; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000424 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000424
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr4:6891983..6900764
RNA-Seq ExpressionLag0000424
SyntenyLag0000424
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ERM93404.1 hypothetical protein AMTR_s04947p00003620 [Amborella trichopoda]8.5e-2147.46Show/hide
Query:  LNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAA
        +NPI +ADDRAR IR+YAAP     NPGIV+P               +L+  GQF G  +EDPH HL+SFL++ + F I  V+ E L++ LFP+SLRD A
Subjt:  LNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAA

Query:  KVWLNQQPANSIATWNVL
        + WLN  P +S+  WN L
Subjt:  KVWLNQQPANSIATWNVL

ERM93434.1 hypothetical protein AMTR_s03373p00007640 [Amborella trichopoda]1.7e-2146.28Show/hide
Query:  NPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAK
        NPI +ADDRAR IR+YAAP     N GIV+P               +L+  GQFGGS +EDPH H++SFL++ + F +  V+ E L++ LFP+SLRD A+
Subjt:  NPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAK

Query:  VWLNQQPANSIATWNVLEKSS
         WLN  P +S+  WN L ++S
Subjt:  VWLNQQPANSIATWNVLEKSS

KAG8491357.1 hypothetical protein CXB51_014478 [Gossypium anomalum]3.2e-2039.74Show/hide
Query:  VDPVIDRTYHRRRRNRRPRRQP----GEMAAPNQPNRPLNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASED
        VDP I+RT+ +R+R    RR        +   N  N   NPI +ADDR R +R YA P   + NPGI +P               +L+  GQF    +ED
Subjt:  VDPVIDRTYHRRRRNRRPRRQP----GEMAAPNQPNRPLNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASED

Query:  PHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWNVL
        PH HL+ F+++   F +  V  + L++ LFPYSLRD A+ WLN  P+NSI+TW  L
Subjt:  PHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWNVL

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]1.7e-2147.01Show/hide
Query:  NPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAK
        NPI +ADDR R IR+YAAP     NPGIV+P               +L+  GQFGGS +EDPH H++SFL++ + F +  V+ E L++ LFP+SLRD A+
Subjt:  NPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAK

Query:  VWLNQQPANSIATWNVL
         WLN  P +S+  WN L
Subjt:  VWLNQQPANSIATWNVL

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]1.4e-2340.91Show/hide
Query:  VDPVIDRTYHRRRRNRRPRRQ--PGEMAAPNQPNRPLNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPH
        +DP I+RT+ +RR+ ++ +++    +       +   NPI +ADDRAR IR+YAAP     NPGIV+P               +L+  GQFGGS +EDPH
Subjt:  VDPVIDRTYHRRRRNRRPRRQ--PGEMAAPNQPNRPLNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPH

Query:  SHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWNVL
         H++SFL++ + F +  V+ E L++ LFP+SLRD A+ WLN  P +S+  WN L
Subjt:  SHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWNVL

TrEMBL top hitse value%identityAlignment
A0A392NID4 Retrotrans_gag domain-containing protein (Fragment)1.9e-1838.24Show/hide
Query:  EFEVDPVIDRTYHRRRRNRRPRRQPG---------------EMAAPNQPNRPLNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------I
        E+  DP I+RT+   RRN+R     G               +   P       + I +A+DR R IRDYAA      N GIVKP               +
Subjt:  EFEVDPVIDRTYHRRRRNRRPRRQPG---------------EMAAPNQPNRPLNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------I

Query:  LKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWNVL
        L+  GQF  +A+EDPH HLK FL + + F IP +T +  ++ LFPYSLRD  K WLN    N+IA WN L
Subjt:  LKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWNVL

A0A392QG70 Retrotrans_gag domain-containing protein (Fragment)1.2e-1746.43Show/hide
Query:  MADDRARGIRDYAAPANCNFNPGIVKP--------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQ
        +A+D+ R IRDYA       N GI+ P              +L+  GQF G+  EDPH HL+ FLD+ + F IP +T E  ++ LFPYSLRD AK WLN 
Subjt:  MADDRARGIRDYAAPANCNFNPGIVKP--------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQ

Query:  QPANSIATWNVL
           NSIATWN L
Subjt:  QPANSIATWNVL

U5CUI2 Retrotrans_gag domain-containing protein4.1e-2147.46Show/hide
Query:  LNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAA
        +NPI +ADDRAR IR+YAAP     NPGIV+P               +L+  GQF G  +EDPH HL+SFL++ + F I  V+ E L++ LFP+SLRD A
Subjt:  LNPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAA

Query:  KVWLNQQPANSIATWNVL
        + WLN  P +S+  WN L
Subjt:  KVWLNQQPANSIATWNVL

U5CUK7 Uncharacterized protein8.3e-2246.28Show/hide
Query:  NPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAK
        NPI +ADDRAR IR+YAAP     N GIV+P               +L+  GQFGGS +EDPH H++SFL++ + F +  V+ E L++ LFP+SLRD A+
Subjt:  NPIQMADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAK

Query:  VWLNQQPANSIATWNVLEKSS
         WLN  P +S+  WN L ++S
Subjt:  VWLNQQPANSIATWNVLEKSS

W9RHB3 Putative disease resistance RPP13-like protein 15.9e-2040.24Show/hide
Query:  FEVDPVIDRTYHRRRRNRRPRRQPGEMAAPN---------QPNRPLNPIQ---MADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQK
        F  DP I+RT  RRRR +R      EMA  +         Q    L P Q   + DDR R IRD+A P     NP IV+P               +L+  
Subjt:  FEVDPVIDRTYHRRRRNRRPRRQPGEMAAPN---------QPNRPLNPIQ---MADDRARGIRDYAAPANCNFNPGIVKP---------------ILKQK

