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Lag0000397 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000397
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr4:6031841..6032444
RNA-Seq ExpressionLag0000397
SyntenyLag0000397
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]1.4e-2137.36Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   + + S+K+EF+  EA  + H HNDALV+TL IANAKVH++LVDGGSSTD+ S TA+ AM LG + L+SSLTPL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  GV  + G+Q++SRECY+ +++  D+
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

XP_022150858.1 uncharacterized protein LOC111018902 [Momordica charantia]2.4e-1834.48Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   ++E   K+EF   E   I+H HNDALV+ L IANAKVH +LVDGGSS D++S TA+  M LG   L+SS  PL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  G+  + G+Q++SRECY+ ++K  D+
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]7.1e-1834.48Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   +    + +EF+  EA  + H HNDALV+TL IAN KVH++LVDGGSS D++S TA+ AM LG   L+SS  PL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  GV  + G+Q++SRECY  ++++ DR
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

XP_022155873.1 uncharacterized protein LOC111022886 [Momordica charantia]3.8e-1936.47Show/hide
Query:  LLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE--------------------
        +++E   KLEF+  EA  ++H HNDALV+TL IANAKVH++LVDGGSST ++S TA+ AM LG   L+SS  PL+GFGGE                    
Subjt:  LLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE--------------------

Query:  ---------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                               KFPT  G+  + G+Q++ RECY  ++K  DR
Subjt:  ---------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]5.4e-1833.91Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   + +  + +EF+  EA  ++H HNDALV+TL IAN KVH++LVDGGSS D++S TA+ AM L    L+SS  PL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  GV  + G+Q++SRECY+ +++  DR
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159016.7e-2237.36Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   + + S+K+EF+  EA  + H HNDALV+TL IANAKVH++LVDGGSSTD+ S TA+ AM LG + L+SSLTPL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  GV  + G+Q++SRECY+ +++  D+
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

A0A6J1DAK4 uncharacterized protein LOC1110189021.2e-1834.48Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   ++E   K+EF   E   I+H HNDALV+ L IANAKVH +LVDGGSS D++S TA+  M LG   L+SS  PL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  G+  + G+Q++SRECY+ ++K  D+
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

A0A6J1DP33 uncharacterized protein LOC1110228861.8e-1936.47Show/hide
Query:  LLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE--------------------
        +++E   KLEF+  EA  ++H HNDALV+TL IANAKVH++LVDGGSST ++S TA+ AM LG   L+SS  PL+GFGGE                    
Subjt:  LLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE--------------------

Query:  ---------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                               KFPT  G+  + G+Q++ RECY  ++K  DR
Subjt:  ---------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

A0A6J1DQY2 uncharacterized protein LOC1110223213.4e-1834.48Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   +    + +EF+  EA  + H HNDALV+TL IAN KVH++LVDGGSS D++S TA+ AM LG   L+SS  PL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  GV  + G+Q++SRECY  ++++ DR
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

A0A6J1DRG9 uncharacterized protein LOC1110235872.6e-1833.91Show/hide
Query:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------
        +Y   + +  + +EF+  EA  ++H HNDALV+TL IAN KVH++LVDGGSS D++S TA+ AM L    L+SS  PL+GFGGE                
Subjt:  MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGE----------------

Query:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR
                                                   KFPT  GV  + G+Q++SRECY+ +++  DR
Subjt:  -------------------------------------------KFPTEEGVRAVYGKQKMSRECYFMALKNTDR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCGCTCCTACTCGATGAAAACTCACTAAAATTAGAGTTTACATCGAAAGAGGCTGTGGGTATATACCATCTACACAATGACGCGCTGGTGGTCACCCTAACGAT
TGCCAACGCAAAAGTTCACCAGGTCCTCGTTGATGGAGGGAGTTCTACTGATGTTCTATCAACCACTGCGTTCAATGCCATGAAGCTGGGAAGCGATCACCTGAGGTCGA
GCCTCACACCGTTGTTGGGGTTTGGCGGAGAAAAATTCCCAACCGAAGAAGGTGTAAGGGCGGTGTATGGCAAGCAGAAGATGTCGAGGGAATGCTACTTTATGGCACTC
AAAAACACCGACAGAAAGGTTCAAGCAACATCCGCCTCGAGAGATGGCCAAGGCCGAGCATTTGAGGGATCAAGCTATCTCCTTCCAATGGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTACTCGCTCCTACTCGATGAAAACTCACTAAAATTAGAGTTTACATCGAAAGAGGCTGTGGGTATATACCATCTACACAATGACGCGCTGGTGGTCACCCTAACGAT
TGCCAACGCAAAAGTTCACCAGGTCCTCGTTGATGGAGGGAGTTCTACTGATGTTCTATCAACCACTGCGTTCAATGCCATGAAGCTGGGAAGCGATCACCTGAGGTCGA
GCCTCACACCGTTGTTGGGGTTTGGCGGAGAAAAATTCCCAACCGAAGAAGGTGTAAGGGCGGTGTATGGCAAGCAGAAGATGTCGAGGGAATGCTACTTTATGGCACTC
AAAAACACCGACAGAAAGGTTCAAGCAACATCCGCCTCGAGAGATGGCCAAGGCCGAGCATTTGAGGGATCAAGCTATCTCCTTCCAATGGAACATTGA
Protein sequenceShow/hide protein sequence
MYSLLLDENSLKLEFTSKEAVGIYHLHNDALVVTLTIANAKVHQVLVDGGSSTDVLSTTAFNAMKLGSDHLRSSLTPLLGFGGEKFPTEEGVRAVYGKQKMSRECYFMAL
KNTDRKVQATSASRDGQGRAFEGSSYLLPMEH