; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000524 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000524
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase
Genome locationchr4:9448541..9449578
RNA-Seq ExpressionLag0000524
SyntenyLag0000524
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023871998.1 uncharacterized protein LOC111984613 [Quercus suber]8.8e-4045.05Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK----SLE
        M  L WN RGLGN RT+R L  V+  E P ++FLMETK   ++ D IK  L+      V S  RSGGL+LLW   + + ++S+SE HID        S +
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK----SLE

Query:  WQGRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRRENCIRNLHGWSKR
        W  RFTGFYGNP+  +R +SW LL+RL  N++  W+  G+FNE+    EK+ G  R  +Q+  F EAIN C+L D GY G  FTW R    R   GW + 
Subjt:  WQGRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRRENCIRNLHGWSKR

Query:  RL
        RL
Subjt:  RL

XP_023903659.1 uncharacterized protein LOC112015491 [Quercus suber]8.8e-4045.05Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK----SLE
        M  L WN RGLGN RT+R L  V+  E P ++FLMETK   ++ D IK  L+      V S  RSGGL+LLW   + + ++S+SE HID        S +
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK----SLE

Query:  WQGRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRRENCIRNLHGWSKR
        W  RFTGFYGNP+  +R +SW LL+RL  N++  W+  G+FNE+    EK+ G  R  +Q+  F EAIN C+L D GY G  FTW R    R   GW + 
Subjt:  WQGRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRRENCIRNLHGWSKR

Query:  RL
        RL
Subjt:  RL

XP_030957478.1 uncharacterized protein LOC115979567 [Quercus lobata]2.6e-3946.7Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTF-CKSLEWQG
        M+ L WN RGLGNPR++R LC ++    P  VFL +TK   +  D  K S+ F +   V S+GRSGGL LLW  +I + ++S+S+ HID    + L ++ 
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTF-CKSLEWQG

Query:  RFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTW
        R TGFYGNPE  +R++SW+LL  L       W+  G+FNEI S  EK  G++R+ KQ+ EFREAIN CR +D G+ G +FTW
Subjt:  RFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTW

XP_041009372.1 uncharacterized protein LOC121253428 [Juglans microcarpa x Juglans regia]6.7e-4044.39Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCKSLEWQGR
        MKTL WN R LGNPRT+ +LCH++    P ++FLMETK    KCD I R +R +  + V   GR GGL+LLW+ ++E++I ++S  HI+ +  + E   R
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCKSLEWQGR

Query:  F--TGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN
        +  TGFYG PE   R ++W+LL  L  ND   W V G+FNEI + +EK  G +R  KQ+  FR  + R  L   G+ GDKFTW  ++
Subjt:  F--TGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN

XP_042974797.1 uncharacterized protein LOC122306435 [Carya illinoinensis]5.2e-4042.78Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFC--KSLEWQ
        MK L WN RGLGNPRT+++LC ++  +KP IVFLMETK  S K +W+K  + F + + V   G  GGL+L W+  +E+++ ++S+ HI+++   +  ++ 
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFC--KSLEWQ

Query:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN
           TGFYG+PEV KR+++W +LE    +  E W V G+FNEI  D EK+ G  R   Q+  FREA+  C L D G+ G++FTW  ++
Subjt:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN

TrEMBL top hitse value%identityAlignment
A0A1U8JLR3 uncharacterized protein LOC1079069783.6e-3943.39Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK----SLE
        MKT+ WNVRGLG+PR +R LC  +    PQ+VFLMETK D  + + ++R   F +   + + G  GGL L W  +IEI I+S+S  H+D   K     +E
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK----SLE

Query:  WQGRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN
        W  R+TGFYG+P V  + DSW LL++L +N    W+V G+F+EI    EK  G  R   ++  FRE +  C L D GY G  FTW + N
Subjt:  WQGRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN

A0A2N9G8I6 Reverse transcriptase domain-containing protein2.3e-3842.5Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCKSLEWQ-G
        M  L WN +GLGNP  +R L H++  + P+++FLMETK D+ + + I+  L FD+++ V S GRSGGL LLW ++ E+ I+++S+ HID    S + +  
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCKSLEWQ-G