Query:  GQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWN
        GQF G A++DPH HL+ F+++ + F +P V  E L++ LFP+SLRD A+ W N  PA+SI TWN
Subjt:  GQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTAGTGAATTTTGTATTGCAAAGCTATGTCCCCAACTATCTATCCATGCAAATCAAAGGACAATCCTAAATAAACAGGAGTTCATAGTTAGTTCAGGATTAAG
GACGCCCTCACTCACATGTCTTATACATGAACGATTAGGATCACATTGTTCGTCTTTAGAGAACATAGCGAGTCGTCCCAATAGTGTCCCCAGGATTAAGGTCTTGAACA
AGGAGCCCCGCCCTCCCATTGGCCCGAGAGGGACTTGGTTTGGTGGTTGGACCATAAACCAATTGTTTATTAGAGGATTAATGGGACTTAATGATCAAGAGGACCAATCA
CCCGTTCAAGGGCCAAACAACTACAATTGGCTTTTAATTTCCACATACAAGCAATGGAGCCTCATCACTCTCTTTGAAATTCTTGAAACCAGGGTTGCAAGCTTGGACAT
TCAGGTAGGCGATGGAAGAAAAGAATTTGGAATTGAAATTGAAGAAATTGCGTCTGGGGAGTTGATTCAGGAAATTGAATTCCTAAATTTGTGCCGTGGTTTCATGAAGT
CAGGCAGCATGATTTTTGTTTGGAAGCAAGCTAGTGAAGCAAGAAATCAATCTAACAATGGCGAGGTGCCACAAGGGGAGGGAAAAGAACGACTCTTAGAGCAGATCATG
CGAAATGTGGAAACCATGGTCAATGAGAGGTTGGATAGAATAAAACAAAGGCTTCAAGCAAGATTAAATTCACCAACTGCTTGTGAAATAATCACGAACTACTGCGAACA
CCACCACTATGGTTACACCGGTATGACTCTGAGACTTCTAGAGGTAGGAGACTGGTGGGAGTCTAGAGGGAGCCTTCAGGGGAATTCTCTGAGAACCTACAACTGCACTC
TTCTCACTGCAAATATTTCTGTGTCCACGGATATCGGCCAATGCAGAGTTCCTCTCGGGCTAGGAGAGGACGGCGCGCCTTTGTTCAAGCCCCGGAGTCAGCTCTTAAGG
GAACACACATCTACTTACCCTAATAGGGGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCCCACTTTCGGTCTTGCCCCTGAAATGAAATCTAAACTAGTTAA
CATCGTTACATCTAGTGGTTACTATTTCGCGGTTCGGTCTTATACAAACTCATTACATAGGATACCCCACCCGCATGTCTCCTACATGGATGCTTGGATCATTGCATCTG
TATCGAATATAAGGTGGGTCATATCACATAGTGTTACCAGGATAAGAAGGCCACCTGGTAGAAGAGGAAACTACAACAGGGATCGAGGCTTTGGCAACATTAAAGTTAAA
TTTTCAAAGTTTCATGGTACATCTGACCCTGAAGACTACTTCCAATGGGAACATGAAGTTGGACACATTTTTCATACCAATAGTTTCTCAGAAGAGAAGAAGCGCATGCA
CACTTTCCAAGATGATCAAGAGACAGAAAAAGGCTTAGCGCAAGCGCCTCATGCGGCGATAAGTACAACCTTGCTCCCTGTTGAGTCTTTTTCTCCAGGAACAAGAAATT
GTATGCGTGCCGCCCGACGAATTGAATTCGAGGTAGATCCTGTAATCGATAGAACATACCATAGAAGAAGAAGAAATCGAAGACCTCGAAGGCAACCAGGAGAAATGGCA
GCACCAAACCAACCAAATAGACCATTAAACCCCATCCAGATGGCCGATGATAGGGCCAGAGGAATTAGAGATTATGCAGCCCCTGCAAATTGCAATTTCAATCCAGGGAT
AGTTAAGCCAATTCTAAAACAGAAAGGACAATTTGGAGGAAGTGCATCGGAAGATCCTCACTCTCACCTCAAGTCATTCCTCGACATTTGCAACAAGTTTATAATTCCAA
GAGTTACCCCAGAACAACTTCAAGTCATATTATTTCCTTACTCTCTGCGAGATGCGGCGAAAGTGTGGTTAAACCAGCAACCAGCAAACTCCATCGCAACATGGAATGTT
TTGGAGAAAAGTTCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGTAGTGAATTTTGTATTGCAAAGCTATGTCCCCAACTATCTATCCATGCAAATCAAAGGACAATCCTAAATAAACAGGAGTTCATAGTTAGTTCAGGATTAAG
GACGCCCTCACTCACATGTCTTATACATGAACGATTAGGATCACATTGTTCGTCTTTAGAGAACATAGCGAGTCGTCCCAATAGTGTCCCCAGGATTAAGGTCTTGAACA
