; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000480 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000480
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:8291163..8299629
RNA-Seq ExpressionLag0000480
SyntenyLag0000480
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]1.1e-4331.56Show/hide
Query:  VADLLTASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWR
        V++L   SG WN EL+R+ F P +   IL++P      +D + WHF+K G YTV+SGY++    L       SSS  LS WW+  WK  IPNK K+FFW+
Subjt:  VADLLTASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWR

Query:  LCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVG--------------
             LPT   L+ R VDV++ C +C    ES  H+ W C    E+      + ++Q I  +   +++  +   VD   F  L++G              
Subjt:  LCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVG--------------

Query:  -AG-PSAGLVDWAANYLAVFRGASR-KYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAV
         AG  +A +V W  N+   FR A+   + E +   P     W   + G +K N DA++     +AG GV++RD  G  + + +       S ++ E  A 
Subjt:  -AG-PSAGLVDWAANYLAVFRGASR-KYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAV

Query:  VDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL
        ++G+ L +++G + VI+E+D+  V  LL D   V  +E+G ++  +    ++     Y   RRE N VAH +A+ AL
Subjt:  VDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL

TXG57245.1 hypothetical protein EZV62_018558 [Acer yangbiense]3.0e-3830Show/hide
Query:  RVADLLTASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFW
        +  DL   SG WN  L+ + F P +   IL +P      +D + WHF++ G Y+V+SGY++    +     + S+S  LSSWW+  WK  +PNK K+FFW
Subjt:  RVADLLTASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFW

Query:  RLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWAAN
        +     LPT   L+ R VDVL+ C+ CG   ES  HV W C+     L    W +LL      + +     V   V W            +A LV W  N
Subjt:  RLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDWAAN

Query:  YLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVI
        + + FR A+    + +         W P + G +K N D ++      AG GV++R+  G  + + +       S ++ E  A + G++L +++G + V+
Subjt:  YLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVI

Query:  LETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA
        LE+D+  V  LL +  +V  +E+G ++  +    ++      +  RR  N VAH LA+ A
Subjt:  LETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.3e-6137.14Show/hide
Query:  ARVADLLT-ASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLG-QRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKV
        +RV+ L+    G W  +++R  F+P E + IL+IP+     ED++IW++EK G+Y+V+SGY++          PSSSSSE +  WW G WKM IPNKIKV
Subjt:  ARVADLLT-ASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLG-QRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKV

Query:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP-------
        F WRLCL+RLPT   LS RGV++ N C  CG +GE  +H+FW CKF   + + S++  L       S   +LR+  + +  A FEEL V           
Subjt:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP-------

Query:  -------------SAGLVDWAANYLAVFRGASRKYGEGVGGVPRSA-VKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSS
                        LV+WA  Y   FR A  K     G V  +A + W P +EG YK N DA++      AG G+++ ++ G+VM +A    +++ S 
Subjt:  -------------SAGLVDWAANYLAVFRGASRKYGEGVGGVPRSA-VKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSS

Query:  DLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL
        D+AE +A V+G++L  E+G                   PA+ DLSE G +V +A+   +  +   +NF +REGN+ AH LAR AL
Subjt:  DLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL

XP_023880912.1 uncharacterized protein LOC111993298 [Quercus suber]1.7e-4132.99Show/hide
Query:  GKG----VRSPVTLDPGARVADLLTASGQ-WNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSS
        GKG    V   V    GA+VA L+  + + WN +LL  HF   EV  I  IPL  T  ED++IW     G Y VKSGY++  +  ++   S S S   S+
Subjt:  GKG----VRSPVTLDPGARVADLLTASGQ-WNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSS

Query:  WWKGCWKMGIPNKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVD----
        +WK  WK+ +PNKIK F WR+C   LPT D L  R +     C  C    E+  H  W C+  +E+       V  +      ML L+  V  R +    
Subjt:  WWKGCWKMGIPNKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVD----

Query:  --------WAKFEELVVG--AGPSAGLVDWAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAA
                W    +L +     PS  L + A +YL  F+    K+    G   +   KW P  +G +KAN D A   +   AG GV+VRD  G V+ + A
Subjt:  --------WAKFEELVVG--AGPSAGLVDWAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAA

