; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000416 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000416
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr4:6686586..6688777
RNA-Seq ExpressionLag0000416
SyntenyLag0000416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043002.1 gag/pol protein [Cucumis melo var. makuwa]6.4e-1955.34Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWINWGS
        +TS  + PSQ L+ P  SGR+V++P+ +YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI  G 
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWINWGS

Query:  SSS
          S
Subjt:  SSS
KAA0065386.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-1859.38Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS  + PSQLL+ P  SGRIV +P+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
TYK15984.1 gag/pol protein [Cucumis melo var. makuwa]3.2e-1858.33Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS  + PSQ L+ P  SGR+V QP+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
TYK20422.1 gag/pol protein [Cucumis melo var. makuwa]1.4e-1858.33Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS+ + PSQ L+ P  SGRIV QP+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNS+           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
TYK28868.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-1859.38Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS  + PSQLL+ P  SGRIV +P+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
TrEMBL top hitse value%identityAlignment
A0A5A7TI08 Gag/pol protein3.1e-1955.34Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWINWGS
        +TS  + PSQ L+ P  SGR+V++P+ +YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI  G 
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWINWGS

Query:  SSS
          S
Subjt:  SSS
A0A5A7TZD0 Gag/pol protein1.5e-1858.33Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS  + PSQ L+ P  SGR+V QP+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
A0A5A7VGC7 Gag/pol protein5.3e-1959.38Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS  + PSQLL+ P  SGRIV +P+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
A0A5D3DA25 Gag/pol protein7.0e-1958.33Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS+ + PSQ L+ P  SGRIV QP+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNS+           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
A0A5D3DZH9 Gag/pol protein5.3e-1959.38Show/hide
Query:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
        +TS  + PSQLL+ P  SGRIV +P+  YL LTET +VI DD VEDPL++KQAM+D+DKD+W+KAMDLEMESMYFNSV           P+  KWI
Subjt:  STSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSV-----------PLDGKWI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATGGGTTCGATTCCCCATCGAGGACCCTCAACAAGTCTCGTCACCCGTCCTTCTCAATTGTTGAAAGATCCTGGACCTAGTGGGAGGATTGTTATTCAACCTGA
TGAGTACTATTTGAGTTTAACTGAAACACCAATCGTCATACTTGATGACGAGGTCGAGGATCCATTAACCTTTAAACAGGCAATGGATGACATGGACAAGGATGAGTGGA
TTAAGGCCATGGACCTAGAAATGGAGTCCATGTACTTTAATTCAGTACCTTTGGATGGGAAATGGATCAACTGGGGATCTTCGTCGTCGGTTTCACCATCCTTCGTCCAT
CAAGACGATGAAGATCCTCCAATTGATCAGTTCCCCGACCATGGTACAGTTGAGAGCAAGTATCCAAGAGTTCTGCCAGACCCGAGTAGTTCGAGGTTCTATTCACTTGA
TGTGGCTGTTGTTGTCAATCAGATCATCTACGTGAAGGGAATAAAAGTCCCCATGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATAC
CGTTACGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATGGGTTCGATTCCCCATCGAGGACCCTCAACAAGTCTCGTCACCCGTCCTTCTCAATTGTTGAAAGATCCTGGACCTAGTGGGAGGATTGTTATTCAACCTGA
TGAGTACTATTTGAGTTTAACTGAAACACCAATCGTCATACTTGATGACGAGGTCGAGGATCCATTAACCTTTAAACAGGCAATGGATGACATGGACAAGGATGAGTGGA
TTAAGGCCATGGACCTAGAAATGGAGTCCATGTACTTTAATTCAGTACCTTTGGATGGGAAATGGATCAACTGGGGATCTTCGTCGTCGGTTTCACCATCCTTCGTCCAT
CAAGACGATGAAGATCCTCCAATTGATCAGTTCCCCGACCATGGTACAGTTGAGAGCAAGTATCCAAGAGTTCTGCCAGACCCGAGTAGTTCGAGGTTCTATTCACTTGA
TGTGGCTGTTGTTGTCAATCAGATCATCTACGTGAAGGGAATAAAAGTCCCCATGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATAC
CGTTACGATAA
Protein sequenceShow/hide protein sequence
MKMGSIPHRGPSTSLVTRPSQLLKDPGPSGRIVIQPDEYYLSLTETPIVILDDEVEDPLTFKQAMDDMDKDEWIKAMDLEMESMYFNSVPLDGKWINWGSSSSVSPSFVH
QDDEDPPIDQFPDHGTVESKYPRVLPDPSSSRFYSLDVAVVVNQIIYVKGIKVPMQRKRIDWTLRRILINIKIPLR