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Lag0000484 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000484
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionMADS-box transcription factor
Genome locationchr4:8508175..8509334
RNA-Seq ExpressionLag0000484
SyntenyLag0000484
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AXR70631.1 MADS-box 9 [Momordica dioica]1.4e-5099.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+R
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQRTQR
Subjt:  FESLQRTQR

KAG7018196.1 Developmental protein SEPALLATA 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-5099.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQ TQR
Subjt:  FESLQRTQR

NP_001267667.1 developmental protein SEPALLATA 2-like [Cucumis sativus]1.4e-5099.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+R
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQRTQR
Subjt:  FESLQRTQR

XP_022155022.1 developmental protein SEPALLATA 1 [Momordica charantia]1.4e-5099.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+R
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQRTQR
Subjt:  FESLQRTQR

XP_022955902.1 developmental protein SEPALLATA 1 isoform X2 [Cucurbita moschata]3.2e-5099.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQ TQR
Subjt:  FESLQRTQR

TrEMBL top hitse value%identityAlignment
A0A346NTN8 MADS-box 96.9e-5199.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+R
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQRTQR
Subjt:  FESLQRTQR

A0A6J1DN93 developmental protein SEPALLATA 16.9e-5199.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+R
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQRTQR
Subjt:  FESLQRTQR

A0A6J1GUW6 developmental protein SEPALLATA 1 isoform X21.5e-5099.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQ TQR
Subjt:  FESLQRTQR

A0A6J1J038 developmental protein SEPALLATA 1 isoform X21.5e-5099.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQ TQR
Subjt:  FESLQRTQR

Q9SEG4 CAGL26.9e-5199.08Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLK+R
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
        FESLQRTQR
Subjt:  FESLQRTQR

SwissProt top hitse value%identityAlignment
O65874 MADS-box transcription factor 13.0e-4384.07Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVE---VTKPAKELE-SSYREYLK
        MGRGRVELKR+ENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCSTS+MLKTLERYQKC+YGA E    +K A  LE SS +EYLK
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVE---VTKPAKELE-SSYREYLK

Query:  LKARFESLQRTQR
        LKAR+ESLQR+QR
Subjt:  LKARFESLQRTQR

P29382 Developmental protein SEPALLATA 12.4e-4890Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA

Query:  RFESLQRTQR
        R+E+LQR QR
Subjt:  RFESLQRTQR

P29384 Developmental protein SEPALLATA 21.1e-4890Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCSTSNMLKTLERYQKCSYG++EV  KPAKELE+SYREYLKLK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA

Query:  RFESLQRTQR
        R+E+LQR QR
Subjt:  RFESLQRTQR

Q39685 MADS-box protein CMB19.3e-4583.49Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALI+FSNRGKLYEFCSTS M KTLERYQ+CSYG++E ++P+KE ESSY+EYLKLKA+
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKAR

Query:  FESLQRTQR
         + LQR+ R
Subjt:  FESLQRTQR

Q8LLR2 Agamous-like MADS-box protein MADS28.1e-4991.82Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELE-SSYREYLKLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFS RGKLYEFCS+S+MLKTLERYQKCSYGAVEV++P+KELE SSYREYLKLK+
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELE-SSYREYLKLKA

Query:  RFESLQRTQR
        +FESLQRTQR
Subjt:  RFESLQRTQR

Arabidopsis top hitse value%identityAlignment
AT1G24260.1 K-box region and MADS-box transcription factor family protein1.4e-4381.25Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKEL---ESSYREYLKL
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+S+ML+TLERYQKC+YGA E   P++E     SS +EYLKL
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKEL---ESSYREYLKL

Query:  KARFESLQRTQR
        K R+++LQRTQR
Subjt:  KARFESLQRTQR

AT1G24260.2 K-box region and MADS-box transcription factor family protein1.8e-4380.53Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKEL----ESSYREYLK
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+S+ML+TLERYQKC+YGA E   P++E      SS +EYLK
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKEL----ESSYREYLK

Query:  LKARFESLQRTQR
        LK R+++LQRTQR
Subjt:  LKARFESLQRTQR

AT3G02310.1 K-box region and MADS-box transcription factor family protein7.5e-5090Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEV+LI+FSNRGKLYEFCSTSNMLKTLERYQKCSYG++EV  KPAKELE+SYREYLKLK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA

Query:  RFESLQRTQR
        R+E+LQR QR
Subjt:  RFESLQRTQR

AT5G15800.1 K-box region and MADS-box transcription factor family protein1.7e-4990Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA

Query:  RFESLQRTQR
        R+E+LQR QR
Subjt:  RFESLQRTQR

AT5G15800.2 K-box region and MADS-box transcription factor family protein1.7e-4990Show/hide
Query:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA
        MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS+SNMLKTL+RYQKCSYG++EV  KPAKELE+SYREYLKLK 
Subjt:  MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEV-TKPAKELESSYREYLKLKA

Query:  RFESLQRTQR
        R+E+LQR QR
Subjt:  RFESLQRTQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAGGAAGAGTGGAATTGAAGAGAATAGAGAACAAGATAAACAGGCAAGTGACATTTGCAAAGAGAAGAAATGGACTGTTGAAGAAAGCTTATGAGCTTTCTGT
GCTTTGTGATGCTGAAGTTGCTCTCATCATCTTCTCTAATCGTGGCAAGCTCTATGAGTTCTGTAGTACTTCCAACATGCTCAAAACACTTGAAAGGTACCAAAAATGCA
GTTATGGAGCGGTGGAGGTCACGAAACCAGCCAAAGAGCTCGAGAGTAGCTATAGAGAATATTTGAAGCTGAAGGCTAGGTTTGAGTCACTACAAAGAACTCAGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAGGAAGAGTGGAATTGAAGAGAATAGAGAACAAGATAAACAGGCAAGTGACATTTGCAAAGAGAAGAAATGGACTGTTGAAGAAAGCTTATGAGCTTTCTGT
GCTTTGTGATGCTGAAGTTGCTCTCATCATCTTCTCTAATCGTGGCAAGCTCTATGAGTTCTGTAGTACTTCCAACATGCTCAAAACACTTGAAAGGTACCAAAAATGCA
GTTATGGAGCGGTGGAGGTCACGAAACCAGCCAAAGAGCTCGAGAGTAGCTATAGAGAATATTTGAAGCTGAAGGCTAGGTTTGAGTCACTACAAAGAACTCAGAGGTGA
Protein sequenceShow/hide protein sequence
MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSTSNMLKTLERYQKCSYGAVEVTKPAKELESSYREYLKLKARFESLQRTQR