CESCLEGKMTKRPFTGKG+ AKEPLEL+HSDLCGPMN++ARGG+EY
Subjt: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
Query: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
FI+F DDYSRYGY+YLM HKSEA EKFKEYKAEVEN L KTIKT RSDRGGEYMDL FQ+YL+E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Query: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
A LPNSFWGYAV+TAVYILN VPSKSVSETP +LW GR YPK TRGGYF+DP++NKV VSTNA FL
Subjt: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
Query: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
EEDH+R+HKPRSK+VL+ELS E TE STRVV++ G+S+++ Q +REPRRSGRV P RY+ LTET VI D IEDPLTFK+AM+DVD
Subjt: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
Query: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
K++WIKAM+LE+ESM+FNSVWDLVDQP+GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EG+DYEETFSP+AMLKSIRILLSIA ++DYEIWQMD
Subjt: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
Query: VKTVFLNGNLKK
VKT FLNGNL++
Subjt: VKTVFLNGNLKK
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| A0A5A7T2V9 Gag/pol protein | 2.7e-235 | 64.99 | Show/hide |
Query: STEECPQTNC---VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMIL
+ +E +TNC + KKN +SK DLLVLETCLVEND +AWILDS G+VISA AVGD KLFF ++M L
Subjt: STEECPQTNC---VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMIL
Query: DNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLNR
+N+YIVPKIKRNL+S+SCL+E YSI+FS+NEAFI K GHINL+R
Subjt: DNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLNR
Query: IGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEV
IGRLVK GLLNKL+D SLPPCESCLEGKMTKRPFTGKGY AKEPLELIHSDLCGPMN++ARG +EYFISFIDDYSRYGYLYLM HKSEA EKFKEYK EV
Subjt: IGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEV
Query: ENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFEL
ENLL K IK RSDRGGEYMDL FQDY+IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVETAV+ILN VPSKSVSETPFEL
Subjt: ENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFEL
Query: WKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV----
W+GR YPKETRGG FFDP+EN+V VSTNA FLEEDH+R+HKPRSK+VLSE ++E+T V
Subjt: WKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV----
Query: -VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWI
VD+T TS QS PSQ +R PRRSGRVV QP+RYLGLTET VVIPDDG+EDPL++KQAM+DVDK++W+KAMDLE+ESM+FNSVW+LVD PEGV+PIGCKWI
Subjt: -VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWI
Query: YKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
YKRKRD+AGKVQTFKARLVAKG+T++EG+DYEETFS +AMLKSIRILLSIA FYDYEIWQMDVKT FLNGNL++
Subjt: YKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
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| A0A5A7TZD0 Gag/pol protein | 2.6e-238 | 65.63 | Show/hide |
Query: STEECPQTNC----VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMI
+ +E +TNC V KK + K DLLVLETCLVEND +AWILDS G+VISA AVGD KLFF ++M
Subjt: STEECPQTNC----VAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMI
Query: LDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLN
L+N+YIVPKIKRNL+S+SCL+E YSI+FS+NEAFI K GHINL+
Subjt: LDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR-------------------------------------------------------GHINLN
Query: RIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAE
RIGRLVK+GLLNKL+D SLPPCESCLEGKMTKRPFTGKGY AKEPLELIHSDLCGPMN++ARGG+EYFISFIDDYSRYGYLYLM HKSEA EKFKEYK E
Subjt: RIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAE
Query: VENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFE
VENLL K IK LRSDRGGEYMDL FQDY+IEHGI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYAVETAV+ILN VPSKSVSETPFE
Subjt: VENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFE
Query: LWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV---
LW+GR YPKETRGG FFDP+EN+V VSTNA FLEEDH+R+HKPRSK+VLSE ++E+T V
Subjt: LWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATETSTRV---
Query: --VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKW
VD+T TS QS PSQ +R PRRSGRVV QP+RYLGLTET VVIPDDG+EDPL++KQAM+DVDK++W+KAMDLE+ESM+FNSVW+LVD PEGV+PIGCKW
Subjt: --VDDTGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKW
Query: IYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
IYKRKRD+AGKVQTFKARLVAKG+TQREG+DYEETFSP+AMLKSIRILLSIATFYDYEIWQMDVKT FLNGNL++
