| GenBank top hits | e value | %identity | Alignment |
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| KAF7129225.1 hypothetical protein RHSIM_Rhsim10G0050800 [Rhododendron simsii] | 3.8e-40 | 38.38 | Show/hide |
Query: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMTKGKDKV---------DEDNEPSSSRKKWKGRNEVECYYCHKKG
LL+SLPDSWET+ +SNS + + V D EE RR+ + +V +G+ ++ +D S SR K R+E+EC++CHK G
Subjt: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMTKGKDKV---------DEDNEPSSSRKKWKGRNEVECYYCHKKG
Query: HFKYQCRKFKEDQKRKPEANIV-----------EEVVLACVESDTKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSL
H + +CR +++ K+ A I EV++ C + + W++DS AS H+ S R F S+T G VRMGN SK G+GDV L
Subjt: HFKYQCRKFKEDQKRKPEANIV-----------EEVVLACVESDTKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSL
Query: KTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAKG
+T G KL+L+DVR+VPNI++NLIS GKL ++GY +FG + KL GS VVA G + STLY ++KG
Subjt: KTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAKG
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| RVW14266.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.8e-40 | 38.68 | Show/hide |
Query: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
V LAA + D E + LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ + K K + + S R
Subjt: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
Query: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
+ +VECYYCHKKGH K +CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VR
Subjt: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
Query: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
MGN SK G+GD+ L+T G KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY + K
Subjt: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
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| RVW42505.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 2.9e-40 | 39.62 | Show/hide |
Query: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKY
LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ + K K + + S R + +VECYYCHKKGH K
Subjt: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKY
Query: QCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECG
+CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VRMGN SK G+GD+ L+T G
Subjt: QCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECG
Query: GKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY + K
Subjt: GKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
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| RVW84195.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 3.8e-40 | 38.68 | Show/hide |
Query: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
V LAA + D E + LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ + K K + + S R
Subjt: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
Query: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
+ +VECYYCHKKGH K +CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VR
Subjt: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
Query: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
MGN SK G+GD+ L+T G KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY + K
Subjt: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
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| RVW94144.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.0e-40 | 38.78 | Show/hide |
Query: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
V LAA + D E + LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ K K K + + S R
Subjt: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
Query: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
+ +VECYYCHKKGH K +CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VR
Subjt: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
Query: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLY-------RCLLNVAK
MGN SK G+GD+ L+T G KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY +C++N K
Subjt: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLY-------RCLLNVAK
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A438BTH6 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-40 | 38.68 | Show/hide |
Query: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
V LAA + D E + LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ + K K + + S R
Subjt: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
Query: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
+ +VECYYCHKKGH K +CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VR
Subjt: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
Query: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
MGN SK G+GD+ L+T G KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY + K
Subjt: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
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| A0A438E432 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.4e-40 | 39.62 | Show/hide |
Query: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKY
LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ + K K + + S R + +VECYYCHKKGH K
Subjt: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKY
Query: QCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECG
+CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VRMGN SK G+GD+ L+T G
Subjt: QCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECG
Query: GKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY + K
Subjt: GKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
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| A0A438HI91 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.9e-40 | 38.68 | Show/hide |
Query: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
V LAA + D E + LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ + K K + + S R
Subjt: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
Query: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
+ +VECYYCHKKGH K +CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VR
Subjt: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
Query: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
MGN SK G+GD+ L+T G KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY + K
Subjt: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAK
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| A0A438IBT7 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.9e-41 | 38.78 | Show/hide |
Query: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
V LAA + D E + LL+SLP+SWET+ VSNST + + S+V + EE RR+ S S+ ALV+ K K K + + S R
Subjt: VTDLAATDLDGDSETERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRRQGSNKESAVGSALVMT-----KGKDKVDEDNEPSSSR
Query: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
+ +VECYYCHKKGH K +CRK K +K++ + +V + L + D + +DW++DS AS H+ S FTS++ G VR
Subjt: KKWKGRNEVECYYCHKKGHFKYQCRKF--------KEDQKRKPEANIVEEVVLACVESDTKYS--NHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVR
Query: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLY-------RCLLNVAK
MGN SK G+GD+ L+T G KL+LRDVR+VP+I++NLIS GKL ++GY F + KL GS VVA G + +LY +C++N K
Subjt: MGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLY-------RCLLNVAK
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| A0A4D8YHC2 CCHC-type domain-containing protein | 1.1e-37 | 38.78 | Show/hide |
Query: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRR--QGSNKESAVGSALVMTKGKDK-VDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKYQC
LL+SLPDSW+T+ ++SNS L V D + EE RR Q + E+ A +G++K + N SR K K + + +C+YC H++ C
Subjt: LLTSLPDSWETMKTAVSNSTGNNTLKFSEVCDLAIAEEIRR--QGSNKESAVGSALVMTKGKDK-VDEDNEPSSSRKKWKGRNEVECYYCHKKGHFKYQC
Query: RKFKEDQKRKPEANIVE---------EVVLACVESDTKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECGGKL
RK K DQ R N + +VV+ C ++ S +DWI+DS AS HI R +F S+TG G VRM N ++ GIGD+ L T+ G KL
Subjt: RKFKEDQKRKPEANIVE---------EVVLACVESDTKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECGGKL
Query: VLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAKG
VLRDVR+VP+I++N+IS GKL +DGY+ FG + KL GS + A G ++++LY ++ G
Subjt: VLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAKG
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.0e-27 | 34.3 | Show/hide |
Query: ERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESAVGSALVMT-KGKDKVDEDNEPSSSRKKWKGRNEVE-----CYY
E + LL SLP S++ + T + + G T++ +V L + E++R++ N+ G AL+ +G+ N S + K +N + CY
Subjt: ERRRTETLLTSLPDSWETMKTAVSNSTGNNTLKFSEVCD-LAIAEEIRRQGSNKESAVGSALVMT-KGKDKVDEDNEPSSSRKKWKGRNEVE-----CYY
Query: CHKKGHFKYQC---RKFK-EDQKRKPEANIV------EEVVLACVESD--TKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRG
C++ GHFK C RK K E +K + N + VVL E + S S+W++D+AAS H R LF + G V+MGN SK G
Subjt: CHKKGHFKYQC---RKFK-EDQKRKPEANIV------EEVVLACVESD--TKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRG
Query: IGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAKG
IGD+ +KT G LVL+DVR+VP+++MNLIS L DGY F +++ +L GS V+A G + TLYR + +G
Subjt: IGDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLANDGYMCEFGSRQCKLKFGSQVVAVGHRKSTLYRCLLNVAKG
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| P25601 Putative transposon Ty5-1 protein YCL075W | 1.3e-06 | 36.78 | Show/hide |
Query: CVESDTKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI
C+ S T + S+WI D+ + H+ DRS+F+SFT R G G + G G V++ G + L DV YVP++ +NLIS+
Subjt: CVESDTKYSNHLSDWILDSAASVHIASDRSLFTSFTGRHRGLVRMGNGRTSKTRGIGDVSLKTECGGKLVLRDVRYVPNIKMNLISI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 7.1e-05 | 31.25 | Show/hide |
Query: ECYYCHKKGHFKYQCRKFK----EDQKRKPEANIVEEVVLACVESDTKYSNHLSDWILDSAASVHIASD---RSLFTSFTGRHRGLVRMGNGRTSKTRGI
+C C +GH +C + + ++P + A + + YS+ ++W+LDS A+ HI SD SL +TG V + +G T
Subjt: ECYYCHKKGHFKYQCRKFK----EDQKRKPEANIVEEVVLACVESDTKYSNHLSDWILDSAASVHIASD---RSLFTSFTGRHRGLVRMGNGRTSKTRGI
Query: GDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLAN-DGYMCEF
G SL T+ L L ++ YVPNI NLIS+ +L N +G EF
Subjt: GDVSLKTECGGKLVLRDVRYVPNIKMNLISIGKLAN-DGYMCEF
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