; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000523 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000523
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:9447119..9448393
RNA-Seq ExpressionLag0000523
SyntenyLag0000523
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50825.1 hypothetical protein EZV62_023349 [Acer yangbiense]6.1e-3237.91Show/hide
Query:  ACKILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCR
        A KI +NK+VN++ F+  IPRIW L   V IE    N +   F  + D+ RV +GGPWSFD  LLV +E  G   I E+ F    FW+  H +P +C   
Subjt:  ACKILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCR

Query:  KYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC
        +    LG  IG  + ++    G+ +G+ +RVR+ IN+N P++R   V +        + + YE+LP+ C+ CG IGHV+ +C
Subjt:  KYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]4.5e-3534.36Show/hide
Query:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY
        K + NK++N+E F   I  IW  +  V++E    N++  +F +  D+ R+ +GGPW FD  LLV  E +G+  + +L F+Y  FWI  H LP  C  R+ 
Subjt:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY

Query:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEENEEEKMVRNF-------
           LG  +G  + ++A E G   G+ +R+R+ I++ +P+KRG  V +G  +K+  + I YE+LP+FCY+CGKIGH++ +C    +E     +F       
Subjt:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEENEEEKMVRNF-------

Query:  GVELRETQGSKELNEEEEEPSEQQNSD
         V    ++G+ E     E   E  +SD
Subjt:  GVELRETQGSKELNEEEEEPSEQQNSD

TXG64850.1 hypothetical protein EZV62_011844 [Acer yangbiense]4.2e-3334.13Show/hide
Query:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY
        K+L +++V +E+F++ + +IW + G V IE    N++   F +  D+ RV +GGPWSFD  +++FDEPTG   I+ L F Y  FW+  H LP +C   + 
Subjt:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY

Query:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE
           LG+ IG     ++    + SG  +RVR+ I ++ P++R   V +   +K+  + + YE+L D+C+ CG++GH+++EC E+    +      R  GV 
Subjt:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE

Query:  LRETQGSK
        LR     K
Subjt:  LRETQGSK

TXG69172.1 hypothetical protein EZV62_004107 [Acer yangbiense]1.0e-3130.75Show/hide
Query:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY
        K+L+ K VN+E F+  I ++W   GRV IE    N+++  F +   +  +   GPW FD NL+V ++P G   I+ L+F     W+  H LP +C  R+ 
Subjt:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY

Query:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEENEEEKMVR----NFGVE
         +A+   IGT   + A E     G+ LRV+++INI++P+KR   + +  I+K   +P+TYE+LP+FCY CG+IGH + EC ++    + +      FG  
Subjt:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEENEEEKMVR----NFGVE

Query:  LRETQGSK-ELNEEEEEPSEQQNSDQPPGNIQAARS-LEIGRSYEKDDTDICTSKPKKLAVRCSQNDGVSEKSDNKMHKAG----ASGAEMGPITHDVKR
        +R   G +   N+++   +    S +   +   A S  E+G S         TS P KL  R  ++ GVS+  +  +H  G      G  +  I  D  +
Subjt:  LRETQGSK-ELNEEEEEPSEQQNSDQPPGNIQAARS-LEIGRSYEKDDTDICTSKPKKLAVRCSQNDGVSEKSDNKMHKAG----ASGAEMGPITHDVKR

Query:  LEIKKGEGSVSCSKEEGNKSNK
        + ++ G+GS    ++  N+  K
Subjt:  LEIKKGEGSVSCSKEEGNKSNK

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.2e-3337.13Show/hide
Query:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY
        K+LA +I++ ++    +   W +E ++++E   +NL+L  F  + D NRV K GPW FD  L+V  +P  +  I+EL F    FWIH   LP     +  
Subjt:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY

Query:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE
           LGN+IG F  V+ NE+G   G +LR+R+ I+I  P++RG  + I       WIPI YE+LPDFCY CG IGH   +C+       ++ +    +G  
Subjt:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE

Query:  LR
        LR
Subjt:  LR

TrEMBL top hitse value%identityAlignment
A0A5C7GZQ4 CCHC-type domain-containing protein5.0e-3237.36Show/hide
Query:  ACKILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCR
        A K+L+ K VN+E F+  +PRIW       IE    N++   F  + D+  V +GGPWSFD  LLV +EPTG   I E+ F    FWI  H +P +C   
Subjt:  ACKILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCR

Query:  KYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC
        +    LG+ IG  + ++    G+  G+ +RVR+ +++  P++R   V +    K   + + YE+LPD CY CG+IGHV+ +C
Subjt:  KYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC

A0A5C7H214 CCHC-type domain-containing protein3.0e-3237.91Show/hide
Query:  ACKILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCR
        A KI +NK+VN++ F+  IPRIW L   V IE    N +   F  + D+ RV +GGPWSFD  LLV +E  G   I E+ F    FW+  H +P +C   
Subjt:  ACKILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCR

Query:  KYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC
        +    LG  IG  + ++    G+ +G+ +RVR+ IN+N P++R   V +        + + YE+LP+ C+ CG IGHV+ +C
Subjt:  KYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC

A0A5C7H9Y2 CCHC-type domain-containing protein2.2e-3534.36Show/hide
Query:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY
        K + NK++N+E F   I  IW  +  V++E    N++  +F +  D+ R+ +GGPW FD  LLV  E +G+  + +L F+Y  FWI  H LP  C  R+ 
Subjt:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY

Query:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEENEEEKMVRNF-------
           LG  +G  + ++A E G   G+ +R+R+ I++ +P+KRG  V +G  +K+  + I YE+LP+FCY+CGKIGH++ +C    +E     +F       
Subjt:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEENEEEKMVRNF-------

Query:  GVELRETQGSKELNEEEEEPSEQQNSD
         V    ++G+ E     E   E  +SD
Subjt:  GVELRETQGSKELNEEEEEPSEQQNSD

A0A5C7I6E5 CCHC-type domain-containing protein2.0e-3334.13Show/hide
Query:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY
        K+L +++V +E+F++ + +IW + G V IE    N++   F +  D+ RV +GGPWSFD  +++FDEPTG   I+ L F Y  FW+  H LP +C   + 
Subjt:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY

Query:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE
           LG+ IG     ++    + SG  +RVR+ I ++ P++R   V +   +K+  + + YE+L D+C+ CG++GH+++EC E+    +      R  GV 
Subjt:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE

Query:  LRETQGSK
        LR     K
Subjt:  LRETQGSK

A0A6J1DU55 uncharacterized protein LOC1110231353.5e-3337.13Show/hide
Query:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY
        K+LA +I++ ++    +   W +E ++++E   +NL+L  F  + D NRV K GPW FD  L+V  +P  +  I+EL F    FWIH   LP     +  
Subjt:  KILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKY

Query:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE
           LGN+IG F  V+ NE+G   G +LR+R+ I+I  P++RG  + I       WIPI YE+LPDFCY CG IGH   +C+       ++ +    +G  
Subjt:  VEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEE----NEEEKMVRNFGVE

Query:  LR
        LR
Subjt:  LR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G42140.1 zinc ion binding;nucleic acid binding6.1e-0624.29Show/hide
Query:  FGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVK
        F S+     + + GPWSF+  + V    T     ++  FK   FWI   G+P      + + ++G  +G F  +E N                       
Subjt:  FGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKYVEALGNSIGTFETVEANEQGNISGETLRVRIKININDPVK