AGGAGCCCCGCCCTCCCATTGGCCCGAGAGGGACTTGGTTTGGTGGTTGGACCATAAACCAATTGTTTATTAGAGGATTAATGGGACTTAATGATCAAGAGGACCAATCA
CCCGTTCAAGGGCCAAACAACTACAATTGGCTTTTAATTTCCACATACAAGCAATGGAGCCTCATCACTCTCTTTGAAATTCTTGAAACCAGGGTTGCAAGCTTGGACAT
TCAGGTAGGCGATGGAAGAAAAGAATTTGGAATTGAAATTGAAGAAATTGCGTCTGGGGAGTTGATTCAGGAAATTGAATTCCTAAATTTGTGCCGTGGTTTCATGAAGT
CAGGCAGCATGATTTTTGTTTGGAAGCAAGCTAGTGAAGCAAGAAATCAATCTAACAATGGCGAGGTGCCACAAGGGGAGGGAAAAGAACGACTCTTAGAGCAGATCATG
CGAAATGTGGAAACCATGGTCAATGAGAGGTTGGATAGAATAAAACAAAGGCTTCAAGCAAGATTAAATTCACCAACTGCTTGTGAAATAATCACGAACTACTGCGAACA
CCACCACTATGGTTACACCGGTATGACTCTGAGACTTCTAGAGGTAGGAGACTGGTGGGAGTCTAGAGGGAGCCTTCAGGGGAATTCTCTGAGAACCTACAACTGCACTC
TTCTCACTGCAAATATTTCTGTGTCCACGGATATCGGCCAATGCAGAGTTCCTCTCGGGCTAGGAGAGGACGGCGCGCCTTTGTTCAAGCCCCGGAGTCAGCTCTTAAGG
GAACACACATCTACTTACCCTAATAGGGGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCCCACTTTCGGTCTTGCCCCTGAAATGAAATCTAAACTAGTTAA
CATCGTTACATCTAGTGGTTACTATTTCGCGGTTCGGTCTTATACAAACTCATTACATAGGATACCCCACCCGCATGTCTCCTACATGGATGCTTGGATCATTGCATCTG
TATCGAATATAAGGTGGGTCATATCACATAGTGTTACCAGGATAAGAAGGCCACCTGGTAGAAGAGGAAACTACAACAGGGATCGAGGCTTTGGCAACATTAAAGTTAAA
TTTTCAAAGTTTCATGGTACATCTGACCCTGAAGACTACTTCCAATGGGAACATGAAGTTGGACACATTTTTCATACCAATAGTTTCTCAGAAGAGAAGAAGCGCATGCA
CACTTTCCAAGATGATCAAGAGACAGAAAAAGGCTTAGCGCAAGCGCCTCATGCGGCGATAAGTACAACCTTGCTCCCTGTTGAGTCTTTTTCTCCAGGAACAAGAAATT
GTATGCGTGCCGCCCGACGAATTGAATTCGAGGTAGATCCTGTAATCGATAGAACATACCATAGAAGAAGAAGAAATCGAAGACCTCGAAGGCAACCAGGAGAAATGGCA
GCACCAAACCAACCAAATAGACCATTAAACCCCATCCAGATGGCCGATGATAGGGCCAGAGGAATTAGAGATTATGCAGCCCCTGCAAATTGCAATTTCAATCCAGGGAT
AGTTAAGCCAATTCTAAAACAGAAAGGACAATTTGGAGGAAGTGCATCGGAAGATCCTCACTCTCACCTCAAGTCATTCCTCGACATTTGCAACAAGTTTATAATTCCAA
GAGTTACCCCAGAACAACTTCAAGTCATATTATTTCCTTACTCTCTGCGAGATGCGGCGAAAGTGTGGTTAAACCAGCAACCAGCAAACTCCATCGCAACATGGAATGTT
TTGGAGAAAAGTTCATAG
Protein sequenceShow/hide protein sequence
MGSSEFCIAKLCPQLSIHANQRTILNKQEFIVSSGLRTPSLTCLIHERLGSHCSSLENIASRPNSVPRIKVLNKEPRPPIGPRGTWFGGWTINQLFIRGLMGLNDQEDQS
PVQGPNNYNWLLISTYKQWSLITLFEILETRVASLDIQVGDGRKEFGIEIEEIASGELIQEIEFLNLCRGFMKSGSMIFVWKQASEARNQSNNGEVPQGEGKERLLEQIM
RNVETMVNERLDRIKQRLQARLNSPTACEIITNYCEHHHYGYTGMTLRLLEVGDWWESRGSLQGNSLRTYNCTLLTANISVSTDIGQCRVPLGLGEDGAPLFKPRSQLLR
EHTSTYPNRGRSEFHLVLLCSQPTFGLAPEMKSKLVNIVTSSGYYFAVRSYTNSLHRIPHPHVSYMDAWIIASVSNIRWVISHSVTRIRRPPGRRGNYNRDRGFGNIKVK
FSKFHGTSDPEDYFQWEHEVGHIFHTNSFSEEKKRMHTFQDDQETEKGLAQAPHAAISTTLLPVESFSPGTRNCMRAARRIEFEVDPVIDRTYHRRRRNRRPRRQPGEMA
APNQPNRPLNPIQMADDRARGIRDYAAPANCNFNPGIVKPILKQKGQFGGSASEDPHSHLKSFLDICNKFIIPRVTPEQLQVILFPYSLRDAAKVWLNQQPANSIATWNV
LEKSS