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Lag0000471 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000471
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr4:8043850..8044221
RNA-Seq ExpressionLag0000471
SyntenyLag0000471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607014.1 Protein PTST, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.5e-0538.6Show/hide
Query:  AVMATAMAVLILMLSGSNCKVASLSPYNVGNQTVAAAASMWCDGGTEECLAGEDDGE------LAFPSLQGSAGRRPTDGTRSRGKPACDRPNGERYYDC
        A+MA   A+++L L+ SN   ASLS  N GN+T A A S WCD  TEECL G+DD +      LAF  +   +GR   +  R    PA    N +R  + 
Subjt:  AVMATAMAVLILMLSGSNCKVASLSPYNVGNQTVAAAASMWCDGGTEECLAGEDDGE------LAFPSLQGSAGRRPTDGTRSRGKPACDRPNGERYYDC

Query:  TGKPRTIPKPQPCV
        T     I  P+ C+
Subjt:  TGKPRTIPKPQPCV

KAG6607070.1 hypothetical protein SDJN03_00412, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2354.33Show/hide
Query:  MGHPSRTGAVM----ATAMAVLILMLSGSNCKVASLSPYNVGNQTVAAAASMWCDGGTEECLAGEDDGELAFPSLQGSAGRRPTDGTRSRGKPACDRPNG
        MGH S +GAVM    A AM V ILMLSGS+C VAS +P + GN TVAAAASMWCDG  EEC+  EDDGE AFPSL  S  +  +  TR+R KP C+RP  
Subjt:  MGHPSRTGAVM----ATAMAVLILMLSGSNCKVASLSPYNVGNQTVAAAASMWCDGGTEECLAGEDDGELAFPSLQGSAGRRPTDGTRSRGKPACDRPNG

Query:  ERYYDCTGKPRTIPKPQPCVVYTRGCK
          Y  C    RT  K   C  Y R C+
Subjt:  ERYYDCTGKPRTIPKPQPCVVYTRGCK

KAG6607071.1 hypothetical protein SDJN03_00413, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2050.41Show/hide
Query:  MGHPSRTGAVM-ATAMAVLILMLSGSNCKVASLSPYNVGNQTVAAAASMWCDGGTEECLAGEDDGELAFPSLQGSAGRRPTDGTRSRGKPACDRPNGERY
        MGH S +G VM A AM V IL+LSGS+C VAS +P + GN TVAAAASMWCDG  EEC+  E D   AFPSLQ S  +  +  + +  K  C+RP  + Y
Subjt:  MGHPSRTGAVM-ATAMAVLILMLSGSNCKVASLSPYNVGNQTVAAAASMWCDGGTEECLAGEDDGELAFPSLQGSAGRRPTDGTRSRGKPACDRPNGERY

Query:  YDCTGKPRTIPKPQPCVVYTRGC
          C    R+ P P  C  YTR C
Subjt:  YDCTGKPRTIPKPQPCVVYTRGC

KGN57814.1 hypothetical protein Csa_009509 [Cucumis sativus]2.3e-0436.36Show/hide
Query:  TGAVMATAMAVLILMLSGSNCKVASLSPYNVGNQ-TVAAAASMWCDGGTEECLAGEDDGEL---AFPSLQGSAGRRPTDGTRSRGKPACDRPNGERYYDC
        T  ++A A+ V++  +  S+CK ASL+  N+GN+ T AA +S WC+   +ECL G +D  +   AFPSL        T  T +  K  C R    RY + 
Subjt:  TGAVMATAMAVLILMLSGSNCKVASLSPYNVGNQ-TVAAAASMWCDGGTEECLAGEDDGEL---AFPSLQGSAGRRPTDGTRSRGKPACDRPNGERYYDC

Query:  TGKPRTIPKP-QPCVVYTRGC
           P+  P P Q C  +TR C
Subjt:  TGKPRTIPKP-QPCVVYTRGC

TrEMBL top hitse value%identityAlignment
A0A0A0LA12 Uncharacterized protein1.1e-0436.36Show/hide
Query:  TGAVMATAMAVLILMLSGSNCKVASLSPYNVGNQ-TVAAAASMWCDGGTEECLAGEDDGEL---AFPSLQGSAGRRPTDGTRSRGKPACDRPNGERYYDC
        T  ++A A+ V++  +  S+CK ASL+  N+GN+ T AA +S WC+   +ECL G +D  +   AFPSL        T  T +  K  C R    RY + 
Subjt:  TGAVMATAMAVLILMLSGSNCKVASLSPYNVGNQ-TVAAAASMWCDGGTEECLAGEDDGEL---AFPSLQGSAGRRPTDGTRSRGKPACDRPNGERYYDC

Query:  TGKPRTIPKP-QPCVVYTRGC
           P+  P P Q C  +TR C
Subjt:  TGKPRTIPKP-QPCVVYTRGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATCCTTCAAGAACCGGAGCTGTAATGGCAACGGCAATGGCAGTCCTGATTTTGATGCTGAGCGGAAGCAATTGTAAGGTTGCTTCTCTAAGTCCTTACAATGT
CGGCAACCAGACCGTCGCCGCTGCGGCATCGATGTGGTGCGATGGCGGCACAGAAGAATGTCTCGCCGGAGAAGACGACGGTGAGCTGGCATTTCCAAGCTTGCAAGGCA
GTGCAGGCCGTAGGCCTACTGACGGGACGAGAAGCCGGGGAAAACCTGCATGTGATCGGCCGAATGGAGAAAGATATTACGACTGTACCGGCAAACCACGCACAATTCCC
AAGCCCCAGCCTTGTGTCGTATATACTCGCGGCTGTAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACATCCTTCAAGAACCGGAGCTGTAATGGCAACGGCAATGGCAGTCCTGATTTTGATGCTGAGCGGAAGCAATTGTAAGGTTGCTTCTCTAAGTCCTTACAATGT
CGGCAACCAGACCGTCGCCGCTGCGGCATCGATGTGGTGCGATGGCGGCACAGAAGAATGTCTCGCCGGAGAAGACGACGGTGAGCTGGCATTTCCAAGCTTGCAAGGCA
GTGCAGGCCGTAGGCCTACTGACGGGACGAGAAGCCGGGGAAAACCTGCATGTGATCGGCCGAATGGAGAAAGATATTACGACTGTACCGGCAAACCACGCACAATTCCC
AAGCCCCAGCCTTGTGTCGTATATACTCGCGGCTGTAAATAA
Protein sequenceShow/hide protein sequence
MGHPSRTGAVMATAMAVLILMLSGSNCKVASLSPYNVGNQTVAAAASMWCDGGTEECLAGEDDGELAFPSLQGSAGRRPTDGTRSRGKPACDRPNGERYYDCTGKPRTIP
KPQPCVVYTRGCK