| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-83 | 83.85 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| KAA0033121.1 gag/pol protein [Cucumis melo var. makuwa] | 1.4e-81 | 81.77 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIW+MDV TAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GF+QNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KV FL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa] | 2.1e-82 | 82.81 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIA +YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa] | 1.5e-83 | 83.85 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| TYK15984.1 gag/pol protein [Cucumis melo var. makuwa] | 2.3e-84 | 84.38 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + L +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T2V9 Gag/pol protein | 1.0e-82 | 82.81 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIA +YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| A0A5A7TZD0 Gag/pol protein | 7.2e-84 | 83.85 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| A0A5A7UYE8 Gag/pol protein | 7.2e-84 | 83.85 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| A0A5D3CYF4 Gag/pol protein | 1.1e-84 | 84.38 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIWQMDVKTAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GFDQNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KVAFL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + L +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| A0A5D3CZY3 Gag/pol protein | 6.7e-82 | 81.77 | Show/hide |
Query: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
MLKSIRILLSIAT+YDYEIW+MDV TAFLNGNLEE+IFMSQPEGFI QGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS+GF+QNVDEPCVYKK+NK
Subjt: MLKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
KV FL+LYVDDILLIGNDVGYLTD+K WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT + +N K L P H+S
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQAT---SFVFPSLFENKPKPLAPLPPSQHIS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.9e-26 | 38.41 | Show/hide |
Query: LKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVY--KKVNK
+ S R +LS+ Y+ ++ QMDVKTAFLNG L+E I+M P+G VCKLN++IYGLKQA+R W F+ A+K F + + C+Y K N
Subjt: LKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVY--KKVNK
Query: RKVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA
+ +++LYVDD+++ D+ + + K++L +F+M DL E ++ +GI+I + + + LSQ+
Subjt: RKVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 4.7e-40 | 49.38 | Show/hide |
Query: LKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVY-KKVNKR
+ SIR +LS+A D E+ Q+DVKTAFL+G+LEE I+M QPEGF G++ VCKLN+S+YGLKQA R W ++FD+ +KS + + +PCVY K+ ++
Subjt: LKSIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVY-KKVNKR
Query: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQ
L+LYVDD+L++G D G + +K L+ F MKDLG AQ +LG++I+R+R ++ L LSQ
Subjt: KVAFLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQ
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| P25600 Putative transposon Ty5-1 protein YCL074W | 8.0e-16 | 34.38 | Show/hide |
Query: MDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKRKVAFLILYVDDILLIGNDVGY
MDV TAFLN ++E I++ QP GF+ + V +L +YGLKQA WN + +K GF ++ E +Y + ++ +YVDD+L+
Subjt: MDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKRKVAFLILYVDDILLIGNDVGY
Query: LTDIKKWLAAQFQMKDLGEAQYVLGIQI
+K+ L + MKDLG+ LG+ I
Subjt: LTDIKKWLAAQFQMKDLGEAQYVLGIQI
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 5.6e-25 | 38.51 | Show/hide |
Query: SIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKRKVA
SIRI+L +A + I Q+DV AFL G L ++++MSQP GFI + + VCKL +++YGLKQA R+W + + + GF +V + ++ + +
Subjt: SIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKRKVA
Query: FLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIR
++++YVDDIL+ GND L + L+ +F +KD E Y LGI+ R
Subjt: FLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIR
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.6e-24 | 37.16 | Show/hide |
Query: SIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKRKVA
SIRI+L +A + I Q+DV AFL G L + ++MSQP GF+ + + VC+L ++IYGLKQA R+W + T + + GF ++ + ++ R +
Subjt: SIRILLSIATYYDYEIWQMDVKTAFLNGNLEENIFMSQPEGFIAQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSFGFDQNVDEPCVYKKVNKRKVA
Query: FLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIR
++++YVDDIL+ GND L L+ +F +K+ + Y LGI+ R
Subjt: FLILYVDDILLIGNDVGYLTDIKKWLAAQFQMKDLGEAQYVLGIQIIR
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