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Lag0000448 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000448
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr4:7529576..7529938
RNA-Seq ExpressionLag0000448
SyntenyLag0000448
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]8.4e-1258.93Show/hide
Query:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK
        +YNAILGRPT+H L+A+ STYHQ +KFPT  GVG + GEQ++SRECY+ ++++ D+
Subjt:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]2.4e-1160.71Show/hide
Query:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK
        +YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + GEQ++SRECY  ++++ D+
Subjt:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK

XP_022155902.1 uncharacterized protein LOC111022905 [Momordica charantia]2.4e-1158.62Show/hide
Query:  RPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK
        + +YNAILGR T+H LKA+ STYHQ +KFPT  GVG + GEQ++SRECY+ ++K  D+
Subjt:  RPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK

XP_022157402.1 uncharacterized protein LOC111024109 [Momordica charantia]1.4e-1160.66Show/hide
Query:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDKKAQAT
        AYNAI+GRP +H L+AV STYHQVLK+PT  G+  V GEQK SRECY  A+K     A  T
Subjt:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDKKAQAT

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]3.2e-1158.93Show/hide
Query:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK
        +YNAILGR T+H LKA+ STYHQ +KFPT  GVG + GEQ++SRECY+ +++  D+
Subjt:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141474.1e-1258.93Show/hide
Query:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK
        +YNAILGRPT+H L+A+ STYHQ +KFPT  GVG + GEQ++SRECY+ ++++ D+
Subjt:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK

A0A6J1DAK4 uncharacterized protein LOC1110189021.5e-1158.62Show/hide
Query:  NAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDKKAQA
        NAILGRPT+H LKA+ S YHQ +KFPT  G+G + GEQ++SRECY+ ++K  DK + A
Subjt:  NAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDKKAQA

A0A6J1DQL9 uncharacterized protein LOC1110229051.2e-1158.62Show/hide
Query:  RPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK
        + +YNAILGR T+H LKA+ STYHQ +KFPT  GVG + GEQ++SRECY+ ++K  D+
Subjt:  RPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK

A0A6J1DQY2 uncharacterized protein LOC1110223211.2e-1160.71Show/hide
Query:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK
        +YNAILGRPT+H LKA+ STYHQ  KFPT  GVG + GEQ++SRECY  ++++ D+
Subjt:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDK

A0A6J1DUD8 uncharacterized protein LOC1110241096.9e-1260.66Show/hide
Query:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDKKAQAT
        AYNAI+GRP +H L+AV STYHQVLK+PT  G+  V GEQK SRECY  A+K     A  T
Subjt:  AYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDKKAQAT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCTGGGGAGTGATCAGCCCACTGGTGGGGTTTGGCGAAGAGAAGGTGAGCCCAAGAGGAAGCATCGAGCTGCCAGTAACATTCAGGGAAGGACTGCAGACAGTGA
CAAGGATGATCAATTTCCTGGTAGTAGACTGCGTCCAGCATATAATGCCATCTTGGGAAGACCCACCCTACATGGGCTTAAAGCTGTAGCCTCGACTTACCACCAAGTCC
TGAAATTCCCAACCGAAGAAGGTGTAGGAGCAGTGTATGGTGAGCAAAAGATGTCGAGGGAATGCTACTTTATGGCGCTCAAGAACGTCGACAAAAAGGCTCAAGCAACG
CTGCCTCGGAGAAGGTCGAAGCCGAGCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCTGGGGAGTGATCAGCCCACTGGTGGGGTTTGGCGAAGAGAAGGTGAGCCCAAGAGGAAGCATCGAGCTGCCAGTAACATTCAGGGAAGGACTGCAGACAGTGA
CAAGGATGATCAATTTCCTGGTAGTAGACTGCGTCCAGCATATAATGCCATCTTGGGAAGACCCACCCTACATGGGCTTAAAGCTGTAGCCTCGACTTACCACCAAGTCC
TGAAATTCCCAACCGAAGAAGGTGTAGGAGCAGTGTATGGTGAGCAAAAGATGTCGAGGGAATGCTACTTTATGGCGCTCAAGAACGTCGACAAAAAGGCTCAAGCAACG
CTGCCTCGGAGAAGGTCGAAGCCGAGCATTTGA
Protein sequenceShow/hide protein sequence
MRLGSDQPTGGVWRREGEPKRKHRAASNIQGRTADSDKDDQFPGSRLRPAYNAILGRPTLHGLKAVASTYHQVLKFPTEEGVGAVYGEQKMSRECYFMALKNVDKKAQAT
LPRRRSKPSI