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Lag0000469 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000469
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCR4-NOT transcription complex subunit 11
Genome locationchr4:8017310..8019985
RNA-Seq ExpressionLag0000469
SyntenyLag0000469
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0017148 - negative regulation of translation (biological process)
GO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
InterPro domainsIPR019312 - CCR4-NOT transcription complex subunit 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649439.1 CCR4-NOT transcription complex subunit 11 [Cucumis sativus]2.1e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

XP_016902636.1 PREDICTED: CCR4-NOT transcription complex subunit 11 isoform X2 [Cucumis melo]2.1e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

XP_022931999.1 CCR4-NOT transcription complex subunit 11 [Cucurbita moschata]2.1e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

XP_022973810.1 CCR4-NOT transcription complex subunit 11 [Cucurbita maxima]2.1e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

XP_038901187.1 CCR4-NOT transcription complex subunit 11 isoform X3 [Benincasa hispida]2.1e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

TrEMBL top hitse value%identityAlignment
A0A0A0LK95 CCR4-NOT transcription complex subunit 111.0e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

A0A1S3CDE6 CCR4-NOT transcription complex subunit 111.0e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

A0A1S4E330 CCR4-NOT transcription complex subunit 111.0e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

A0A6J1EVU1 CCR4-NOT transcription complex subunit 111.0e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

A0A6J1ICB1 CCR4-NOT transcription complex subunit 111.0e-4676.39Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        QVVVELANDPKLVYH GLT +KL   VE+NP IAVEVLKKLINSPEIAEYFTVLVNMDMS++SMEVVNRL T  ELPSEFIHMYITN IS CEGI DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

SwissProt top hitse value%identityAlignment
A4QP78 CCR4-NOT transcription complex subunit 111.1e-3761.11Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        Q++ EL  D KLVYH GLT  KL   VE+NP +A+E+L KL++S +I EYF+VLVNMDMS++SMEVVNRL T  +LP EFIH+YI+N IS CE I DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              ++DLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

B0BNA9 CCR4-NOT transcription complex subunit 119.8e-3961.81Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        Q++ EL  DPKLVYH GLT  KL   VE+NP +A+E+L KL+ S +I EYF+VLVNMDMS++SMEVVNRL T  +LP EFIH+YI+N IS CE I DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              ++DLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

Q1ZXI2 CCR4-NOT transcription complex subunit 111.4e-2447.3Show/hide
Query:  KESRYQVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI
        K    Q+  E+  DPKL Y+ GLT + L   VE+N  +A++ L KLINSP+  ++F  L++M+M+  SMEVVN L  T +LP  FI MYITN I  C  I
Subjt:  KESRYQVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI

Query:  TDKYMQNILVRLVA-------------IKDLFIEVQAFCIELSCIREA
         DK MQ   VRLV              IK+LF EVQ FC+E S IREA
Subjt:  TDKYMQNILVRLVA-------------IKDLFIEVQAFCIELSCIREA

Q9CWN7 CCR4-NOT transcription complex subunit 119.8e-3961.81Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        Q++ EL  DPKLVYH GLT  KL   VE+NP +A+E+L KL+ S +I EYF+VLVNMDMS++SMEVVNRL T  +LP EFIH+YI+N IS CE I DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              ++DLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

Q9UKZ1 CCR4-NOT transcription complex subunit 119.8e-3961.81Show/hide
Query:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM
        Q++ EL  DPKLVYH GLT  KL   VE+NP +A+E+L KL+ S +I EYF+VLVNMDMS++SMEVVNRL T  +LP EFIH+YI+N IS CE I DKYM
Subjt:  QVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGITDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              ++DLFIEVQAFCIE S IREAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

Arabidopsis top hitse value%identityAlignment
AT5G18420.1 unknown protein1.9e-3761.11Show/hide
Query:  VVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI-TDKYM
        ++ ELANDPKLV+H G+T +KL   VE NP IAVE+L KL NS EI +Y+  L NMDMS++SMEVVNRL T  ELP +FI MYITN IS CE    DKYM
Subjt:  VVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI-TDKYM

Query:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        QN LVRLV              +KDLFIEVQAFCIE S +REAA
Subjt:  QNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

AT5G18420.2 unknown protein2.5e-3760.69Show/hide
Query:  VVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI--TDKY
        ++ ELANDPKLV+H G+T +KL   VE NP IAVE+L KL NS EI +Y+  L NMDMS++SMEVVNRL T  ELP +FI MYITN IS CE     DKY
Subjt:  VVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI--TDKY