Query:  VSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL
            ++GS ++ E LA     + VVE+G      E DS  V++ L+  A    S +GV++ +      +   F ++ TRR+GN VAH LA+ A+
Subjt:  VSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL

XP_023889222.1 LOW QUALITY PROTEIN: uncharacterized protein LOC112001275 [Quercus suber]3.0e-3829.31Show/hide
Query:  VEGAVFSQRGLPECKGGVPTFVYLEEPDLGEGAFGKGVRSPVTLDPGARVADLLTASGQ-WNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCG
        ++G V  Q+G+    G   +     +  L + +  K +  P   D   +V+ L+   GQ W++E++  +F P E   I  IPL      D   W     G
Subjt:  VEGAVFSQRGLPECKGGVPTFVYLEEPDLGEGAFGKGVRSPVTLDPGARVADLLTASGQ-WNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCG

Query:  IYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREM-LMG
        IY+VKSGY+L         P SS        WKG W + +PN++K   WR   + LP+   L  R + +   C  CG   E+ +H  W C    ++  + 
Subjt:  IYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREM-LMG

Query:  SEWEVLLQNIQAN--SMLNLLRDVKDRVD---------WAKFEELVVG--AGPSAGLVDWAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKAN
          W V   ++ A+   +L L  +  + VD         W +  +L VG  A P   +   A+  L VF  +S    +     P    KW P    W K N
Subjt:  SEWEVLLQNIQAN--SMLNLLRDVKDRVD---------WAKFEELVVG--AGPSAGLVDWAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKAN

Query:  VDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTH
         D A   DLS AG G ++R+++G VM +         S ++ E LA    +    E+GF  +I+E DS  V   L        S +G +V + +   S+ 
Subjt:  VDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTH

Query:  MQFRYNFTRREGNRVAHELARFA
            +N TRR+GNRVAH LAR A
Subjt:  MQFRYNFTRREGNRVAHELARFA

TrEMBL top hitse value%identityAlignment
A0A2N9GC56 Reverse transcriptase domain-containing protein4.5e-4032.46Show/hide
Query:  ARVADLL-TASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAH-TPSSSSSEALSSWWKGCWKMGIPNKIKV
        A VADL+    G W EE++R  FSP +V SIL  PL  +L +D +IW     G ++VKS Y      +     P SS+S+ L  +WK  W + +P KI+ 
Subjt:  ARVADLL-TASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAH-TPSSSSSEALSSWWKGCWKMGIPNKIKV

Query:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLN-----------LLRDVKDRVDW--------
        F WRL    LPT D L  R +     C +CG   E+  H+F QC + R++  G +  + L N   + M++           +   +   V W        
Subjt:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLN-----------LLRDVKDRVDW--------

Query:  AKFEELVVGAGPSAGLVDWAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDL
        A F ++V    P+    D A  Y+  F  A+      V  + R+ + W+   EGWYK N+D A   DL + G GVV+R+E G  + +     D    +  
Subjt:  AKFEELVVGAGPSAGLVDWAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDL

Query:  AEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA
        AE LA +  +    E+    ++ E D  +V   LQ P   D + VG + S AR + S    F  +   REGN VAH LA+FA
Subjt:  AEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA

A0A2N9IUU4 Uncharacterized protein6.5e-3933.06Show/hide
Query:  ARVADLL-TASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAH-TPSSSSSEALSSWWKGCWKMGIPNKIKV
        A VADL+    G W EE++R  FSP +V SIL  PL  +L +D +IW     G ++VKS Y      +     P SS+S+ L  +WK  W + +P KI+ 
Subjt:  ARVADLL-TASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAH-TPSSSSSEALSSWWKGCWKMGIPNKIKV

Query:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDW
        F WRL    LPT D L  R +     C +CG   E+  H+F QC + R+     E  + +  + + S+ N+          A F ++V    P+    D 
Subjt:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSAGLVDW

Query:  AANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFA
        A  Y+  F  A+      V  + R+ + W+   EGWYK N+D A   DL + G GVV+R+E G  + +     D    +   E LA +  +    E+   
Subjt:  AANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLVVEMGFA

Query:  RVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA
         ++ E D  +V   LQ P   D + VG + S AR + S    F  +   REGN VAH LA+FA
Subjt:  RVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA

A0A2N9J3G5 Uncharacterized protein5.3e-4133.06Show/hide
Query:  TLDPGARVADLL-TASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEA-LSSWWKGCWKMGIP
        T+   A VA+L+ T    W E+L+R  F P +   IL  PL+ TLS D +IW     G +TVKS Y +    +S H  +  S+++    +WK  W + +P
Subjt:  TLDPGARVADLL-TASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEA-LSSWWKGCWKMGIP

Query:  NKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSA
         KI  F WR+C+  LPT D LS R V     C +CG   ES  H+F QC + R++   SEW   L +   ++ L+ +  +     W KF+  VV A  + 
Subjt:  NKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGPSA

Query:  GLVD-WAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLV
         L   W    LA+F+   +   +    V R +++W+   EGWYK N+D A   D+ + G GVV+R++ G  + +     D+   +  AE LA +  +   
Subjt:  GLVD-WAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAVVDGMRLV

Query:  VEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA
         E+    +I E D  +V   L      DLS +G L + AR + S           REGN VAH LA++A
Subjt:  VEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFA

A0A5C7H0P0 Uncharacterized protein5.1e-4431.56Show/hide
Query:  VADLLTASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWR
        V++L   SG WN EL+R+ F P +   IL++P      +D + WHF+K G YTV+SGY++    L       SSS  LS WW+  WK  IPNK K+FFW+
Subjt:  VADLLTASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWR

Query:  LCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVG--------------
             LPT   L+ R VDV++ C +C    ES  H+ W C    E+      + ++Q I  +   +++  +   VD   F  L++G              
Subjt:  LCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVG--------------

Query:  -AG-PSAGLVDWAANYLAVFRGASR-KYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAV
         AG  +A +V W  N+   FR A+   + E +   P     W   + G +K N DA++     +AG GV++RD  G  + + +       S ++ E  A 
Subjt:  -AG-PSAGLVDWAANYLAVFRGASR-KYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLAV

Query:  VDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL
        ++G+ L +++G + VI+E+D+  V  LL D   V  +E+G ++  +    ++     Y   RRE N VAH +A+ AL
Subjt:  VDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL

A0A6J1DAR4 uncharacterized protein LOC1110189542.1e-6137.14Show/hide
Query:  ARVADLLT-ASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLG-QRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKV
        +RV+ L+    G W  +++R  F+P E + IL+IP+     ED++IW++EK G+Y+V+SGY++          PSSSSSE +  WW G WKM IPNKIKV
Subjt:  ARVADLLT-ASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLG-QRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKV

Query:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP-------
        F WRLCL+RLPT   LS RGV++ N C  CG +GE  +H+FW CKF   + + S++  L       S   +LR+  + +  A FEEL V           
Subjt:  FFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVKDRVDWAKFEELVVGAGP-------

Query:  -------------SAGLVDWAANYLAVFRGASRKYGEGVGGVPRSA-VKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSS
                        LV+WA  Y   FR A  K     G V  +A + W P +EG YK N DA++      AG G+++ ++ G+VM +A    +++ S 
Subjt:  -------------SAGLVDWAANYLAVFRGASRKYGEGVGGVPRSA-VKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSS

Query:  DLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL
        D+AE +A V+G++L  E+G                   PA+ DLSE G +V +A+   +  +   +NF +REGN+ AH LAR AL
Subjt:  DLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.5e-0626.92Show/hide
Query:  EDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFW
        +D  IW   K  ++   + +   + +L+ H  +      +  W+K  W      K     W +   RL T D+L + G+ +  VC+LC  H ES  H+F+
Subjt:  EDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFW

Query:  QCKF
        +C F
Subjt:  QCKF

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.4e-0729.81Show/hide
Query:  VHWEKPPPNTWKLNSDAAWIEKEGRGGLGWIVRDSNESLICCGLKQISKNWSIKNLEACAMLEGIKQVLDTCNRLGI-ALEVESDALEVVNVLNDVSDDL
        V W+ PP    K N+DA W  +  R G+GWI+R+ +  ++  G + + +  ++   E    LE ++  + T +R     +  ESDA  +VN+LN  SDD 
Subjt:  VHWEKPPPNTWKLNSDAAWIEKEGRGGLGWIVRDSNESLICCGLKQISKNWSIKNLEACAMLEGIKQVLDTCNRLGI-ALEVESDALEVVNVLNDVSDDL

