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Lag0000417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:6689067..6689411
RNA-Seq ExpressionLag0000417
SyntenyLag0000417
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]3.1e-0838.76Show/hide
Query:  MGHSSNS-----AAATAAVAVLILTLSASTCKAASPLPLNFVNETVTPVASMWCNGVPEKCLAVEEN----------INFNNIVMKTGNRGSSICGRYYM
        MGHSSNS     AAA AA+ V IL LS S C  ASP P ++ N TV   ASMWC+G  E+C+  E++               I   T NR   +C R   
Subjt:  MGHSSNS-----AAATAAVAVLILTLSASTCKAASPLPLNFVNETVTPVASMWCNGVPEKCLAVEEN----------INFNNIVMKTGNRGSSICGRYYM

Query:  GRYISCIDKDQASSKPPICRNDYDRTCSK
        G Y SC +  + ++K   C   Y R C +
Subjt:  GRYISCIDKDQASSKPPICRNDYDRTCSK

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0636.29Show/hide
Query:  MGHSSNSAA--ATAAVAVLILTLSASTCKAASPLPLNFVNETVTPVASMWCNGVPEKCLAVE----------ENINFNNIVMKTGNRGSSICGRYYMGRY
        MGHSSNS    A AA+ V IL LS S C  ASP P ++ N TV   ASMWC+G  E+C+  E          +      I   + N   ++C R     Y
Subjt:  MGHSSNSAA--ATAAVAVLILTLSASTCKAASPLPLNFVNETVTPVASMWCNGVPEKCLAVE----------ENINFNNIVMKTGNRGSSICGRYYMGRY

Query:  ISCIDKDQASSKPPICRNDYDRTC
         SC +  +++  P  C   Y R C
Subjt:  ISCIDKDQASSKPPICRNDYDRTC

KGN53789.1 hypothetical protein Csa_015152 [Cucumis sativus]1.3e-1751.38Show/hide
Query:  SAAATAAVAVLILTLSAST-CKAASPLPLNFVNETVTPVAS-MWCNGVPEKCLAVEENINFNNIVMKTGNRGSSICGRYYMGRYISCIDKDQASSKPPIC
        +A +T A+ +LILTL+ S+ C AAS LP NF NET+T + S ++CNG+ ++C  VEEN        +TG+R SS+CGR+Y G YI CI   Q S KP  C
Subjt:  SAAATAAVAVLILTLSAST-CKAASPLPLNFVNETVTPVAS-MWCNGVPEKCLAVEENINFNNIVMKTGNRGSSICGRYYMGRYISCIDKDQASSKPPIC

Query:  RNDYDRTCS
        R+ YDRTCS
Subjt:  RNDYDRTCS

TrEMBL top hitse value%identityAlignment
A0A0A0KY59 Uncharacterized protein6.2e-1851.38Show/hide
Query:  SAAATAAVAVLILTLSAST-CKAASPLPLNFVNETVTPVAS-MWCNGVPEKCLAVEENINFNNIVMKTGNRGSSICGRYYMGRYISCIDKDQASSKPPIC
        +A +T A+ +LILTL+ S+ C AAS LP NF NET+T + S ++CNG+ ++C  VEEN        +TG+R SS+CGR+Y G YI CI   Q S KP  C
Subjt:  SAAATAAVAVLILTLSAST-CKAASPLPLNFVNETVTPVAS-MWCNGVPEKCLAVEENINFNNIVMKTGNRGSSICGRYYMGRYISCIDKDQASSKPPIC

Query:  RNDYDRTCS
        R+ YDRTCS
Subjt:  RNDYDRTCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATTCTTCAAACTCCGCCGCCGCAACGGCAGCCGTGGCCGTGCTGATTTTGACGCTGAGCGCAAGCACATGCAAGGCTGCTTCTCCACTTCCTCTCAATTTCGT
CAACGAGACCGTCACTCCTGTGGCATCCATGTGGTGCAATGGCGTCCCCGAAAAATGCCTCGCCGTTGAAGAAAACATTAATTTTAATAACATTGTTATGAAGACCGGAA
ACCGAGGTAGTTCTATATGTGGTCGGTACTATATGGGAAGATATATCAGCTGTATCGACAAGGATCAAGCATCCTCCAAGCCACCAATATGTCGTAACGACTATGACCGC
ACCTGCAGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGACATTCTTCAAACTCCGCCGCCGCAACGGCAGCCGTGGCCGTGCTGATTTTGACGCTGAGCGCAAGCACATGCAAGGCTGCTTCTCCACTTCCTCTCAATTTCGT
CAACGAGACCGTCACTCCTGTGGCATCCATGTGGTGCAATGGCGTCCCCGAAAAATGCCTCGCCGTTGAAGAAAACATTAATTTTAATAACATTGTTATGAAGACCGGAA
ACCGAGGTAGTTCTATATGTGGTCGGTACTATATGGGAAGATATATCAGCTGTATCGACAAGGATCAAGCATCCTCCAAGCCACCAATATGTCGTAACGACTATGACCGC
ACCTGCAGTAAATGA
Protein sequenceShow/hide protein sequence
MGHSSNSAAATAAVAVLILTLSASTCKAASPLPLNFVNETVTPVASMWCNGVPEKCLAVEENINFNNIVMKTGNRGSSICGRYYMGRYISCIDKDQASSKPPICRNDYDR
TCSK