; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000514 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000514
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:9376599..9378087
RNA-Seq ExpressionLag0000514
SyntenyLag0000514
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006485824.1 uncharacterized protein LOC102613298 [Citrus sinensis]1.9e-3032.86Show/hide
Query:  DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIES---------------------AGPWAFDR
        ++L+ +  +  L  EE  M+  G    V     +  C++GK+  ++ V  E  R+ M+ AWR    T++ES                      GPW FDR
Subjt:  DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIES---------------------AGPWAFDR

Query:  SLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLYE
        SL+V+ EP   G V   +F    FWVQIHN+P+    +E+ +++G +IG V+EV     GE  G  +R+R+++ + RPL + + L+ E+G +    + YE
Subjt:  SLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLYE

Query:  RLPDFCYDCGCWG
        +LPDFC+ CG  G
Subjt:  RLPDFCYDCGCWG

XP_015388532.1 uncharacterized protein LOC107178176 [Citrus sinensis]4.1e-3032.86Show/hide
Query:  DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIES---------------------AGPWAFDR
        ++L+ +  +  L  EE  M+  G    V     +  C++GK+  ++ V  E  R+ M+ AWR    T++ES                      GPW FDR
Subjt:  DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIES---------------------AGPWAFDR

Query:  SLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLYE
        SL+V+ EP   G V   +F    FWVQIHN+P+    +E+ +++G +IG V+EV     GE  G  +RIR+++ +  PL + + L+ E+G +    + YE
Subjt:  SLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLYE

Query:  RLPDFCYDCGCWG
        +LPDFC+ CG  G
Subjt:  RLPDFCYDCGCWG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.4e-4842.18Show/hide
Query:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIE---------------------SAGPWAFD
        MD++   W  ++ T +E E V    G P+L+  ++++CV+ K+ +SKR++ EA RSVM++ WRVH +TR E                     S+GPW F+
Subjt:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIE---------------------SAGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY
        +SL+VL  P +    LD+ FN CAFW+QIHN+P    + EMA  LG K+G VEE+ G     W GP +R+RV + + +PLRRGI+L++ +GK+  C + Y
Subjt:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY

Query:  ERLPDFCYDCG
        E+LPDFCY+CG
Subjt:  ERLPDFCYDCG

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]2.3e-3335.32Show/hide
Query:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD
        MD++   W ++ LT+E+ E +      P+++  +++   +GK+ +SKR++VEAFRSVM++ W+VH +T IE+A                     GPW+F+
Subjt:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY
         SL+VL  P +     D+ FN  A W+QIH +P +   ++MA+ LG +IG VEE+      EWTGP +R+RV + + +P +RG++++  + KE  C + Y
Subjt:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY

Query:  E
        E
Subjt:  E

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]7.0e-4640.19Show/hide
Query:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD
        MDD+   W ++ L +EE + +      P+L++ +I++C +GK+  SKR+ VEAF SVM+  W++H +TRIE+A                     GPW FD
Subjt:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY
        +SL++L    +A   LD++ + CAFWVQIH +     T++MA+ LG ++G VEEV G+   +W  P L +RV + + +PLRRG++++  +GK+  C + Y
Subjt:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY

Query:  ERLPDFCYDCGCWG
        ERLPDFCY CGC G
Subjt:  ERLPDFCYDCGCWG

TrEMBL top hitse value%identityAlignment
A0A1S8AC25 CCHC-type domain-containing protein (Fragment)1.1e-2833.49Show/hide
Query:  DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIES---------------------AGPWAFDR
        ++L+ R  + RL++EE   V       +     +  C++GKV  ++ V++E  +  M+  WR     +IE                       GPW FDR
Subjt:  DDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIES---------------------AGPWAFDR

Query:  SLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEE--GKEFQCSVL
        +L+ L EP   G +   +F+  +FWVQIH+VP+   +++MA +LG  IG VEEV     GE  G  LR+R+ + + +PL++ I L+ EE    +    V+
Subjt:  SLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEE--GKEFQCSVL

Query:  YERLPDFCYDCG
        YERLPDFC+ CG
Subjt:  YERLPDFCYDCG

A0A5C7I1Z5 Uncharacterized protein6.4e-2936Show/hide
Query:  LTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIE---------------------SAGPWAFDRSLVVLKEPRSA
        + +E++E+ +  EG     +  +   ++GKV SS+RVN EAF+S++   W   G   IE                     + GPW FDRSL+VL++P   
Subjt:  LTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIE---------------------SAGPWAFDRSLVVLKEPRSA