Query:  -SDLKVFTDEIQSLAARAPSMRFLHCNRLLNTNAHCVARSAAGCG-----LSSLVRSSLRS
           L+   ++IQ L      ++F    R  N  A  +AR +         L S+V   LRS
Subjt:  -SDLKVFTDEIQSLAARAPSMRFLHCNRLLNTNAHCVARSAAGCG-----LSSLVRSSLRS

AT3G09510.1 Ribonuclease H-like superfamily protein9.6e-1921.67Show/hide
Query:  WNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVD
        W++  +       +   I  I L  +   DK+IW++   G YTV+SGY L     S + P+ +            W + I  K+K F WR   + L T +
Subjt:  WNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQRTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVD

Query:  KLSARGVDVLNVCVLCGWHGESCMHVFWQCKF------------FREMLMGSEWEVLLQNIQANSMLNLLRD--------------------VKDRVDWA
        +L+ RG+ +   C  C    ES  H  + C F             R  LM +++E  + NI     LN ++D                     ++ V + 
Subjt:  KLSARGVDVLNVCVLCGWHGESCMHVFWQCKF------------FREMLMGSEWEVLLQNIQANSMLNLLRD--------------------VKDRVDWA

Query:  KFEELVVGAGPSAGLVDWAA---NYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSS
        KF E      PS  ++   A   ++L   + + +K       +  + ++W      + K N DA +      A  G ++R+  G  +   ++   H  + 
Subjt:  KFEELVVGAGPSAGLVDWAA---NYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSS

Query:  DLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARF
          AE  A++  ++     G+ +V +E D + + +L+   +    S +   + +     +     ++ F RR+GN++AH LA++
Subjt:  DLAEGLAVVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARF

AT4G29090.1 Ribonuclease H-like superfamily protein3.1e-0923.7Show/hide
Query:  LCFACVGYFVVFMWGFVS---SVGGRWVEGL-INQFWLAIASHRFQCGSCVRFELGNRNRLMAGALVDARAAQSGLVWTVREFTNRAKYHNYPAATKIIQ
        L F C   F    W   S    +GG W + + +N +W+              F LGN N         A      L+W + +  N   +       + + 
Subjt:  LCFACVGYFVVFMWGFVS---SVGGRWVEGL-INQFWLAIASHRFQCGSCVRFELGNRNRLMAGALVDARAAQSGLVWTVREFTNRAKYHNYPAATKIIQ

Query:  SNIEASLIEWESSYLKTHYPNRPRSPASHVHWEKPPPNTW-KLNSDAAWIEKEGRGGLGWIVRDSNESLICCGLKQISKNWSIKNLEACAMLEGIKQVLD
           E  L EW           +P+   S     +PPP+ W K N+DA W     R G+GW++R+    +   G + + K  S+   E    LE ++  + 
Subjt:  SNIEASLIEWESSYLKTHYPNRPRSPASHVHWEKPPPNTW-KLNSDAAWIEKEGRGGLGWIVRDSNESLICCGLKQISKNWSIKNLEACAMLEGIKQVLD

Query:  TCNRLGIALEV-ESDALEVVNVLNDVSDDLSDLKVFTDEIQSLAARAPSMRFLHCNRLLNTNAHCVARSA
        + +R      + ESD+  ++ +LN+  +    LK    ++Q L ++   ++F+   R  NT A  VAR +
Subjt:  TCNRLGIALEV-ESDALEVVNVLNDVSDDLSDLKVFTDEIQSLAARAPSMRFLHCNRLLNTNAHCVARSA

