; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000431 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000431
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 2-like
Genome locationchr4:7252284..7253061
RNA-Seq ExpressionLag0000431
SyntenyLag0000431
Gene Ontology termsGO:0009791 - post-embryonic development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050616.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]2.5e-2573.49Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        N  +Y +LSKIA+D+ AVPVSTVASES FSTGGRILDSFRSSL+P TVE LICTQNWIRG++ LLDL P+LEE+E C  IE G
Subjt:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

KAA0053413.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.9e-2581.25Show/hide
Query:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        +Y +LS I RDVLAVP+STVASES FSTGGRILDSFRSSLTP TVE LICTQNWIRG SVLLDL PQLEELET   IE G
Subjt:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

KAA0056011.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.9e-2581.25Show/hide
Query:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        +Y +LS I RDVLAVP+STVASES FSTGGRILDSFRSSLTP TVE LICTQNWIRG SVLLDL PQLEELET   IE G
Subjt:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

TYK05741.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]2.5e-2573.49Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        N  +Y +LSKIA+D+ AVPVSTVASES FSTGGRILDSFRSSL+P TVE LICTQNWIRG++ LLDL P+LEE+E C  IE G
Subjt:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

TYK26463.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]1.9e-2581.25Show/hide
Query:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        +Y +LS I RDVLAVP+STVASES FSTGGRILDSFRSSLTP TVE LICTQNWIRG SVLLDL PQLEELET   IE G
Subjt:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

TrEMBL top hitse value%identityAlignment
A0A5A7U8W5 Zinc finger BED domain-containing protein RICESLEEPER 2-like1.2e-2573.49Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        N  +Y +LSKIA+D+ AVPVSTVASES FSTGGRILDSFRSSL+P TVE LICTQNWIRG++ LLDL P+LEE+E C  IE G
Subjt:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

A0A5A7UBZ7 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.4e-2681.25Show/hide
Query:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        +Y +LS I RDVLAVP+STVASES FSTGGRILDSFRSSLTP TVE LICTQNWIRG SVLLDL PQLEELET   IE G
Subjt:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

A0A5A7UR09 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.4e-2681.25Show/hide
Query:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        +Y +LS I RDVLAVP+STVASES FSTGGRILDSFRSSLTP TVE LICTQNWIRG SVLLDL PQLEELET   IE G
Subjt:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

A0A5D3C1C9 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.2e-2573.49Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        N  +Y +LSKIA+D+ AVPVSTVASES FSTGGRILDSFRSSL+P TVE LICTQNWIRG++ LLDL P+LEE+E C  IE G
Subjt:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

A0A5D3DSA5 Zinc finger BED domain-containing protein RICESLEEPER 2-like9.4e-2681.25Show/hide
Query:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
        +Y +LS I RDVLAVP+STVASES FSTGGRILDSFRSSLTP TVE LICTQNWIRG SVLLDL PQLEELET   IE G
Subjt:  RYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG

SwissProt top hitse value%identityAlignment
B9FJG3 Zinc finger BED domain-containing protein RICESLEEPER 13.8e-0850Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVAS-ESTFS--TGGRILDSFRSSLTPTTVEDLICTQNWIR
        N  +Y  LSK+ARD+LA+P+S V+S  S FS  TG R+LD +RSS  P  VE L+C ++W++
Subjt:  NLARYQVLSKIARDVLAVPVSTVAS-ESTFS--TGGRILDSFRSSLTPTTVEDLICTQNWIR

P03010 Putative AC9 transposase1.6e-1157.89Show/hide
Query:  LARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWI
        +A Y +L++IARDVLA+ VSTVASES FS GGR++D +R+ L    VE LICT++W+
Subjt:  LARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWI

P08770 Putative AC transposase1.6e-1157.89Show/hide
Query:  LARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWI
        +A Y +L++IARDVLA+ VSTVASES FS GGR++D +R+ L    VE LICT++W+
Subjt:  LARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWI

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 25.0e-0848.39Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVAS-ESTFS--TGGRILDSFRSSLTPTTVEDLICTQNWIR
        N  ++  LS++ARD+LA+P+S V+S  S FS  TG R+LD +RSSL P  VE L+C ++W++
Subjt:  NLARYQVLSKIARDVLAVPVSTVAS-ESTFS--TGGRILDSFRSSLTPTTVEDLICTQNWIR

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 33.4e-0941.18Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVASESTF----STGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIE
        N  ++  LSK+ARDVLA+P+S V+S S+     +TG ++LD +RSSL P TVE L C ++W       L  PP   E  + A ++
Subjt:  NLARYQVLSKIARDVLAVPVSTVASESTF----STGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIE

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain7.9e-0944.83Show/hide
Query:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWI
        N  +Y  LSK+ARD+L++PVS  A +  F    R +D +++SL P TVE LIC + W+
Subjt:  NLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATGTGGAAGTAATTTCATCAGAATGTAGTTTTACTTCTTTGAGTGTGGAATCTGGTGCAAGTCCAAGTGCATCAAATTTGGCTCGATATCAAGTTTTATCAAA
AATCGCTCGAGATGTTTTGGCAGTTCCAGTGTCTACTGTGGCTTCTGAATCGACATTTAGTACTGGAGGGAGGATTCTTGATTCTTTTAGAAGTTCTTTGACACCTACAA
CAGTGGAGGATTTGATATGTACACAAAATTGGATTCGTGGTCAATCGGTATTATTAGATCTTCCTCCACAACTTGAAGAATTGGAGACTTGTGCTACAATTGAGAAAGGT
ACTGCAGGGATCTATGCTAATGTTCGTGATACCAATTATCGTGGAGTTTTATGCTTTGGCTTGTTAGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATGTGGAAGTAATTTCATCAGAATGTAGTTTTACTTCTTTGAGTGTGGAATCTGGTGCAAGTCCAAGTGCATCAAATTTGGCTCGATATCAAGTTTTATCAAA
AATCGCTCGAGATGTTTTGGCAGTTCCAGTGTCTACTGTGGCTTCTGAATCGACATTTAGTACTGGAGGGAGGATTCTTGATTCTTTTAGAAGTTCTTTGACACCTACAA
CAGTGGAGGATTTGATATGTACACAAAATTGGATTCGTGGTCAATCGGTATTATTAGATCTTCCTCCACAACTTGAAGAATTGGAGACTTGTGCTACAATTGAGAAAGGT
ACTGCAGGGATCTATGCTAATGTTCGTGATACCAATTATCGTGGAGTTTTATGCTTTGGCTTGTTAGGCTAG
Protein sequenceShow/hide protein sequence
MENVEVISSECSFTSLSVESGASPSASNLARYQVLSKIARDVLAVPVSTVASESTFSTGGRILDSFRSSLTPTTVEDLICTQNWIRGQSVLLDLPPQLEELETCATIEKG
TAGIYANVRDTNYRGVLCFGLLG