; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000487 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000487
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioninactive poly [ADP-ribose] polymerase RCD1-like
Genome locationchr4:8567074..8573408
RNA-Seq ExpressionLag0000487
SyntenyLag0000487
Gene Ontology termsGO:0003950 - NAD+ ADP-ribosyltransferase activity (molecular function)
InterPro domainsIPR022003 - RST domain
IPR044964 - Inactive poly [ADP-ribose] polymerase RCD1/SRO1-5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571640.1 Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3990.62Show/hide
Query:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Subjt:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

KAG7011369.1 Inactive poly [ADP-ribose] polymerase RCD1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-3989.58Show/hide
Query:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y LFREKKI+RDEFIRRLRSIVGDPLLRS L SLQCKL
Subjt:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

XP_022963963.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita moschata]1.9e-3990.62Show/hide
Query:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Subjt:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

XP_022967219.1 inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Cucurbita maxima]9.4e-3989.58Show/hide
Query:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMK V G Y LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Subjt:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

XP_023553913.1 inactive poly [ADP-ribose] polymerase RCD1-like [Cucurbita pepo subsp. pepo]1.9e-3990.62Show/hide
Query:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Subjt:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

TrEMBL top hitse value%identityAlignment
A0A6J1E0N0 inactive poly [ADP-ribose] polymerase RCD1-like isoform X23.3e-3790.43Show/hide
Query:  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK
        EDCVSSPAP KRCT K  DHGSSSLKTPKSPWM FS LFNAISKEVSLNDMKLVNG YGLFREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK
Subjt:  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCK

A0A6J1E4V0 inactive poly [ADP-ribose] polymerase RCD1-like isoform X11.5e-3781.13Show/hide
Query:  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKLGCMND
        EDCVSSPAP KRCT K  DHGSSSLKTPKSPWM FS LFNAISKEVSLNDMKLVNG YGLFREKKI+RDEFI RLRSIVGDPLLRSTLTSLQCK+   + 
Subjt:  EDCVSSPAPEKRCTEK-PDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKLGCMND

Query:  FNMAPP
        +    P
Subjt:  FNMAPP

A0A6J1HJF2 inactive poly [ADP-ribose] polymerase RCD1-like isoform X19.2e-4090.62Show/hide
Query:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMKLV G Y LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Subjt:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

A0A6J1HW58 inactive poly [ADP-ribose] polymerase RCD1-like isoform X14.6e-3989.58Show/hide
Query:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        +VEDCVSSP PEKRCTEK DHGSSSLKTPKSPWM FSMLFNAISKEVSLNDMK V G Y LFREKKI+RDEFIRRLRSIVGDPLLRS LTSLQCKL
Subjt:  TVEDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

A0A6J1K3U5 inactive poly [ADP-ribose] polymerase RCD1-like7.3e-3787.23Show/hide
Query:  EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        EDCVSSPAPEKRCTEK DHGSS LKTPKSPWM FSMLF+AISKEVSL++MKLV   YGLFREKKI+RDEFIRRLRSIVGDPLLRS LTSL CKL
Subjt:  EDCVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

SwissProt top hitse value%identityAlignment
O82289 Probable inactive poly [ADP-ribose] polymerase SRO11.1e-1042.59Show/hide
Query:  HFLVGPTVEDCVSSPAPEKRCTEKPDHG----SSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTL
        H   G T+E    SP+ E         G    SSS + P+SP M F +LF AIS +++  DM L+   Y   REKK++R EF + L  IVG D LL ST+
Subjt:  HFLVGPTVEDCVSSPAPEKRCTEKPDHG----SSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTL

Query:  TSLQCKLG
        T LQ  LG
Subjt:  TSLQCKLG

Q8RY59 Inactive poly [ADP-ribose] polymerase RCD16.8e-1661.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

Q9FJJ3 Probable inactive poly [ADP-ribose] polymerase SRO54.2e-0536.62Show/hide
Query:  CTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLL
        C + P + + S K  +SPWM F +L  A+SK +  + + ++   Y   + ++I R E I+R+RSI GD LL
Subjt:  CTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLL

Q9STU1 Probable inactive poly [ADP-ribose] polymerase SRO44.0e-0835.87Show/hide
Query:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++  Y   ++++I+R E I+RLRSI GD LL   + S+  K+
Subjt:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL

Q9ZUD9 Probable inactive poly [ADP-ribose] polymerase SRO21.4e-0538.6Show/hide
Query:  PKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLL
        P SPW+ F+ L + +S  +  + M L+   Y  FR++KI RD+ +R++R + GD LL
Subjt:  PKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLL

Arabidopsis top hitse value%identityAlignment
AT1G32230.1 WWE protein-protein interaction domain protein family4.9e-1761.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT1G32230.2 WWE protein-protein interaction domain protein family4.9e-1761.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT1G32230.3 WWE protein-protein interaction domain protein family4.9e-1761.43Show/hide
Query:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ
        SS   PKSPWM F  LF AIS +V+ NDM L+N DY   R+KK+ R EF+R+LR IVGD LLRST+T+LQ
Subjt:  SSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQ

AT2G35510.1 similar to RCD one 18.0e-1242.59Show/hide
Query:  HFLVGPTVEDCVSSPAPEKRCTEKPDHG----SSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTL
        H   G T+E    SP+ E         G    SSS + P+SP M F +LF AIS +++  DM L+   Y   REKK++R EF + L  IVG D LL ST+
Subjt:  HFLVGPTVEDCVSSPAPEKRCTEKPDHG----SSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVG-DPLLRSTL

Query:  TSLQCKLG
        T LQ  LG
Subjt:  TSLQCKLG

AT3G47720.1 similar to RCD one 42.9e-0935.87Show/hide
Query:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL
        C+ +P+  KR            K PKSPW+ F +L N+ISK ++ + ++L++  Y   ++++I+R E I+RLRSI GD LL   + S+  K+
Subjt:  CVSSPAPEKRCTEKPDHGSSSLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAATGTATTGCTGAGCGACTGGAGGGAACAAATTCTGTGCTGGAGCAAAGCGAGGAGCAAAACTACCATGTCACAGCTTGTTGCGTACGTCGCCACCGAAGCTCT
CGTCTCAAGTCGCCTACGTCGCCGCCAAATCTCGCCGCTGAAGCTCGCGTCTCCGCCCCTTTTCCCTCTCTCCCTTGAGCAAAAGCTTGTCGCCTCCCATCCACGTCGCT
CAGCCGCCGTCTTCGTCAATCACTTCCTCGTCGGCCCAACTGTGGAGGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGC
TCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTCAATGTTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTGATTATGGCTT
ATTTAGAGAAAAGAAGATCAATAGGGACGAATTCATTAGAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAAGCTTGGAT
GCATGAATGATTTCAACATGGCTCCCCCTTTTTTGTATGGAAATGTGAAGAACGTAGCGACAACGGGCCGGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACT
ATGTCACTAAACATCTTTTTCTGCGACATCGGGTCGGACGTTACTGAAAGTGATCTTCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAATGTATTGCTGAGCGACTGGAGGGAACAAATTCTGTGCTGGAGCAAAGCGAGGAGCAAAACTACCATGTCACAGCTTGTTGCGTACGTCGCCACCGAAGCTCT
CGTCTCAAGTCGCCTACGTCGCCGCCAAATCTCGCCGCTGAAGCTCGCGTCTCCGCCCCTTTTCCCTCTCTCCCTTGAGCAAAAGCTTGTCGCCTCCCATCCACGTCGCT
CAGCCGCCGTCTTCGTCAATCACTTCCTCGTCGGCCCAACTGTGGAGGATTGTGTGTCCTCGCCAGCTCCTGAAAAGAGATGCACAGAAAAGCCTGACCATGGATCTAGC
TCCCTGAAGACTCCAAAGTCCCCATGGATGCTCTTTTCAATGTTGTTTAATGCCATTTCAAAAGAAGTTTCTCTTAATGACATGAAATTGGTGAACGGTGATTATGGCTT
ATTTAGAGAAAAGAAGATCAATAGGGACGAATTCATTAGAAGGCTGAGGTCCATTGTTGGGGATCCGTTACTGAGGTCTACATTAACGAGTCTCCAGTGCAAGCTTGGAT
GCATGAATGATTTCAACATGGCTCCCCCTTTTTTGTATGGAAATGTGAAGAACGTAGCGACAACGGGCCGGATGTTGCTGAAAGTATATGGTTTTAGTGACGTGCTAACT
ATGTCACTAAACATCTTTTTCTGCGACATCGGGTCGGACGTTACTGAAAGTGATCTTCAGTGA
Protein sequenceShow/hide protein sequence
MQNVLLSDWREQILCWSKARSKTTMSQLVAYVATEALVSSRLRRRQISPLKLASPPLFPLSLEQKLVASHPRRSAAVFVNHFLVGPTVEDCVSSPAPEKRCTEKPDHGSS
SLKTPKSPWMLFSMLFNAISKEVSLNDMKLVNGDYGLFREKKINRDEFIRRLRSIVGDPLLRSTLTSLQCKLGCMNDFNMAPPFLYGNVKNVATTGRMLLKVYGFSDVLT
MSLNIFFCDIGSDVTESDLQ