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.5e-0625.25Show/hide
Query:  LVWTVREFTNRAKYHNYPAATKIIQSNIEASL---IEWESSYLKTHYP--NRPRSPASHVHWEKPPPNTWKLNSDAAWIEKEGRGGLGWIVRDSNESLIC
        L+W + +  N   +++    TK  Q+ +E +L    EW  + +       NR   P+ +  W  P  +  K N DA+  E+    GLGWI+R+S  ++I 
Subjt:  LVWTVREFTNRAKYHNYPAATKIIQSNIEASL---IEWESSYLKTHYP--NRPRSPASHVHWEKPPPNTWKLNSDAAWIEKEGRGGLGWIVRDSNESLIC

Query:  CGLKQISKNWSIKNLEACAMLEGIKQVLDTCNRLGIALEVESDALEVVNVLNDVSDDLSDLKVFTDEIQSLAARAPSMRFLHCNRLLNTNAHCVARSA
        CG+ +     + +  E   ++  I+      ++  I    E D   +  ++N  S +   L+ F D IQS      S+ F   +R  N  A  +A+ A
Subjt:  CGLKQISKNWSIKNLEACAMLEGIKQVLDTCNRLGIALEVESDALEVVNVLNDVSDDLSDLKVFTDEIQSLAARAPSMRFLHCNRLLNTNAHCVARSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAAGTGTGAGGCCATAGAAGGGGAGAAGAACAGGCGAAGCGGCGATTGCAAGAGTCAGGCGGCTTCCACGCGAAAACCAAGAGAGAGGGAGGGATTCGCAAACAG
GCGGCGACTCGAACTGGGCAACAGTGGCTGCGCTGCTGCTGGCACAGGGGTAGCGGCGCGACGAGGTCGCCGGTGGCCAACAGCGGCGAGCAGTGGCCGGTCGTCGACAA
GGAGATTTGAAGAAGATGAAGAAAGGGAATTCAAATATGCCATTGACAAAGATGAAAACCATGTGTTGGAAGATTGTTCAGCACCCTTCCTCGTTTCTCTCCCGTGTGTT
GAAGGGGCGGTATTTTCCCAGAGAGGACTTCCTGAATGCAAGGGTGGGGTCCCGACCTTCGTATATTTGGAGGAGCCTGATTTGGGGGAGGGAGCTTTTGGGAAAGGGGT
ACGGTCCCCGGTTACTTTGGATCCTGGTGCTCGAGTGGCTGATCTTCTTACAGCTTCGGGCCAGTGGAACGAGGAACTCCTGCGACATCATTTTAGCCCTGGTGAGGTAC
GCTCTATCCTTACTATCCCACTGCGGCATACTTTGTCTGAGGATAAAGTCATTTGGCATTTTGAGAAGTGTGGGATCTACACGGTTAAAAGTGGGTACCGGCTTGGCCAA
AGGACTTTGTCTGCCCATACCCCTTCTTCGTCTTCAAGTGAGGCGTTGTCTAGCTGGTGGAAGGGGTGTTGGAAGATGGGGATCCCAAACAAAATCAAGGTTTTCTTTTG
GAGGCTTTGTTTGGAGCGATTGCCTACTGTTGACAAGTTGAGTGCTAGGGGCGTTGATGTCTTGAATGTGTGTGTGCTCTGTGGTTGGCATGGGGAGTCATGCATGCATG
TGTTTTGGCAATGCAAATTTTTTCGTGAAATGTTGATGGGATCAGAGTGGGAGGTCTTGTTGCAGAATATCCAGGCAAACTCTATGCTTAATTTGCTTAGGGACGTGAAG
GATAGGGTCGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGGGGCGGGCCCCTCAGCAGGGCTTGTGGATTGGGCGGCGAACTATCTGGCTGTTTTCCGAGGGGCCTCCCG
GAAGTATGGCGAGGGTGTTGGAGGGGTGCCTCGAAGTGCAGTAAAATGGACCCCACTGGAGGAGGGATGGTATAAGGCGAACGTGGATGCTGCATACTGTGGGGACCTGT
CTCGAGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGAAGTTCAGATTTGGCAGAGGGTCTAGCG
GTGGTGGACGGAATGAGACTTGTGGTGGAGATGGGTTTTGCTCGAGTTATCCTTGAGACTGACTCTAGGCGGGTGTTTTCGCTGTTGCAAGATCCTGCGATGGTGGATCT
GTCTGAGGTCGGTGTTCTAGTTTCTGAGGCTCGAAGGGAGAGGTCTACACATATGCAGTTCAGGTACAACTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTAG
CTCGCTTTGCATTAAGAGAGGGAGGCTGTAGGTGGCGGCGGATGCGTGTCATGGATATGGCTTATGGGTTTGTGTATGTTCTGGCTAAAGGGTGGGTGTGTGCTTGGTTA
GTGGATCCTAGGTTGGAGGTTGGATTCCCTGAACATCGTTTTCTATGTTTTGCATGTGTCGGTTATTTTGTGGTTTTCATGTGGGGCTTTGTGTCCAGTGTAGGGGGAAG
ATGGGTGGAGGGTCTTATAAATCAGTTCTGGCTTGCAATAGCTTCTCACAGGTTTCAATGTGGGAGTTGTGTCCGCTTTGAGTTGGGTAACCGGAATCGCTTAATGGCTG
GCGCGTTGGTTGATGCCCGTGCTGCTCAGAGTGGCTTGGTGTGGACTGTTCGAGAATTCACGAACAGAGCAAAATATCACAACTACCCAGCAGCAACAAAAATCATTCAG
AGCAACATTGAAGCAAGCTTAATAGAATGGGAGTCCTCTTACCTCAAGACCCATTATCCGAATAGGCCAAGGAGCCCCGCGAGTCACGTCCACTGGGAGAAACCACCGCC
GAACACCTGGAAACTAAATTCCGACGCTGCCTGGATTGAGAAGGAAGGTCGAGGAGGGCTCGGATGGATCGTTCGCGACTCGAATGAATCCTTGATCTGTTGCGGTTTGA
AGCAAATCAGCAAGAATTGGTCCATAAAGAATTTGGAAGCGTGTGCAATGCTAGAAGGCATCAAACAAGTTTTGGATACCTGTAATCGGTTGGGGATTGCGCTGGAAGTC
GAATCAGATGCGCTCGAGGTCGTCAATGTTCTCAACGACGTGTCGGATGATCTTTCAGATTTGAAGGTTTTTACGGATGAAATCCAATCCCTTGCTGCCCGTGCGCCTTC
CATGCGTTTTCTTCATTGTAATCGCCTTTTGAACACAAACGCGCACTGTGTTGCGAGAAGCGCAGCCGGCTGTGGCCTATCATCTCTGGTGAGATCTAGCCTCCGGTCGC
CTTCTTCGCAGGAAAGGGAGATGTTCCGGCGGCACGAGTCGTCTTCTTCTCCCCGAAATCCAAGCGTTTCAGATCTTCATCCTCGCGTTTCAGATCTCCTCGGCATACTC
ACGTTTCAGTCGATTTCTTCTCCCGACATCCTCGCAGTTTCAAATCTACACCCATTTAGACAACTGACATCCTCGCATTTCAGATCTGCAGATCTGGGTTCGTTTCCGAT
CTGTAGATCTGGGTTCGTTTCCGACGAGAAGAAACAAACGAAGACGACGGCGAGACGAACAACACTCAAGGGGGCTGCGATGCTACACGTGAGGAAAAGAAGAAAACTTC
AGATGGGCTGGCAGCGCGAGCTTGATCGAACAAGGCTGGTGGGAATGGAGGCTGGTGCGAGGGAGACTTTCGGCGAAACAGAAGACAAAAGGGGGCTGCTCGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAAGTGTGAGGCCATAGAAGGGGAGAAGAACAGGCGAAGCGGCGATTGCAAGAGTCAGGCGGCTTCCACGCGAAAACCAAGAGAGAGGGAGGGATTCGCAAACAG
