| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0041771.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 3.6e-42 | 39.82 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT--------------------------------------------------
KVDDP YCKYHRVISH VE+CFVLK+ ILKLA+E KIELD+DEVA++N
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT--------------------------------------------------
Query: ----------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYIDV
I K K R K +P + + K F QP++ + L E ++ E E C T+ ++V
Subjt: ----------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYIDV
Query: -------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLELKL
EE DN + +QRT +FDRIKP TT SVFQRLSM KEENQC ST R SAF+RLS+STSKK + TS FDRLK+TNDQ +R+M L+ K
Subjt: -------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLELKL
Query: VDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
E N D+K+HS + S MKRKFS+ INTE SL V
Subjt: VDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 5.0e-44 | 39.29 | Show/hide |
Query: MKKVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT------------------------------------------------
++KVDDP YCKYHR+ISHPVE+CFVLK+ ILKLA+E KI+LD+DEVA++N
Subjt: MKKVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT------------------------------------------------
Query: ------------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYI
I K K R K +P +++ +KF QP++ + L E F ++ E E C T+ +
Subjt: ------------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYI
Query: DV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLEL
+V EE DN + +QRT +FDRIKP TT SVFQRLSM +EENQC +ST TR SAF+RLS+S SKK + STS FDRLK+TNDQ +R+M +L+
Subjt: DV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLEL
Query: KLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
K E N D+K++S + S +KRK SI INTEGSL V
Subjt: KLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-43 | 48.98 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRK--------RSKKFSQPQQLVMLNETFSK
KVDDP YCKYHRVISHPVE+CFVLK+ ILKLA+E KIELD+DEVA++N I+ S ++ D LQ +R RS P++++ + +
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRK--------RSKKFSQPQQLVMLNETFSK
Query: TLHEKEKENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQP
++ E + Y +E +N + QRT +FDRIKPSTT SVFQRLS+ +EENQC TR S +RLS+ST KK + STS FDRLK+TNDQ
Subjt: TLHEKEKENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQP
Query: KRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
+R+M + + K E N D+K+HS + S MKRK + INTEGSL V
Subjt: KRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 3.4e-45 | 51.26 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPK-RKRSKKFSQPQQLVMLNETFSKTLHEKEK
KVDDP YCKYHRVISH +E+CFVLK+ ILKLA + KIELD+DEVA++N H N + P + F + +L T T E
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPK-RKRSKKFSQPQQLVMLNETFSKTLHEKEK
Query: ENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNL
+N SY EE DN + +QRT +FDRIKP TT SVFQRLSM +EE QC ST TR S F+RLS+STSKK + STS FDRLK+TNDQ +++M +L
Subjt: ENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNL
Query: ELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
+ K E N D+K+HS + S KRK S+ INTEGSL V
Subjt: ELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.7e-44 | 48.4 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKE
KVDDP YCKYHRVISHPVE+CFVLK+ ILKLA+E KI+LD+DE P + + + F QP++ + L E ++ E E
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKE
Query: N------CSTSYYIDV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKV
C T+ ++V EE DN + +QRT +FDRIKP TT VFQRLSM +EENQC ST TR SAF+RLS+STSKK + STS FDRLK+
Subjt: N------CSTSYYIDV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKV
Query: TNDQPKRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
NDQ +R+M +L+ K E N D+K+HS I S RK S+ IN EGSL V
Subjt: TNDQPKRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TJH2 Retrotransposon gag protein | 1.7e-42 | 39.82 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT--------------------------------------------------
KVDDP YCKYHRVISH VE+CFVLK+ ILKLA+E KIELD+DEVA++N
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT--------------------------------------------------
Query: ----------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYIDV
I K K R K +P + + K F QP++ + L E ++ E E C T+ ++V
Subjt: ----------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYIDV
Query: -------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLELKL
EE DN + +QRT +FDRIKP TT SVFQRLSM KEENQC ST R SAF+RLS+STSKK + TS FDRLK+TNDQ +R+M L+ K
Subjt: -------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLELKL
Query: VDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
E N D+K+HS + S MKRKFS+ INTE SL V
Subjt: VDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| A0A5A7U974 Retrotransposon gag protein | 2.4e-44 | 39.29 | Show/hide |
Query: MKKVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT------------------------------------------------
++KVDDP YCKYHR+ISHPVE+CFVLK+ ILKLA+E KI+LD+DEVA++N
Subjt: MKKVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLT------------------------------------------------
Query: ------------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYI
I K K R K +P +++ +KF QP++ + L E F ++ E E C T+ +
Subjt: ------------------------------------TIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKEN------CSTSYYI
Query: DV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLEL
+V EE DN + +QRT +FDRIKP TT SVFQRLSM +EENQC +ST TR SAF+RLS+S SKK + STS FDRLK+TNDQ +R+M +L+
Subjt: DV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNLEL
Query: KLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
K E N D+K++S + S +KRK SI INTEGSL V
Subjt: KLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 5.4e-44 | 48.98 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRK--------RSKKFSQPQQLVMLNETFSK
KVDDP YCKYHRVISHPVE+CFVLK+ ILKLA+E KIELD+DEVA++N I+ S ++ D LQ +R RS P++++ + +
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRK--------RSKKFSQPQQLVMLNETFSK
Query: TLHEKEKENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQP
++ E + Y +E +N + QRT +FDRIKPSTT SVFQRLS+ +EENQC TR S +RLS+ST KK + STS FDRLK+TNDQ
Subjt: TLHEKEKENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQP
Query: KRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
+R+M + + K E N D+K+HS + S MKRK + INTEGSL V
Subjt: KRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 8.3e-45 | 48.4 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKE
KVDDP YCKYHRVISHPVE+CFVLK+ ILKLA+E KI+LD+DE P + + + F QP++ + L E ++ E E
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPKRKRSKKFSQPQQLVMLNETFSKTLHEKEKE
Query: N------CSTSYYIDV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKV
C T+ ++V EE DN + +QRT +FDRIKP TT VFQRLSM +EENQC ST TR SAF+RLS+STSKK + STS FDRLK+
Subjt: N------CSTSYYIDV-------EEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKV
Query: TNDQPKRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
NDQ +R+M +L+ K E N D+K+HS I S RK S+ IN EGSL V
Subjt: TNDQPKRKMDNLELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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| A0A5D3CA53 Retrotransposon gag protein | 1.7e-45 | 51.26 | Show/hide |
Query: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPK-RKRSKKFSQPQQLVMLNETFSKTLHEKEK
KVDDP YCKYHRVISH +E+CFVLK+ ILKLA + KIELD+DEVA++N H N + P + F + +L T T E
Subjt: KVDDPKYCKYHRVISHPVERCFVLKDSILKLAKEGKIELDLDEVAESNLTTIKEKSKHLRKNDPKKLQPK-RKRSKKFSQPQQLVMLNETFSKTLHEKEK
Query: ENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNL
+N SY EE DN + +QRT +FDRIKP TT SVFQRLSM +EE QC ST TR S F+RLS+STSKK + STS FDRLK+TNDQ +++M +L
Subjt: ENCSTSYYIDVEEDDNFKKGEQRTCIFDRIKPSTTHPSVFQRLSMVATKEENQCSVSTSTRPSAFQRLSVSTSKKSQSSTSVFDRLKVTNDQPKRKMDNL
Query: ELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
+ K E N D+K+HS + S KRK S+ INTEGSL V
Subjt: ELKLVDEVNSDEKLHSSILSCMKRKFSILINTEGSLKV
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