Query:  GSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQ-DEEGKEFQCSVLYERLPDFCYDCG
        G++  + F+   FWVQIH++P+    R MAR L ++IG V ++       W G  L++RVL+ + RPL+R +RL+ D  G      + YERLP+FCY CG
Subjt:  GSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQ-DEEGKEFQCSVLYERLPDFCYDCG

A0A6J1D765 uncharacterized protein LOC1110179021.6e-4842.18Show/hide
Query:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIE---------------------SAGPWAFD
        MD++   W  ++ T +E E V    G P+L+  ++++CV+ K+ +SKR++ EA RSVM++ WRVH +TR E                     S+GPW F+
Subjt:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIE---------------------SAGPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY
        +SL+VL  P +    LD+ FN CAFW+QIHN+P    + EMA  LG K+G VEE+ G     W GP +R+RV + + +PLRRGI+L++ +GK+  C + Y
Subjt:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY

Query:  ERLPDFCYDCG
        E+LPDFCY+CG
Subjt:  ERLPDFCYDCG

A0A6J1DP89 uncharacterized protein LOC1110229321.1e-3335.32Show/hide
Query:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD
        MD++   W ++ LT+E+ E +      P+++  +++   +GK+ +SKR++VEAFRSVM++ W+VH +T IE+A                     GPW+F+
Subjt:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY
         SL+VL  P +     D+ FN  A W+QIH +P +   ++MA+ LG +IG VEE+      EWTGP +R+RV + + +P +RG++++  + KE  C + Y
Subjt:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY

Query:  E
        E
Subjt:  E

A0A6J1DVS4 uncharacterized protein LOC1110235553.4e-4640.19Show/hide
Query:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD
        MDD+   W ++ L +EE + +      P+L++ +I++C +GK+  SKR+ VEAF SVM+  W++H +TRIE+A                     GPW FD
Subjt:  MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESA---------------------GPWAFD

Query:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY
        +SL++L    +A   LD++ + CAFWVQIH +     T++MA+ LG ++G VEEV G+   +W  P L +RV + + +PLRRG++++  +GK+  C + Y
Subjt:  RSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLY

Query:  ERLPDFCYDCGCWG
        ERLPDFCY CGC G
Subjt:  ERLPDFCYDCGCWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding1.1e-0432.14Show/hide
Query:  GPWAFDRSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIG
        GPW+F+  + V++      S  D EF    FW+QI  +P+R+ T  +   +G+++G
Subjt:  GPWAFDRSLVVLKEPRSAGSVLDVEFNDCAFWVQIHNVPMRWQTREMARQLGDKIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACTTAGTTAGTCGATGGAACTCGTGGAGATTGACAGAGGAGGAGGCGGAGATGGTACGGCCAGGGGAGGGGACACCGGTTCTGTCAATGGGCTCGATAGAGAT
GTGTGTGATAGGTAAAGTCTTCTCCTCGAAGCGAGTGAATGTGGAGGCGTTTCGAAGTGTTATGAGGGCAGCATGGAGAGTGCATGGGGCGACGCGCATAGAATCTGCGG
GTCCATGGGCTTTTGACCGGTCTCTGGTGGTTCTGAAAGAGCCGAGGTCTGCAGGATCGGTTTTGGATGTGGAGTTTAATGATTGCGCCTTTTGGGTGCAGATTCATAAT
GTCCCTATGCGTTGGCAGACGAGGGAGATGGCTCGACAGTTGGGCGATAAGATCGGAACCGTGGAGGAAGTTGGTGGATTGCAGGGTGGTGAGTGGACAGGGCCGATTCT
TCGAATAAGGGTTCTTTTGAGGATGGATCGTCCTCTCAGGAGGGGGATCCGGTTGCAGGATGAGGAGGGCAAGGAGTTTCAATGTTCGGTCTTGTATGAGCGACTACCAG
ATTTTTGTTACGACTGTGGCTGTTGGGGCACTCGAGAAGGGAGTGTGGTGTGGTTAGGGAGGGTGCTTTGGAGCAGTGATCCATGTTCTGTTCCTGAGAATGCGGGGAAG
GAGATTGCTAATGCTTCTGGGGAGGGCGTGGAAGTCCAGGTTAGTGAGCAGGGGGACCAGGGGAAGGAGAGTAGTGGAGAGGGGGTCAGCGTGGTTGTGGTAACAAGGGG
GGAGGGGTTGGCTGATAAGGGAATGGGGAAGCAGAATGTGGGGTGTGTTACGGAGGAAAGTGGGGTAAGGAGGAGGGTTAGAAGTGATGGGGAAAGGGGGAGGTGGTCGG
AACTGGAAGAGGAGGGCGAGGATGTCTTGTCTGATGTTACCAATCGAGATGTCTCTCTGGTGTTTGTTAATGGTCCCAGCCCCGCCGGAGATTATGAGTTTGATTTTCTG
GAATGTTCGGGGGTCGGGGTCACCTCGGACATTCAGGCGCCTGACCAAGCTAGTTTAGGAGAAACGACCTCAGGTGCTCTTCTTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACTTAGTTAGTCGATGGAACTCGTGGAGATTGACAGAGGAGGAGGCGGAGATGGTACGGCCAGGGGAGGGGACACCGGTTCTGTCAATGGGCTCGATAGAGAT
GTGTGTGATAGGTAAAGTCTTCTCCTCGAAGCGAGTGAATGTGGAGGCGTTTCGAAGTGTTATGAGGGCAGCATGGAGAGTGCATGGGGCGACGCGCATAGAATCTGCGG
GTCCATGGGCTTTTGACCGGTCTCTGGTGGTTCTGAAAGAGCCGAGGTCTGCAGGATCGGTTTTGGATGTGGAGTTTAATGATTGCGCCTTTTGGGTGCAGATTCATAAT
GTCCCTATGCGTTGGCAGACGAGGGAGATGGCTCGACAGTTGGGCGATAAGATCGGAACCGTGGAGGAAGTTGGTGGATTGCAGGGTGGTGAGTGGACAGGGCCGATTCT
TCGAATAAGGGTTCTTTTGAGGATGGATCGTCCTCTCAGGAGGGGGATCCGGTTGCAGGATGAGGAGGGCAAGGAGTTTCAATGTTCGGTCTTGTATGAGCGACTACCAG
ATTTTTGTTACGACTGTGGCTGTTGGGGCACTCGAGAAGGGAGTGTGGTGTGGTTAGGGAGGGTGCTTTGGAGCAGTGATCCATGTTCTGTTCCTGAGAATGCGGGGAAG
GAGATTGCTAATGCTTCTGGGGAGGGCGTGGAAGTCCAGGTTAGTGAGCAGGGGGACCAGGGGAAGGAGAGTAGTGGAGAGGGGGTCAGCGTGGTTGTGGTAACAAGGGG
GGAGGGGTTGGCTGATAAGGGAATGGGGAAGCAGAATGTGGGGTGTGTTACGGAGGAAAGTGGGGTAAGGAGGAGGGTTAGAAGTGATGGGGAAAGGGGGAGGTGGTCGG
AACTGGAAGAGGAGGGCGAGGATGTCTTGTCTGATGTTACCAATCGAGATGTCTCTCTGGTGTTTGTTAATGGTCCCAGCCCCGCCGGAGATTATGAGTTTGATTTTCTG
GAATGTTCGGGGGTCGGGGTCACCTCGGACATTCAGGCGCCTGACCAAGCTAGTTTAGGAGAAACGACCTCAGGTGCTCTTCTTATCTGA
Protein sequenceShow/hide protein sequence
MDDLVSRWNSWRLTEEEAEMVRPGEGTPVLSMGSIEMCVIGKVFSSKRVNVEAFRSVMRAAWRVHGATRIESAGPWAFDRSLVVLKEPRSAGSVLDVEFNDCAFWVQIHN
VPMRWQTREMARQLGDKIGTVEEVGGLQGGEWTGPILRIRVLLRMDRPLRRGIRLQDEEGKEFQCSVLYERLPDFCYDCGCWGTREGSVVWLGRVLWSSDPCSVPENAGK
EIANASGEGVEVQVSEQGDQGKESSGEGVSVVVVTRGEGLADKGMGKQNVGCVTEESGVRRRVRSDGERGRWSELEEEGEDVLSDVTNRDVSLVFVNGPSPAGDYEFDFL
ECSGVGVTSDIQAPDQASLGETTSGALLI