GCGGCGACTCGAACTGGGCAACAGTGGCTGCGCTGCTGCTGGCACAGGGGTAGCGGCGCGACGAGGTCGCCGGTGGCCAACAGCGGCGAGCAGTGGCCGGTCGTCGACAA
GGAGATTTGAAGAAGATGAAGAAAGGGAATTCAAATATGCCATTGACAAAGATGAAAACCATGTGTTGGAAGATTGTTCAGCACCCTTCCTCGTTTCTCTCCCGTGTGTT
GAAGGGGCGGTATTTTCCCAGAGAGGACTTCCTGAATGCAAGGGTGGGGTCCCGACCTTCGTATATTTGGAGGAGCCTGATTTGGGGGAGGGAGCTTTTGGGAAAGGGGT
ACGGTCCCCGGTTACTTTGGATCCTGGTGCTCGAGTGGCTGATCTTCTTACAGCTTCGGGCCAGTGGAACGAGGAACTCCTGCGACATCATTTTAGCCCTGGTGAGGTAC
GCTCTATCCTTACTATCCCACTGCGGCATACTTTGTCTGAGGATAAAGTCATTTGGCATTTTGAGAAGTGTGGGATCTACACGGTTAAAAGTGGGTACCGGCTTGGCCAA
AGGACTTTGTCTGCCCATACCCCTTCTTCGTCTTCAAGTGAGGCGTTGTCTAGCTGGTGGAAGGGGTGTTGGAAGATGGGGATCCCAAACAAAATCAAGGTTTTCTTTTG
GAGGCTTTGTTTGGAGCGATTGCCTACTGTTGACAAGTTGAGTGCTAGGGGCGTTGATGTCTTGAATGTGTGTGTGCTCTGTGGTTGGCATGGGGAGTCATGCATGCATG
TGTTTTGGCAATGCAAATTTTTTCGTGAAATGTTGATGGGATCAGAGTGGGAGGTCTTGTTGCAGAATATCCAGGCAAACTCTATGCTTAATTTGCTTAGGGACGTGAAG
GATAGGGTCGACTGGGCTAAGTTTGAAGAGCTTGTGGTGGGGGCGGGCCCCTCAGCAGGGCTTGTGGATTGGGCGGCGAACTATCTGGCTGTTTTCCGAGGGGCCTCCCG
GAAGTATGGCGAGGGTGTTGGAGGGGTGCCTCGAAGTGCAGTAAAATGGACCCCACTGGAGGAGGGATGGTATAAGGCGAACGTGGATGCTGCATACTGTGGGGACCTGT
CTCGAGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTGGGGCGAGTCATGCTGTCAGCTGCTGTTAGTCATGACCATGTGGGAAGTTCAGATTTGGCAGAGGGTCTAGCG
GTGGTGGACGGAATGAGACTTGTGGTGGAGATGGGTTTTGCTCGAGTTATCCTTGAGACTGACTCTAGGCGGGTGTTTTCGCTGTTGCAAGATCCTGCGATGGTGGATCT
GTCTGAGGTCGGTGTTCTAGTTTCTGAGGCTCGAAGGGAGAGGTCTACACATATGCAGTTCAGGTACAACTTTACAAGAAGAGAAGGAAACCGGGTTGCCCATGAGCTAG
CTCGCTTTGCATTAAGAGAGGGAGGCTGTAGGTGGCGGCGGATGCGTGTCATGGATATGGCTTATGGGTTTGTGTATGTTCTGGCTAAAGGGTGGGTGTGTGCTTGGTTA
GTGGATCCTAGGTTGGAGGTTGGATTCCCTGAACATCGTTTTCTATGTTTTGCATGTGTCGGTTATTTTGTGGTTTTCATGTGGGGCTTTGTGTCCAGTGTAGGGGGAAG
ATGGGTGGAGGGTCTTATAAATCAGTTCTGGCTTGCAATAGCTTCTCACAGGTTTCAATGTGGGAGTTGTGTCCGCTTTGAGTTGGGTAACCGGAATCGCTTAATGGCTG
GCGCGTTGGTTGATGCCCGTGCTGCTCAGAGTGGCTTGGTGTGGACTGTTCGAGAATTCACGAACAGAGCAAAATATCACAACTACCCAGCAGCAACAAAAATCATTCAG
AGCAACATTGAAGCAAGCTTAATAGAATGGGAGTCCTCTTACCTCAAGACCCATTATCCGAATAGGCCAAGGAGCCCCGCGAGTCACGTCCACTGGGAGAAACCACCGCC
