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Lag0000491 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000491
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationchr4:8834309..8835016
RNA-Seq ExpressionLag0000491
SyntenyLag0000491
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-2837.23Show/hide
Query:  SNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPN
        + + L + LET A  GA W +S     T + + L P A VW+ F +SRLLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI ACA RK G LFFP+
Subjt:  SNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPN

Query:  LITALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWE
        LIT LC  A+     +EE L + G ID+ ++AR+  E                 S  R+N +++  +K +         QQ  MM  ++H+  QQ+ +W 
Subjt:  LITALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWE

Query:  YAHHRDSAMEKTFEYGFEELPQPFPQFPSSL
        Y+  RD+A++K  +  F      FP FP  +
Subjt:  YAHHRDSAMEKTFEYGFEELPQPFPQFPSSL

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.4e-2347.76Show/hide
Query:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT
        +L   LET AI GA W +S   + T L + L P A +W+ F +SRLLPTTH   VSKERVLL++S+L   SI++GR++ +EI ACA RK G LFFP+LI 
Subjt:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT

Query:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE
         +C  A+     +EE L + G ID+ ++AR+  E
Subjt:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.9e-2438.89Show/hide
Query:  LKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLITALCLKAQVQVDEDEEILIDKGIIDSTSIAR
        L P A VW+ F +SRLLPTTH   VSK+R+LL++S+L   SI+VGR++  EI ACA RK G LFFP+LIT LC  A+     +EE L   G ID+ ++AR
Subjt:  LKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLITALCLKAQVQVDEDEEILIDKGIIDSTSIAR

Query:  LHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQFPSSL
        +  E                 S  R+N +++  +K +         QQ  MM  ++H+  QQ+ +W Y+  RD+A++K  +  F      FP FP  L
Subjt:  LHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQFPSSL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.2e-2240.66Show/hide
Query:  APSNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFF
        A +  +L + LET AI GA W +S     T L + L P A VW+ F +SRLLPTTH   VSKERVLL++S+L   SI+VG+++ +EI A A RK G LFF
Subjt:  APSNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFF

Query:  PNLITALCLKAQVQVDEDEEILIDKGIIDSTSIARL---------HGESKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQ
        P+LIT +C  A+     +EE L + G ID+ ++AR+         H  S  R          E L Q + + +R+     QQ
Subjt:  PNLITALCLKAQVQVDEDEEILIDKGIIDSTSIARL---------HGESKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQ

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]7.3e-2838.01Show/hide
Query:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT
        +L + LET A  GA W +S     T + + L P A VW+ F +SRLLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI ACA +K G LFFP+LIT
Subjt:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT

Query:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQKAYWEYAHHRDSAME
         LC  A   V+E++  L + G ID+ ++AR+  E                 S  R+N +++  +K +  +QR  + + EH+  QQ+ +W Y+  RD+A++
Subjt:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQKAYWEYAHHRDSAME

Query:  KTFEYGFEELPQPFPQFPSSL
        K  +  F      FP FP  +
Subjt:  KTFEYGFEELPQPFPQFPSSL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)5.5e-2937.23Show/hide
Query:  SNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPN
        + + L + LET A  GA W +S     T + + L P A VW+ F +SRLLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI ACA RK G LFFP+
Subjt:  SNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPN

Query:  LITALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWE
        LIT LC  A+     +EE L + G ID+ ++AR+  E                 S  R+N +++  +K +         QQ  MM  ++H+  QQ+ +W 
Subjt:  LITALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWE

Query:  YAHHRDSAMEKTFEYGFEELPQPFPQFPSSL
        Y+  RD+A++K  +  F      FP FP  +
Subjt:  YAHHRDSAMEKTFEYGFEELPQPFPQFPSSL

A0A2P5BNT0 Uncharacterized protein (Fragment)1.2e-2347.76Show/hide
Query:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT
        +L   LET AI GA W +S   + T L + L P A +W+ F +SRLLPTTH   VSKERVLL++S+L   SI++GR++ +EI ACA RK G LFFP+LI 
Subjt:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT

Query:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE
         +C  A+     +EE L + G ID+ ++AR+  E
Subjt:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE

A0A2P5CEY2 Uncharacterized protein2.4e-2438.89Show/hide
Query:  LKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLITALCLKAQVQVDEDEEILIDKGIIDSTSIAR
        L P A VW+ F +SRLLPTTH   VSK+R+LL++S+L   SI+VGR++  EI ACA RK G LFFP+LIT LC  A+     +EE L   G ID+ ++AR
Subjt:  LKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLITALCLKAQVQVDEDEEILIDKGIIDSTSIAR

Query:  LHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQFPSSL
        +  E                 S  R+N +++  +K +         QQ  MM  ++H+  QQ+ +W Y+  RD+A++K  +  F      FP FP  L
Subjt:  LHGE-----------------SKGRSNTNMVCGVKEILW-------QQRRMMRRMEHSANQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQFPSSL

A0A2P5CPE8 Uncharacterized protein5.9e-2340.66Show/hide
Query:  APSNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFF
        A +  +L + LET AI GA W +S     T L + L P A VW+ F +SRLLPTTH   VSKERVLL++S+L   SI+VG+++ +EI A A RK G LFF
Subjt:  APSNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFF

Query:  PNLITALCLKAQVQVDEDEEILIDKGIIDSTSIARL---------HGESKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQ
        P+LIT +C  A+     +EE L + G ID+ ++AR+         H  S  R          E L Q + + +R+     QQ
Subjt:  PNLITALCLKAQVQVDEDEEILIDKGIIDSTSIARL---------HGESKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQ

A0A2P5DXM3 Uncharacterized protein3.6e-2838.01Show/hide
Query:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT
        +L + LET A  GA W +S     T + + L P A VW+ F +SRLLPTTH   VSK+R+LL+ S+L   SI+VGR++  EI ACA +K G LFFP+LIT
Subjt:  QLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLIT

Query:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQKAYWEYAHHRDSAME
         LC  A   V+E++  L + G ID+ ++AR+  E                 S  R+N +++  +K +  +QR  + + EH+  QQ+ +W Y+  RD+A++
Subjt:  ALCLKAQVQVDEDEEILIDKGIIDSTSIARLHGE-----------------SKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQKAYWEYAHHRDSAME

Query:  KTFEYGFEELPQPFPQFPSSL
        K  +  F      FP FP  +
Subjt:  KTFEYGFEELPQPFPQFPSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTGCTCCATCTAATGAGCAACTCCAATCATCTCTAGAAACATGTGCAATTGAAGGAGCAAGCTGGAAAATGTCTAGGAACTCCATCCGAACACTGTTGGCAAC
TTACCTAAAGCCCGAGGCAAATGTATGGCATACCTTTGCAAGGAGTAGGTTGCTCCCTACCACTCATGACACCTTTGTGTCCAAAGAAAGAGTTCTCTTAGTTTTTTCCA
TCTTGAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGGAGATTTTTGCGTGTGCAAAAAGGAAGGTAGGAAGGCTATTTTTCCCAAATCTTATTACAGCATTG
TGTTTGAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAGATCTTAATAGACAAGGGTATTATTGATTCAACATCTATAGCAAGGTTGCATGGGGAGAGTAAAGGGAGGTC
CAACACAAATATGGTTTGTGGAGTTAAGGAGATTTTGTGGCAGCAGAGGAGAATGATGAGGCGAATGGAGCATAGTGCAAATCAGCAAAAGGCCTACTGGGAATACGCTC
ATCACAGAGACTCTGCCATGGAAAAGACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCCTCAAGTTTATTTAATCCATGGTGCCCTTCCCCA
TCTCGAAGTGGGAATGATGATGATGCTGATGCTGGTCAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATTGCTCCATCTAATGAGCAACTCCAATCATCTCTAGAAACATGTGCAATTGAAGGAGCAAGCTGGAAAATGTCTAGGAACTCCATCCGAACACTGTTGGCAAC
TTACCTAAAGCCCGAGGCAAATGTATGGCATACCTTTGCAAGGAGTAGGTTGCTCCCTACCACTCATGACACCTTTGTGTCCAAAGAAAGAGTTCTCTTAGTTTTTTCCA
TCTTGAAGATTCTGAGCATTGATGTGGGGAGGCTTTTGGCAAAGGAGATTTTTGCGTGTGCAAAAAGGAAGGTAGGAAGGCTATTTTTCCCAAATCTTATTACAGCATTG
TGTTTGAAGGCTCAAGTTCAAGTGGATGAGGATGAAGAGATCTTAATAGACAAGGGTATTATTGATTCAACATCTATAGCAAGGTTGCATGGGGAGAGTAAAGGGAGGTC
CAACACAAATATGGTTTGTGGAGTTAAGGAGATTTTGTGGCAGCAGAGGAGAATGATGAGGCGAATGGAGCATAGTGCAAATCAGCAAAAGGCCTACTGGGAATACGCTC
ATCACAGAGACTCTGCCATGGAAAAGACATTTGAATATGGCTTTGAGGAACTTCCTCAGCCATTCCCTCAATTCCCCTCAAGTTTATTTAATCCATGGTGCCCTTCCCCA
TCTCGAAGTGGGAATGATGATGATGCTGATGCTGGTCAAGAAGATTGA
Protein sequenceShow/hide protein sequence
MEIAPSNEQLQSSLETCAIEGASWKMSRNSIRTLLATYLKPEANVWHTFARSRLLPTTHDTFVSKERVLLVFSILKILSIDVGRLLAKEIFACAKRKVGRLFFPNLITAL
CLKAQVQVDEDEEILIDKGIIDSTSIARLHGESKGRSNTNMVCGVKEILWQQRRMMRRMEHSANQQKAYWEYAHHRDSAMEKTFEYGFEELPQPFPQFPSSLFNPWCPSP
SRSGNDDDADAGQED