Query:  MQNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        MQN LVRLV              +KDLFIEVQAFCIE S +REAA
Subjt:  MQNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA

AT5G18420.3 unknown protein2.5e-3760.69Show/hide
Query:  VVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI--TDKY
        ++ ELANDPKLV+H G+T +KL   VE NP IAVE+L KL NS EI +Y+  L NMDMS++SMEVVNRL T  ELP +FI MYITN IS CE     DKY
Subjt:  VVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYISLCEGI--TDKY

Query:  MQNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA
        MQN LVRLV              +KDLFIEVQAFCIE S +REAA
Subjt:  MQNILVRLVA-------------IKDLFIEVQAFCIELSCIREAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCATTCTTCAAATAACCTCAAATTGGAACATTTGTGGCCTAAGGAGTCTAGATATCAAGTGGTGGTGGAGTTAGCAAATGACCCAAAACTTGTATATCATCGTGG
ATTAACACTCCAAAAGCTAATTGGACGGGTGGAAAGCAATCCTTTTATTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCAGAGTACTTTACTGTTC
TTGTTAACATGGACATGAGTATAAACTCTATGGAAGTTGTCAACAGGCTAAGGACAACTTTTGAACTTCCCTCTGAGTTCATACACATGTACATCACTAATTATATATCA
TTGTGTGAGGGCATTACAGATAAGTACATGCAGAACATATTAGTTCGACTTGTTGCAATCAAAGATCTTTTCATTGAAGTTCAAGCTTTCTGCATAGAACTCTCTTGTAT
CAGAGAAGCGGCAACCCCACTTCCCATTTACATTTTATTTGGATTATTTTGTTGTCTTGCTTGCTTGCTGGCTATTGCTTTGGAAACCGTCAACATGGTTGTTTCAGAGA
GGAAAGACAAACTGGGTGAATGTATTGTGGCCTTGCAACAACTTGTTTCACCATATGGAAAGCCACTTATCGTAGTTCCAAGCGAATTCGAGCACTTCTACTTGCCAACC
GGCTGGCTTTCGGGCTCAAAATGGGCTTTCGATGACTACCCACAATCTGAACAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCATTCTTCAAATAACCTCAAATTGGAACATTTGTGGCCTAAGGAGTCTAGATATCAAGTGGTGGTGGAGTTAGCAAATGACCCAAAACTTGTATATCATCGTGG
ATTAACACTCCAAAAGCTAATTGGACGGGTGGAAAGCAATCCTTTTATTGCAGTTGAAGTTCTAAAGAAATTGATTAATTCCCCTGAAATTGCAGAGTACTTTACTGTTC
TTGTTAACATGGACATGAGTATAAACTCTATGGAAGTTGTCAACAGGCTAAGGACAACTTTTGAACTTCCCTCTGAGTTCATACACATGTACATCACTAATTATATATCA
TTGTGTGAGGGCATTACAGATAAGTACATGCAGAACATATTAGTTCGACTTGTTGCAATCAAAGATCTTTTCATTGAAGTTCAAGCTTTCTGCATAGAACTCTCTTGTAT
CAGAGAAGCGGCAACCCCACTTCCCATTTACATTTTATTTGGATTATTTTGTTGTCTTGCTTGCTTGCTGGCTATTGCTTTGGAAACCGTCAACATGGTTGTTTCAGAGA
GGAAAGACAAACTGGGTGAATGTATTGTGGCCTTGCAACAACTTGTTTCACCATATGGAAAGCCACTTATCGTAGTTCCAAGCGAATTCGAGCACTTCTACTTGCCAACC
GGCTGGCTTTCGGGCTCAAAATGGGCTTTCGATGACTACCCACAATCTGAACAGCCTTGA
Protein sequenceShow/hide protein sequence
MTHSSNNLKLEHLWPKESRYQVVVELANDPKLVYHRGLTLQKLIGRVESNPFIAVEVLKKLINSPEIAEYFTVLVNMDMSINSMEVVNRLRTTFELPSEFIHMYITNYIS
LCEGITDKYMQNILVRLVAIKDLFIEVQAFCIELSCIREAATPLPIYILFGLFCCLACLLAIALETVNMVVSERKDKLGECIVALQQLVSPYGKPLIVVPSEFEHFYLPT
GWLSGSKWAFDDYPQSEQP