Subjt: IYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
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| A0A5D3CPJ6 Gag/pol protein | 9.0e-223 | 58.99 | Show/hide |
Query: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
N L+ AK + K C + H +N CP+ +A+K K DLLVLETCLVENDDSAWI+DS
Subjt: NVCALSNAKLNGLVHSTKNTCLNAK---HVAKNLGLVSTEECPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS--------------------
Query: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
G V+SAIAVG ++L K +++L+NVY+VP +KRNLIS+ CLLEQ YS++F+VN+ FI K
Subjt: ----------GEVISAIAVGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITKR----------------------------
Query: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
GHINLNRI RLVK+GLL++LE++SLP CESCLEGKMTKRPFTGKG+ AKEPLEL+HSDLCGPMN++ARGG+EY
Subjt: ---------------------------GHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEY
Query: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
FI+F DDYSRYGY+YLM HKSEA EKFKEYKAEVEN L KTIKT RSDRGGEYMDL FQ+YL+E GI SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Subjt: FISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSY
Query: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
A LPNSFWGYAV+TAVYILN VPSKSVSETP +LW GR YPK TRGGYF+DP++NKV VSTNA FL
Subjt: AQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----------------------------------YPKETRGGYFFDPEENKVLVSTNAPFL
Query: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
EEDH+R+HKPRSK+VL+ELS E TE STRVV++ G+S+++ Q +REPRRSGRV P RY+ LTET VI D IEDPLTFK+AM+DVD
Subjt: EEDHLRDHKPRSKVVLSELSNEATETSTRVVDD---------TGTSSQSRPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVD
Query: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
K++WIKAM+LE+ESM+FNSVWDLVDQP+GV+PIGCKWIYKRKR A GKVQTFKARLVAKG+TQ EG+DYEETFSP+AMLKSIRILLSIA ++DYEIWQMD
Subjt: KNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMD
Query: VKTVFLNGNLKK
VKT FLNGNL++
Subjt: VKTVFLNGNLKK
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| E2GK51 Gag/pol protein (Fragment) | 1.8e-223 | 62.14 | Show/hide |
Query: CPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMILDNVYIVP
CP+ K K DLLV+ETCLVE D S WILDS GEV+SA AVGD+ LFF ++RY+IL +V VP
Subjt: CPQTNCVAKKNMIHDSKCDLLVLETCLVENDDSAWILDS------------------------------GEVISAIAVGDIKLFFTKERYMILDNVYIVP
Query: KIKRNLISLSCLLEQGYSISFSVNEAFI-----------------------------------------------------TKRGHINLNRIGRLVKSGL
+KRNLIS++C+LE Y+ISF VNE FI + GHINLNRI RLVKSG+
Subjt: KIKRNLISLSCLLEQGYSISFSVNEAFI-----------------------------------------------------TKRGHINLNRIGRLVKSGL
Query: LNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIK
LN+LED+SLPPCESCLEGKMTKR FTGKG AK PLEL+HSDLCGPMN++ARGGYEYFISFIDD+SRYG++YL+HHKSE+FEKFKEYKAEVEN +GKTIK
Subjt: LNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIK
Query: TLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----
TLRSDRGGEYMD FQDYLIE GI SQLSAP TPQQNGVSERRNRTLLDMVRSMMSYAQLP+SFWGYA+ETA++ILN VPSKSV ETP+ELWKGR
Subjt: TLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGR-----
Query: ------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATE---TSTRVVDDTGTSSQS
YPKE+RGG F+ P+ENKV VSTNA FLEEDH R+H+PRSK+VL E+ AT+ +ST+VVD S QS
Subjt: ------------------------------YPKETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKVVLSELSNEATE---TSTRVVDDTGTSSQS
Query: RPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKV
SQE+R PRRSGRVV QP+RYLGL ET ++IPDDG+EDPLT+KQAM+DVD+++WIKAM+LE+ESM+FNSVW LVD P V+PIGCKWIYKRKRD AGKV
Subjt: RPSQEIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKV
Query: QTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
QTFKARLVAKG+TQ+EG+DYEETFSP+AMLKSIRILLSIATFY+YEIWQMDVKT FLNGNL++
Subjt: QTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.7e-54 | 27.48 | Show/hide |
Query: FTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAF---ITKRGHIN------LNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPF---
F K I N +V K L ++ + Q YSI+ F + GHI+ + R LLN LE S CE CL GK + PF
Subjt: FTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAF---ITKRGHIN------LNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPF---
Query: TGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGIT
K + K PL ++HSD+CGP+ YF+ F+D ++ Y YL+ +KS+ F F+++ A+ E + L D G EY+ + + ++ GI+