Query:  RGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC
         G +V +        +   YEKL +FC  CG + H   EC
Subjt:  RGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCTGCAAAATTCTTGCTAACAAGATAGTTAATCAGGAGATGTTCATGGAAAAAATACCGAGGATATGGGGGTTGGAAGGAAGAGTGTCTATTGAGAAGGCCAT
AAGGAACCTATACTTATGCAAATTCGGAAGTCAGAGGGACAAAAACAGAGTTACCAAAGGGGGTCCTTGGAGCTTTGATAGCAATCTTTTAGTTTTCGATGAACCAACAG
GGAACACTTGCATCAACGAGCTGAACTTCAAGTATGCTTTATTTTGGATACATTTCCATGGCTTACCGAGGGTATGTTTTTGCAGGAAGTATGTAGAGGCACTCGGGAAC
TCCATCGGAACCTTCGAGACGGTTGAAGCAAACGAACAAGGGAATATCAGTGGAGAAACTTTAAGGGTTCGGATTAAAATCAACATTAATGATCCTGTAAAGAGAGGGAC
GAATGTGCAGATAGGGTCAATTGACAAGCTCAAATGGATCCCTATCACGTATGAAAAACTACCGGACTTCTGCTATCATTGCGGTAAAATTGGGCATGTAATAGAGGAAT
GTGAGGAAGAGAACGAGGAAGAGAAAATGGTAAGGAACTTTGGCGTCGAACTAAGGGAAACACAAGGCAGTAAAGAACTCAACGAGGAGGAGGAAGAGCCATCAGAACAA
CAGAATAGTGACCAACCGCCAGGAAACATTCAGGCCGCGAGGTCACTGGAGATTGGGAGGAGCTACGAGAAGGATGACACTGACATTTGTACTTCAAAACCAAAGAAATT
AGCCGTTAGATGTTCTCAGAATGATGGGGTATCAGAAAAGTCAGACAACAAAATGCATAAAGCAGGGGCTAGCGGTGCAGAAATGGGACCCATAACCCACGATGTGAAAA
GACTAGAGATAAAAAAGGGGGAAGGGTCCGTAAGTTGCTCAAAGGAAGAAGGCAATAAAAGCAATAAAAATATAGGAAGCTCTCCAAAAGTTGAAGTTCAGATCAGCAAG
GGGCTGGAAAAGGACAAAATACTTCAAGAGTCAAGAGAAGCCCAAGCTAACAAAGCGGAACATGACACGTCAGTTGATAAGGGAAGCAAGACAGTGACTAAAATGGGGGA
AAAAATGGAAACGGCTGGCACGCATGGAACCTATGCAACAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCCTGCAAAATTCTTGCTAACAAGATAGTTAATCAGGAGATGTTCATGGAAAAAATACCGAGGATATGGGGGTTGGAAGGAAGAGTGTCTATTGAGAAGGCCAT
AAGGAACCTATACTTATGCAAATTCGGAAGTCAGAGGGACAAAAACAGAGTTACCAAAGGGGGTCCTTGGAGCTTTGATAGCAATCTTTTAGTTTTCGATGAACCAACAG
GGAACACTTGCATCAACGAGCTGAACTTCAAGTATGCTTTATTTTGGATACATTTCCATGGCTTACCGAGGGTATGTTTTTGCAGGAAGTATGTAGAGGCACTCGGGAAC
TCCATCGGAACCTTCGAGACGGTTGAAGCAAACGAACAAGGGAATATCAGTGGAGAAACTTTAAGGGTTCGGATTAAAATCAACATTAATGATCCTGTAAAGAGAGGGAC
GAATGTGCAGATAGGGTCAATTGACAAGCTCAAATGGATCCCTATCACGTATGAAAAACTACCGGACTTCTGCTATCATTGCGGTAAAATTGGGCATGTAATAGAGGAAT
GTGAGGAAGAGAACGAGGAAGAGAAAATGGTAAGGAACTTTGGCGTCGAACTAAGGGAAACACAAGGCAGTAAAGAACTCAACGAGGAGGAGGAAGAGCCATCAGAACAA
CAGAATAGTGACCAACCGCCAGGAAACATTCAGGCCGCGAGGTCACTGGAGATTGGGAGGAGCTACGAGAAGGATGACACTGACATTTGTACTTCAAAACCAAAGAAATT
AGCCGTTAGATGTTCTCAGAATGATGGGGTATCAGAAAAGTCAGACAACAAAATGCATAAAGCAGGGGCTAGCGGTGCAGAAATGGGACCCATAACCCACGATGTGAAAA
GACTAGAGATAAAAAAGGGGGAAGGGTCCGTAAGTTGCTCAAAGGAAGAAGGCAATAAAAGCAATAAAAATATAGGAAGCTCTCCAAAAGTTGAAGTTCAGATCAGCAAG
GGGCTGGAAAAGGACAAAATACTTCAAGAGTCAAGAGAAGCCCAAGCTAACAAAGCGGAACATGACACGTCAGTTGATAAGGGAAGCAAGACAGTGACTAAAATGGGGGA
AAAAATGGAAACGGCTGGCACGCATGGAACCTATGCAACAAGATGA
Protein sequenceShow/hide protein sequence
MAACKILANKIVNQEMFMEKIPRIWGLEGRVSIEKAIRNLYLCKFGSQRDKNRVTKGGPWSFDSNLLVFDEPTGNTCINELNFKYALFWIHFHGLPRVCFCRKYVEALGN
SIGTFETVEANEQGNISGETLRVRIKININDPVKRGTNVQIGSIDKLKWIPITYEKLPDFCYHCGKIGHVIEECEEENEEEKMVRNFGVELRETQGSKELNEEEEEPSEQ
QNSDQPPGNIQAARSLEIGRSYEKDDTDICTSKPKKLAVRCSQNDGVSEKSDNKMHKAGASGAEMGPITHDVKRLEIKKGEGSVSCSKEEGNKSNKNIGSSPKVEVQISK
GLEKDKILQESREAQANKAEHDTSVDKGSKTVTKMGEKMETAGTHGTYATR