; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000485 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000485
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptiondevelopmental protein SEPALLATA 1
Genome locationchr4:8515947..8518509
RNA-Seq ExpressionLag0000485
SyntenyLag0000485
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAC37398.1 MADS2 protein, partial [Cucumis sativus]2.0e-4489.22Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNIRLTW+GGDQSMSYGPQNAQTQGFFQPL+CNPTLQIGY ++VSDQIT+TT P+HAQQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

NP_001267667.1 developmental protein SEPALLATA 2-like [Cucumis sativus]2.0e-4489.22Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNIRLTW+GGDQSMSYGPQNAQTQGFFQPL+CNPTLQIGY ++VSDQIT+TT P+HAQQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

XP_022155022.1 developmental protein SEPALLATA 1 [Momordica charantia]3.7e-4693.14Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTW+GGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY A+VSDQ+TA+TAP+HAQQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

XP_022998764.1 developmental protein SEPALLATA 1-like [Cucurbita maxima]2.9e-4390.2Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNR+LTLKLEEISSRNNIRLTWE  DQ MSY PQNAQTQGFFQPLDCNPTLQIGY+A+VSDQITATTAP+HAQQVN FL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

XP_038877181.1 agamous-like MADS-box protein MADS2 isoform X2 [Benincasa hispida]3.1e-4591.18Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY ++VSDQIT+TTAP+H QQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

TrEMBL top hitse value%identityAlignment
A0A0A0KVX3 K-box domain-containing protein9.8e-4589.22Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNIRLTW+GGDQSMSYGPQNAQTQGFFQPL+CNPTLQIGY ++VSDQIT+TT P+HAQQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

A0A6J1DN93 developmental protein SEPALLATA 11.8e-4693.14Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTW+GGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY A+VSDQ+TA+TAP+HAQQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

A0A6J1KF82 developmental protein SEPALLATA 1-like1.4e-4390.2Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNR+LTLKLEEISSRNNIRLTWE  DQ MSY PQNAQTQGFFQPLDCNPTLQIGY+A+VSDQITATTAP+HAQQVN FL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

Q9ARF0 MADS2 protein (Fragment)9.8e-4589.22Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNIRLTW+GGDQSMSYGPQNAQTQGFFQPL+CNPTLQIGY ++VSDQIT+TT P+HAQQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

Q9SEG4 CAGL29.8e-4589.22Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQYMLDQLSDLQNKEQMLIETNRAL +KLEEISSRNNIRLTW+GGDQSMSYGPQNAQTQGFFQPL+CNPTLQIGY ++VSDQIT+TT P+HAQQVNGFL
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

SwissProt top hitse value%identityAlignment
P29382 Developmental protein SEPALLATA 15.8e-2657.41Show/hide
Query:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY-NASVSDQITATTAPSHAQ
        ++TQYMLDQLSDLQNKEQML+ETNRAL +KL+++    +  +     WEGG+Q+++Y    AQ+QG +QPL+CNPTLQ+GY N   S+QITATT  + AQ
Subjt:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY-NASVSDQITATTAPSHAQ

Query:  QVNGFLPG
        Q NG++PG
Subjt:  QVNGFLPG

P29384 Developmental protein SEPALLATA 22.5e-2150Show/hide
Query:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISS--RNNIRLTWEGGD-QSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQV
        ++TQYMLDQLSDLQ KE +L++ NRAL++KLE++     ++I   WEGGD Q+++YG   A +QG +Q L+C+PTLQIGY+  V  +  A T    +QQ 
Subjt:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISS--RNNIRLTWEGGD-QSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQV

Query:  NGFLPG
        NG++PG
Subjt:  NGFLPG

Q38694 Agamous-like MADS-box protein AGL9 homolog5.1e-1442.72Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQG--FFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNG
        +TQ+MLDQL+DLQ +EQML E N+ L  + EE S  N  ++       ++ YG Q AQ  G  F+ PL+C PTLQIGY++ +      T A + A  VN 
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQG--FFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNG

Query:  FLP
        ++P
Subjt:  FLP

Q8LLR0 Agamous-like MADS-box protein MADS46.0e-1549.04Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQ--GFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNG
        +TQYMLDQL+DLQ KE ML E N+ L  +L E +  N  +L W    Q + YG Q AQ Q  GFF PL+C PTLQIGY     D IT   A      VN 
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQ--GFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNG

Query:  FLPG
        ++PG
Subjt:  FLPG

Q8LLR2 Agamous-like MADS-box protein MADS21.7e-3367.65Show/hide
Query:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL
        +TQ+MLDQLSDLQNKEQ+L+E+N+ALT KL+EIS +N+++L+WE G+QSM YG Q AQ+QGFFQPL+CNPTLQIGYN + S Q+   +APS+AQ VNGF+
Subjt:  QTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFL

Query:  PG
        PG
Subjt:  PG

Arabidopsis top hitse value%identityAlignment
AT1G24260.1 K-box region and MADS-box transcription factor family protein9.2e-1141.51Show/hide
Query:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYG----PQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQ
        L+TQ+MLDQL+DLQ+KE+ML ETN+ L L+L +   +  ++L     ++   YG     Q   +Q FFQPL+C P LQIGY      Q      PS    
Subjt:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYG----PQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQ

Query:  VNGFLP
        + G+LP
Subjt:  VNGFLP

AT1G24260.2 K-box region and MADS-box transcription factor family protein9.2e-1141.51Show/hide
Query:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYG----PQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQ
        L+TQ+MLDQL+DLQ+KE+ML ETN+ L L+L +   +  ++L     ++   YG     Q   +Q FFQPL+C P LQIGY      Q      PS    
Subjt:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYG----PQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQ

Query:  VNGFLP
        + G+LP
Subjt:  VNGFLP

AT3G02310.1 K-box region and MADS-box transcription factor family protein1.8e-2250Show/hide
Query:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISS--RNNIRLTWEGGD-QSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQV
        ++TQYMLDQLSDLQ KE +L++ NRAL++KLE++     ++I   WEGGD Q+++YG   A +QG +Q L+C+PTLQIGY+  V  +  A T    +QQ 
Subjt:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISS--RNNIRLTWEGGD-QSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQV

Query:  NGFLPG
        NG++PG
Subjt:  NGFLPG

AT5G15800.1 K-box region and MADS-box transcription factor family protein4.1e-2757.41Show/hide
Query:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY-NASVSDQITATTAPSHAQ
        ++TQYMLDQLSDLQNKEQML+ETNRAL +KL+++    +  +     WEGG+Q+++Y    AQ+QG +QPL+CNPTLQ+GY N   S+QITATT  + AQ
Subjt:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY-NASVSDQITATTAPSHAQ

Query:  QVNGFLPG
        Q NG++PG
Subjt:  QVNGFLPG

AT5G15800.2 K-box region and MADS-box transcription factor family protein8.6e-2551.26Show/hide
Query:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY------------NASVSDQ
        ++TQYMLDQLSDLQNKEQML+ETNRAL +KL+++    +  +     WEGG+Q+++Y    AQ+QG +QPL+CNPTLQ+G             N   S+Q
Subjt:  LQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRL----TWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGY------------NASVSDQ

Query:  ITATTAPSHAQQVNGFLPG
        ITATT  + AQQ NG++PG
Subjt:  ITATTAPSHAQQVNGFLPG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGAACTGGAAATTGCAGACTCAGTACATGCTGGACCAGCTATCTGACCTTCAGAACAAGGAACAAATGCTGATTGAAACCAACAGAGCTCTGACACTAAAGCTGGA
AGAAATAAGTTCAAGAAACAACATAAGGCTAACATGGGAAGGTGGAGACCAAAGCATGTCATATGGTCCACAAAATGCCCAAACTCAAGGCTTCTTTCAGCCACTGGATT
GCAATCCCACTTTGCAAATTGGGTACAATGCTTCAGTATCAGACCAAATTACAGCCACCACTGCCCCAAGTCATGCCCAACAAGTCAATGGCTTTCTCCCTGGAGCTAAC
GAGGACAACTGGGTAGAAATAGGGCTGGGAGATGGACCCCAGAGGCGAAACCGACAAATAGGACGAGACAAGATCGAAGGGGTCGGGCTTCGACCCAAGGCAGAGAGGCC
GAGGCCGACCCTCGGCCCGCTTGCGCGGGTCGAGCCTGTCCAGCTCGGTTTGGTCCCCACCGCCTCTGCTGTCCCGGTTCCGTCTGGTTTGTCCCGAAACGCCTCCGAAT
TCCTAAAAACCCTAGGAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGAACTGGAAATTGCAGACTCAGTACATGCTGGACCAGCTATCTGACCTTCAGAACAAGGAACAAATGCTGATTGAAACCAACAGAGCTCTGACACTAAAGCTGGA
AGAAATAAGTTCAAGAAACAACATAAGGCTAACATGGGAAGGTGGAGACCAAAGCATGTCATATGGTCCACAAAATGCCCAAACTCAAGGCTTCTTTCAGCCACTGGATT
GCAATCCCACTTTGCAAATTGGGTACAATGCTTCAGTATCAGACCAAATTACAGCCACCACTGCCCCAAGTCATGCCCAACAAGTCAATGGCTTTCTCCCTGGAGCTAAC
GAGGACAACTGGGTAGAAATAGGGCTGGGAGATGGACCCCAGAGGCGAAACCGACAAATAGGACGAGACAAGATCGAAGGGGTCGGGCTTCGACCCAAGGCAGAGAGGCC
GAGGCCGACCCTCGGCCCGCTTGCGCGGGTCGAGCCTGTCCAGCTCGGTTTGGTCCCCACCGCCTCTGCTGTCCCGGTTCCGTCTGGTTTGTCCCGAAACGCCTCCGAAT
TCCTAAAAACCCTAGGAGCATAA
Protein sequenceShow/hide protein sequence
MWNWKLQTQYMLDQLSDLQNKEQMLIETNRALTLKLEEISSRNNIRLTWEGGDQSMSYGPQNAQTQGFFQPLDCNPTLQIGYNASVSDQITATTAPSHAQQVNGFLPGAN
EDNWVEIGLGDGPQRRNRQIGRDKIEGVGLRPKAERPRPTLGPLARVEPVQLGLVPTASAVPVPSGLSRNASEFLKTLGA