Subjt: TGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGIT
Query: SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSV---SETPFELWKGRYPK---------------ETRGGYFFD
L+ P TPQ NGVSER RT+ + R+M+S A+L SFWG AV TA Y++N +PS+++ S+TP+E+W + P + + G F D
Subjt: SQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSV---SETPFELWKGRYPK---------------ETRGGYFFD
Query: --------------------------------------------------------------PEENKVLVSTNAP----------FLEEDHLRDHK----
P +++ ++ T P FL++ ++K
Subjt: --------------------------------------------------------------PEENKVLVSTNAP----------FLEEDHLRDHK----
Query: PRSKVVLSELSNEA--------------------TETSTRVVDD-------TGTSSQSRPSQE--------IREP----------RRSGRVVRQPDRYLG
K++ +E NE+ E+ R DD +G ++SR S+ I P RRS R+ +P
Subjt: PRSKVVLSELSNEA--------------------TETSTRVVDD-------TGTSSQSRPSQE--------IREP----------RRSGRVVRQPDRYLG
Query: LTE---TPVVIPDDGI--EDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGID
+ VV+ I + P +F + DK+ W +A++ E+ + N+ W + +PE + +W++ K + G +KARLVA+GFTQ+ ID
Subjt: LTE---TPVVIPDDGI--EDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGID
Query: YEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
YEETF+P+A + S R +LS+ Y+ ++ QMDVKT FLNG LK+
Subjt: YEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNLKK
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.1e-79 | 32.84 | Show/hide |
Query: VGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITK-----------------------------------------RGHINL
+GDI + ++L +V VP ++ NLIS L GY F+ + +TK GH++
Subjt: VGDIKLFFTKERYMILDNVYIVPKIKRNLISLSCLLEQGYSISFSVNEAFITK-----------------------------------------RGHINL
Query: NRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKA
+ L K L++ + ++ PC+ CL GK + F L+L++SD+CGPM I + GG +YF++FIDD SR ++Y++ K + F+ F+++ A
Subjt: NRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKA
Query: EVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVS-ETP
VE G+ +K LRSD GGEY F++Y HGI + + PGTPQ NGV+ER NRT+++ VRSM+ A+LP SFWG AV+TA Y++N PS ++ E P
Subjt: EVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVS-ETP
Query: FELWKGR-----------------YPKETR--------------------GGYFFDPEENKVLVSTNAPFLEED--HLRDHKPRSK-------VVLSELS
+W + PKE R G +DP + KV+ S + F E + D + K V + S
Subjt: FELWKGR-----------------YPKETR--------------------GGYFFDPEENKVLVSTNAPFLEED--HLRDHKPRSK-------VVLSELS
Query: NEAT--ETSTRVVD----------------DTGTSSQSRPSQ--EIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMD
N T E++T V D G P+Q E +P R R R TE V+I DD +P + K+ + +KN+ +KAM
Subjt: NEAT--ETSTRVVD----------------DTGTSSQSRPSQ--EIREPRRSGRVVRQPDRYLGLTETPVVIPDDGIEDPLTFKQAMDDVDKNKWIKAMD
Query: LEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGN
E+ES+ N + LV+ P+G RP+ CKW++K K+D K+ +KARLV KGF Q++GID++E FSP+ + SIR +LS+A D E+ Q+DVKT FL+G+
Subjt: LEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGN
Query: LKK
L++
Subjt: LKK
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| Q12490 Transposon Ty1-BL Gag-Pol polyprotein | 5.1e-21 | 25.37 | Show/hide |
Query: ISAIAVGDIKLFFTKERYMILDNVYIVPKIKRN---LISLSCLLEQGYSISF--SVNEAFITKR----------GHINLNRIGRLVKSGLLNKLEDDSLP
++ +A DI FTK D + P +K +S LL S+ +V+ + T++ H N I +K+ + + +
Subjt: ISAIAVGDIKLFFTKERYMILDNVYIVPKIKRN---LISLSCLLEQGYSISF--SVNEAFITKR----------GHINLNRIGRLVKSGLLNKLEDDSLP
Query: -------PCESCLEGKMTK-RPFTG---KGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSE--AFEKFKEYKAEVENLLGK
C CL GK TK R G K + EP + +H+D+ GP++ + YFISF D+ +++ ++Y +H + E + F A ++N
Subjt: -------PCESCLEGKMTK-RPFTG---KGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSE--AFEKFKEYKAEVENLLGK
Query: TIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGRYP
++ ++ DRG EY + + +L ++GIT + + +GV+ER NRTLLD R+ + + LPN W A+E + + N + S ++
Subjt: TIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVSETPFELWKGRYP
Query: KETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKV
++ G D +ST PF + + DH P SK+
Subjt: KETRGGYFFDPEENKVLVSTNAPFLEEDHLRDHKPRSKV
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.4e-39 | 25.56 | Show/hide |
Query: CESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYM
C CL K K PF+ + PLE I+SD+ I + Y Y++ F+D ++RY +LY + KS+ E F +K +EN I T SD GGE++
Subjt: CESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYLYLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYM
Query: DLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVS-ETPFELWKGRYPKE-----------
L +Y +HGI+ S P TP+ NG+SER++R +++ +++S+A +P ++W YA AVY++N +P+ + E+PF+ G P
Subjt: DLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVETAVYILNVVPSKSVS-ETPFELWKGRYPKE-----------
Query: -------------------------TRGGYF----------------FDP-------------------EENKVLVSTN-----------APFLEEDHLR
T+ Y FD E+ + S + AP + H
Subjt: -------------------------TRGGYF----------------FDP-------------------EENKVLVSTN-----------APFLEEDHLR
Query: DHKP--------RSKVVLSEL------------------------SNEATETSTRVVDDTGTS-------SQSRPSQEIREPRRSGRVVRQPDRYLGLTE
P S+V S L + + T+T T+ TS S S+ +Q + P +S P +
Subjt: DHKP--------RSKVVLSEL------------------------SNEATETSTRVVDDTGTS-------SQSRPSQEIREPRRSGRVVRQPDRYLGLTE
Query: TPVVIPDDGIEDPLTFKQ--------------------------------------------AMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEG-VR
T P I P Q A+ + +W AM EI + N WDLV P V
Subjt: TPVVIPDDGIEDPLTFKQ--------------------------------------------AMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEG-VR
Query: PIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNL
+GC+WI+ +K ++ G + +KARLVAKG+ QR G+DY ETFSP+ SIRI+L +A + I Q+DV FL G L
Subjt: PIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIATFYDYEIWQMDVKTVFLNGNL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 8.0e-43 | 25.84 | Show/hide |
Query: SFSVNEAFITKRGHINLNRIGRLVKSGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYL
S + + ++ ++ GH +L + ++ + L L L C C K K PF+ + +PLE I+SD+ I + Y Y++ F+D ++RY +L
Subjt: SFSVNEAFITKRGHINLNRIGRLVKSGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNIRARGGYEYFISFIDDYSRYGYL
Query: YLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVET
Y + KS+ + F +K+ VEN I TL SD GGE++ L +DYL +HGI+ S P TP+ NG+SER++R +++M +++S+A +P ++W YA
Subjt: YLMHHKSEAFEKFKEYKAEVENLLGKTIKTLRSDRGGEYMDLSFQDYLIEHGITSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPNSFWGYAVET
Query: AVYILNVVPSKSVS-ETPFELWKGRYPKE------------------------------------TRGGYF---------------------FDPEENKV
AVY++N +P+ + ++PF+ G+ P T+ Y F
Subjt: AVYILNVVPSKSVS-ETPFELWKGRYPKE------------------------------------TRGGYF---------------------FDPEENKV
Query: LVSTN-------------------------APFLEEDHLRDHKPR-------------------SKVVLSELSNEATETSTRVVDDTGTSSQSRPSQE--
VST+ AP HL D PR S + S S+E T S T Q++ S
Subjt: LVSTN-------------------------APFLEEDHLRDHKPR-------------------SKVVLSELSNEATETSTRVVDDTGTSSQSRPSQE--
Query: --IREPRRSGRVVRQPDRYLGLTETPVVIP----------------------------------------------------DDGI--------------
+ P + P++ L ++P+ P DGI
Subjt: --IREPRRSGRVVRQPDRYLGLTETPVVIP----------------------------------------------------DDGI--------------
Query: --EDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLV-DQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIR
+P T QAM D ++W +AM EI + N WDLV P V +GC+WI+ +K ++ G + +KARLVAKG+ QR G+DY ETFSP+ SIR
Subjt: --EDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLV-DQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIR
Query: ILLSIATFYDYEIWQMDVKTVFLNGNL
I+L +A + I Q+DV FL G L
Subjt: ILLSIATFYDYEIWQMDVKTVFLNGNL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.2e-27 | 42.74 | Show/hide |
Query: EDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILL
++P T+ +A + + W AMD EI +M W++ P +PIGCKW+YK K ++ G ++ +KARLVAKG+TQ+EGID+ ETFSP+ L S++++L
Subjt: EDPLTFKQAMDDVDKNKWIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILL
Query: SIATFYDYEIWQMDVKTVFLNGNL
+I+ Y++ + Q+D+ FLNG+L
Subjt: SIATFYDYEIWQMDVKTVFLNGNL
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 6.8e-05 | 32.35 | Show/hide |
Query: TKRGHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNI
++ H++ + LVK G L+ + SL CE C+ GK + F+ + K PL+ +HSDL G ++
Subjt: TKRGHINLNRIGRLVKSGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYCAKEPLELIHSDLCGPMNI
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 8.6e-16 | 43.02 | Show/hide |
Query: WIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIA
W +AM E++++ N W LV P +GCKW++K K + G + KARLVAKGF Q EGI + ET+SP+ +IR +L++A
Subjt: WIKAMDLEIESMHFNSVWDLVDQPEGVRPIGCKWIYKRKRDAAGKVQTFKARLVAKGFTQREGIDYEETFSPIAMLKSIRILLSIA
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