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Lag0000415 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000415
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr4:6671764..6674523
RNA-Seq ExpressionLag0000415
SyntenyLag0000415
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051847.1 gag/pol protein [Cucumis melo var. makuwa]9.9e-2960.71Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECP +P  NA++  R+AY+RW KANEK R YI  SL++VLAK++E++ TTREIM SLQEMFG  SYQ+ H+ALK++YNARM E  SV EHVL MM  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERS
        AE N  V+ E S
Subjt:  AEANDEVVCERS

KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-2958.41Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECPP PT NASQ+ +DAYD WTKAN+K  +Y+  SL+++L+K++E + T R+IM SL+EMFG PS Q+  EA+K+VYNARM E QSV EHVLGM+  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERSQ
        AE N  +  E+SQ
Subjt:  AEANDEVVCERSQ

TYK15919.1 gag/pol protein [Cucumis melo var. makuwa]5.8e-2958.41Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECPP PT NASQ+ +DAYD WTKAN+K  +Y+  SL+++L+K++E + T R+IM SL+EMFG PS Q+  EA+K+VYNARM E QSV EHVLGM+  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERSQ
        AE N  +  E+SQ
Subjt:  AEANDEVVCERSQ

XP_008464721.1 PREDICTED: uncharacterized protein LOC103502537 [Cucumis melo]9.9e-2960.71Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECP +P  NA++  R+AY+RW KANEK R YI  SL++VLAK++E++ TTREIM SLQEMFG  SYQ+ H+ALK++YNARM E  SV EHVL MM  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERS
        AE N  V+ E S
Subjt:  AEANDEVVCERS

XP_022158568.1 uncharacterized protein LOC111025021 [Momordica charantia]1.2e-2957.14Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECPP P  NA++  RDAYDRW KANEK RVYI  S++EVL+K++E + TTREIM SLQ +FG PS  L H+A+K+VYN RM E  SV EHVL MM  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERSQALTSNNNAPLCFF
        AE ND V+ E SQ      + P  +F
Subjt:  AEANDEVVCERSQALTSNNNAPLCFF

TrEMBL top hitse value%identityAlignment
A0A1S3CM79 uncharacterized protein LOC1035025374.8e-2960.71Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECP +P  NA++  R+AY+RW KANEK R YI  SL++VLAK++E++ TTREIM SLQEMFG  SYQ+ H+ALK++YNARM E  SV EHVL MM  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERS
        AE N  V+ E S
Subjt:  AEANDEVVCERS

A0A5A7UBR0 Gag/pol protein4.8e-2960.71Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECP +P  NA++  R+AY+RW KANEK R YI  SL++VLAK++E++ TTREIM SLQEMFG  SYQ+ H+ALK++YNARM E  SV EHVL MM  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERS
        AE N  V+ E S
Subjt:  AEANDEVVCERS

A0A5A7VA67 Gag/pol protein2.8e-2958.41Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECPP PT NASQ+ +DAYD WTKAN+K  +Y+  SL+++L+K++E + T R+IM SL+EMFG PS Q+  EA+K+VYNARM E QSV EHVLGM+  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERSQ
        AE N  +  E+SQ
Subjt:  AEANDEVVCERSQ

A0A5D3D0D9 Gag/pol protein2.8e-2958.41Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECPP PT NASQ+ +DAYD WTKAN+K  +Y+  SL+++L+K++E + T R+IM SL+EMFG PS Q+  EA+K+VYNARM E QSV EHVLGM+  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERSQ
        AE N  +  E+SQ
Subjt:  AEANDEVVCERSQ

A0A6J1DWG6 uncharacterized protein LOC1110250215.7e-3057.14Show/hide
Query:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI
        ECPP P  NA++  RDAYDRW KANEK RVYI  S++EVL+K++E + TTREIM SLQ +FG PS  L H+A+K+VYN RM E  SV EHVL MM  FN+
Subjt:  ECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNI

Query:  AEANDEVVCERSQALTSNNNAPLCFF
        AE ND V+ E SQ      + P  +F
Subjt:  AEANDEVVCERSQALTSNNNAPLCFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACGGAATGTCCTCCAATCCCTACTCACAATGCATCCCAAGCATCAAGGGATGCATACGACCGATGGACAAAGGCCAACGAAAAGACTCGCGTCTACATTTTTGT
CAGCTTGACTGAAGTATTGGCCAAAAGGTATGAGAACGTGGAAACAACGAGGGAGATTATGTATTCCCTCCAGGAGATGTTTGGATTTCCATCCTACCAGCTCCACCACG
AGGCTCTCAAACATGTCTACAATGCCCGCATGATGGAGGATCAGTCAGTTTGGGAACATGTTCTCGGCATGATGAACCAATTCAATATTGCTGAGGCAAACGACGAGGTC
GTGTGTGAGAGAAGTCAGGCCTTGACTTCGAACAATAATGCCCCTTTGTGCTTCTTTTTCATGTCGTCAACAAGTCACTTTGATGACTATAGTATCCTGCACGGGTGGTC
ACCAAACTCGCCTACAGCAGTTGTCATCAGACTTGCAGTGATTTACCACCTGTCTAGACCAGTCACTTTGATGACTGTAGTATCCTGTAGGGGTGCTCACCAATTCGCCG
TATCCTGCATGGGTGGTCACCAGGCTCGCCTACAACGATCTTCACCAAATTCATGTGCAGTGACTTCACCTCCTGTCAAGACCAGTTACTTTGATGATTGTAATGTTTTA
AAGCGAAGACTTCAACTGTCAACTTTCGAATATGAAGCATCGACCTATTGGCTTGATGATCTGTTGGGTCCATTTGCTAGCTTGTTGATACTCTTGGATGATCGGCCTGC
TGACTTGTTGATCTTCTTGATCGGCCGGCTGGCTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATACGGAATGTCCTCCAATCCCTACTCACAATGCATCCCAAGCATCAAGGGATGCATACGACCGATGGACAAAGGCCAACGAAAAGACTCGCGTCTACATTTTTGT
CAGCTTGACTGAAGTATTGGCCAAAAGGTATGAGAACGTGGAAACAACGAGGGAGATTATGTATTCCCTCCAGGAGATGTTTGGATTTCCATCCTACCAGCTCCACCACG
AGGCTCTCAAACATGTCTACAATGCCCGCATGATGGAGGATCAGTCAGTTTGGGAACATGTTCTCGGCATGATGAACCAATTCAATATTGCTGAGGCAAACGACGAGGTC
GTGTGTGAGAGAAGTCAGGCCTTGACTTCGAACAATAATGCCCCTTTGTGCTTCTTTTTCATGTCGTCAACAAGTCACTTTGATGACTATAGTATCCTGCACGGGTGGTC
ACCAAACTCGCCTACAGCAGTTGTCATCAGACTTGCAGTGATTTACCACCTGTCTAGACCAGTCACTTTGATGACTGTAGTATCCTGTAGGGGTGCTCACCAATTCGCCG
TATCCTGCATGGGTGGTCACCAGGCTCGCCTACAACGATCTTCACCAAATTCATGTGCAGTGACTTCACCTCCTGTCAAGACCAGTTACTTTGATGATTGTAATGTTTTA
AAGCGAAGACTTCAACTGTCAACTTTCGAATATGAAGCATCGACCTATTGGCTTGATGATCTGTTGGGTCCATTTGCTAGCTTGTTGATACTCTTGGATGATCGGCCTGC
TGACTTGTTGATCTTCTTGATCGGCCGGCTGGCTCGTTGA
Protein sequenceShow/hide protein sequence
MDTECPPIPTHNASQASRDAYDRWTKANEKTRVYIFVSLTEVLAKRYENVETTREIMYSLQEMFGFPSYQLHHEALKHVYNARMMEDQSVWEHVLGMMNQFNIAEANDEV
VCERSQALTSNNNAPLCFFFMSSTSHFDDYSILHGWSPNSPTAVVIRLAVIYHLSRPVTLMTVVSCRGAHQFAVSCMGGHQARLQRSSPNSCAVTSPPVKTSYFDDCNVL
KRRLQLSTFEYEASTYWLDDLLGPFASLLILLDDRPADLLIFLIGRLAR