CuGenDBv2

Gene ID	Lag0000505
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	CCHC-type domain-containing protein
Genome location	chr4:9160250..9160973
RNA-Seq Expression	Lag0000505
Synteny	Lag0000505
Gene Ontology terms	GO:0009987 - cellular process (biological process) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR006564 - Zinc finger, PMZ-type IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]

1.3e-55

52.63

Show/hide

Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        +TTNISE +N+ LK+ R+LP+I LLE+ RSL Q+WFYE RT  SFQRT LS  AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS RNL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L P  KR  GRPKKKR  S ++ + +++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        N +S +  I
Subjt:  NRKSYRNSI

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]

1.7e-55

52.63

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Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        MTTNISE +N+ LK+ R+LPVI LLE+ RSL ++WFYERRT  SFQRT LS +AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS  NL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L    KR  GRPKKKR  S ++ + T++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        + +S +  I
Subjt:  NRKSYRNSI

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]

9.8e-56

52.63

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Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        +TTNISE + + LK+ R+LPVI LLE+ RSL Q+WFYERRT  SFQ T LS +AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS RNL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L P  KR  GRPKKKR  S ++ + +++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        N +S +  I
Subjt:  NRKSYRNSI

XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]

1.3e-55

52.63

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Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        +TTNISE +N+ LK+ R+LP+I LLE+ RSL Q+WFYE RT  SFQRT LS  AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS RNL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L P  KR  GRPKKKR  S ++ + +++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        N +S +  I
Subjt:  NRKSYRNSI

XP_008444294.1 PREDICTED: uncharacterized protein LOC103487663 [Cucumis melo]

1.7e-55

52.63

Show/hide

Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        MTTNISE +N+ LK+ R+LPVI LLE+ RSL ++WFYERRT  SFQRT LS +AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS  NL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L    KR  GRPKKKR  S ++ + T++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        + +S +  I
Subjt:  NRKSYRNSI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B5C9 uncharacterized protein LOC103486212

6.2e-56

52.63

Show/hide

Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        +TTNISE +N+ LK+ R+LP+I LLE+ RSL Q+WFYE RT  SFQRT LS  AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS RNL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L P  KR  GRPKKKR  S ++ + +++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        N +S +  I
Subjt:  NRKSYRNSI

A0A1S3BA43 uncharacterized protein LOC103487663

8.1e-56

52.63

Show/hide

Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        MTTNISE +N+ LK+ R+LPVI LLE+ RSL ++WFYERRT  SFQRT LS +AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS  NL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L    KR  GRPKKKR  S ++ + T++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        + +S +  I
Subjt:  NRKSYRNSI

A0A5A7T2S1 Uncharacterized protein

6.2e-56

52.63

Show/hide

Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        +TTNISE +N+ LK+ R+LP+I LLE+ RSL Q+WFYE RT  SFQRT LS  AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS RNL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L P  KR  GRPKKKR  S ++ + +++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        N +S +  I
Subjt:  NRKSYRNSI

A0A5A7VAU3 MuDRA-like transposase

8.1e-56

52.63

Show/hide

Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        MTTNISE +N+ LK+ R+LPVI LLE+ RSL ++WFYERRT  SFQRT LS +AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS  NL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L    KR  GRPKKKR  S ++ + T++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        + +S +  I
Subjt:  NRKSYRNSI

A0A5D3CDB8 Uncharacterized protein

4.7e-56

52.63

Show/hide

Query:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR
        +TTNISE + + LK+ R+LPVI LLE+ RSL Q+WFYERRT  SFQ T LS +AE+++R SL +SR+ +IY ++Q++FEVH   +Q+ VNIL RTC+CR+
Subjt:  MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRR

Query:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH
        WDLDLI C+HACI LS RNL    Y+  FY +SNL  LY K  RPIG V    N    G+D +L P  KR  GRPKKKR  S ++ + +++C  CG+ GH
Subjt:  WDLDLISCAHACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGH

Query:  NRKSYRNSI
        N +S +  I
Subjt:  NRKSYRNSI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGACCACCAACATATCTGAGTGCATCAATGCAATATTGAAGGATGCACGCAAACTTCCTGTTATTCATCTTCTTGAAGCTGCACGCAGTTTGACGCAAAGATGGTTTTA
TGAACGTCGTACTGTTTGTAGTTTTCAGCGCACAGATCTTTCTCCATGGGCAGAAAATTTACTTCGGTCCTCATTAAACCGGAGCCGGACTAAGGATATTTACAATATAA
ATCAATATCAATTTGAAGTTCATGATTGGACAAAGCAGTACAAGGTTAACATCTTGGCTCGAACTTGCACGTGTAGACGGTGGGATCTGGACTTAATATCGTGTGCTCAC
GCATGCATTACGCTATCTCGGAGGAACTTGGAATTTCAAGCATATTCACATGATTTTTATCAACTTTCAAACTTGGCTCAATTATATAGCAAAGACGTACGTCCTATTGG
CGATGTTGCACACTTTTCAAACAACATAACTGCTGGTGACGACTCTGTGCTATCGCCAAACACGAAACGATCAGTTGGTAGACCAAAAAAAAAAAGGATCCCGTCATGCA
TAGATGGGAGGCCAACCATAAAGTGTGGATGTTGCGGACAGGTTGGCCACAATCGCAAGTCCTACCGGAATTCGATATCTAATTGA

mRNA sequence

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Protein sequence

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MTTNISECINAILKDARKLPVIHLLEAARSLTQRWFYERRTVCSFQRTDLSPWAENLLRSSLNRSRTKDIYNINQYQFEVHDWTKQYKVNILARTCTCRRWDLDLISCAH
ACITLSRRNLEFQAYSHDFYQLSNLAQLYSKDVRPIGDVAHFSNNITAGDDSVLSPNTKRSVGRPKKKRIPSCIDGRPTIKCGCCGQVGHNRKSYRNSISN

Lag0000505 (gene) of Sponge gourd (AG-4) v1 genome