GAACACCTGGAAACTAAATTCCGACGCTGCCTGGATTGAGAAGGAAGGTCGAGGAGGGCTCGGATGGATCGTTCGCGACTCGAATGAATCCTTGATCTGTTGCGGTTTGA
AGCAAATCAGCAAGAATTGGTCCATAAAGAATTTGGAAGCGTGTGCAATGCTAGAAGGCATCAAACAAGTTTTGGATACCTGTAATCGGTTGGGGATTGCGCTGGAAGTC
GAATCAGATGCGCTCGAGGTCGTCAATGTTCTCAACGACGTGTCGGATGATCTTTCAGATTTGAAGGTTTTTACGGATGAAATCCAATCCCTTGCTGCCCGTGCGCCTTC
CATGCGTTTTCTTCATTGTAATCGCCTTTTGAACACAAACGCGCACTGTGTTGCGAGAAGCGCAGCCGGCTGTGGCCTATCATCTCTGGTGAGATCTAGCCTCCGGTCGC
CTTCTTCGCAGGAAAGGGAGATGTTCCGGCGGCACGAGTCGTCTTCTTCTCCCCGAAATCCAAGCGTTTCAGATCTTCATCCTCGCGTTTCAGATCTCCTCGGCATACTC
ACGTTTCAGTCGATTTCTTCTCCCGACATCCTCGCAGTTTCAAATCTACACCCATTTAGACAACTGACATCCTCGCATTTCAGATCTGCAGATCTGGGTTCGTTTCCGAT
CTGTAGATCTGGGTTCGTTTCCGACGAGAAGAAACAAACGAAGACGACGGCGAGACGAACAACACTCAAGGGGGCTGCGATGCTACACGTGAGGAAAAGAAGAAAACTTC
AGATGGGCTGGCAGCGCGAGCTTGATCGAACAAGGCTGGTGGGAATGGAGGCTGGTGCGAGGGAGACTTTCGGCGAAACAGAAGACAAAAGGGGGCTGCTCGTCTAA
Protein sequenceShow/hide protein sequence
MLKCEAIEGEKNRRSGDCKSQAASTRKPREREGFANRRRLELGNSGCAAAGTGVAARRGRRWPTAASSGRSSTRRFEEDEEREFKYAIDKDENHVLEDCSAPFLVSLPCV
EGAVFSQRGLPECKGGVPTFVYLEEPDLGEGAFGKGVRSPVTLDPGARVADLLTASGQWNEELLRHHFSPGEVRSILTIPLRHTLSEDKVIWHFEKCGIYTVKSGYRLGQ
RTLSAHTPSSSSSEALSSWWKGCWKMGIPNKIKVFFWRLCLERLPTVDKLSARGVDVLNVCVLCGWHGESCMHVFWQCKFFREMLMGSEWEVLLQNIQANSMLNLLRDVK
DRVDWAKFEELVVGAGPSAGLVDWAANYLAVFRGASRKYGEGVGGVPRSAVKWTPLEEGWYKANVDAAYCGDLSRAGAGVVVRDEVGRVMLSAAVSHDHVGSSDLAEGLA
VVDGMRLVVEMGFARVILETDSRRVFSLLQDPAMVDLSEVGVLVSEARRERSTHMQFRYNFTRREGNRVAHELARFALREGGCRWRRMRVMDMAYGFVYVLAKGWVCAWL
VDPRLEVGFPEHRFLCFACVGYFVVFMWGFVSSVGGRWVEGLINQFWLAIASHRFQCGSCVRFELGNRNRLMAGALVDARAAQSGLVWTVREFTNRAKYHNYPAATKIIQ
SNIEASLIEWESSYLKTHYPNRPRSPASHVHWEKPPPNTWKLNSDAAWIEKEGRGGLGWIVRDSNESLICCGLKQISKNWSIKNLEACAMLEGIKQVLDTCNRLGIALEV
ESDALEVVNVLNDVSDDLSDLKVFTDEIQSLAARAPSMRFLHCNRLLNTNAHCVARSAAGCGLSSLVRSSLRSPSSQEREMFRRHESSSSPRNPSVSDLHPRVSDLLGIL
TFQSISSPDILAVSNLHPFRQLTSSHFRSADLGSFPICRSGFVSDEKKQTKTTARRTTLKGAAMLHVRKRRKLQMGWQRELDRTRLVGMEAGARETFGETEDKRGLLV