Query:  RFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTW-RRENCIRNLHGWSKRRL
        R TGFYG PE  +RR+SW LL+ L   D   W   G+FNEI +  EK  G +R+ +QI EF+EA+N C  +D G+ G  +TW    +   N+ G   R L
Subjt:  RFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTW-RRENCIRNLHGWSKRRL

A0A5B6U6G4 Reverse transcriptase1.6e-3942.78Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK--SLEWQ
        MK  CWN RGLG+PR +R L +++    P +VFLMETK DS   D ++RS  F +   V++ G  GGL L W  +I + ++S+S+ HID   K   ++ +
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK--SLEWQ

Query:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN
         RFTGFYG+P V  ++  W LLERL ++    W+V G+FNEI    EK+ G  R+P+++  FR+ +  C L+D G+ G  FTW R N
Subjt:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN

A0A5B6UXQ7 Reverse transcriptase1.0e-3842.78Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK--SLEWQ
        MK + WNVRGLG+PR  R L + +  + PQ+VFLMETK D  + + ++    F +   + +NG  GGL L W  ++ + +KS+S  HID   K  +L+  
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCK--SLEWQ

Query:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN
         RFTGFYG+P    + DSW LL +L E+    W+V G+FNEI    EK+ G  R  +++  FREA+  C+L D GY G +FTW R N
Subjt:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN

A0A5B6WXI9 Reverse transcriptase8.0e-3940.64Show/hide
Query:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFC--KSLEWQ
        MKT+CWNVRGLG+PR +R L ++   + P IVFLMETK +  + + ++R   F   + +++ G  GGL L W  +I + ++S+S+ HID      S++ +
Subjt:  MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFC--KSLEWQ

Query:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN
         RFTGFYG+P   +R   W LL+RL + ++  W+V G+FNEI    EK  G  +  K++  FR+ +  C+L D GY G ++TW R N
Subjt:  GRFTGFYGNPEVVKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRREN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACATTATGTTGGAATGTTCGAGGTTTGGGGAATCCTCGAACAATCCGGAATCTCTGCCATGTGATTGATGGTGAAAAACCCCAAATAGTCTTCTTAATGGAAAC
GAAATGTGATTCTAGTAAATGCGATTGGATCAAACGAAGTTTGAGGTTTGATCATAGTTGGTGTGTGCAAAGTAATGGTAGAAGTGGTGGTCTACTTTTGCTTTGGAATT
CTAACATTGAGATCAAGATAAAGTCTTGGTCTGAAGGACATATAGATACGTTCTGCAAGAGCTTAGAGTGGCAGGGGCGGTTCACGGGGTTCTATGGCAACCCGGAGGTA
GTCAAAAGAAGGGATTCCTGGGAGCTTTTAGAGAGGCTCTTCGAAAATGATGCAGAGCAATGGATTGTCGGGGGCGAATTTAACGAAATCTGGTCAGATGAAGAGAAAAA
ATGTGGGTCTAAAAGAAATCCCAAGCAGATAAGGGAATTCAGAGAAGCCATCAATAGATGTAGACTCTTAGATGCCGGCTATGGAGGTGACAAATTTACTTGGCGAAGAG
AGAATTGCATTAGGAATCTTCACGGATGGAGTAAGAGAAGGTTAAAAGGCAGCATAAGTGAGGCAGTTAAAAGAAAAGAAGCTGAAGTGATGAATTTAAACCTGAACGAG
GACAATAACAGCATGAGCAAAGTGGAGGAAGCAGAAGCCGAGTTGGAGGCTCTTCTTGAAGTAGATCTAGAGAGAGGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACATTATGTTGGAATGTTCGAGGTTTGGGGAATCCTCGAACAATCCGGAATCTCTGCCATGTGATTGATGGTGAAAAACCCCAAATAGTCTTCTTAATGGAAAC
GAAATGTGATTCTAGTAAATGCGATTGGATCAAACGAAGTTTGAGGTTTGATCATAGTTGGTGTGTGCAAAGTAATGGTAGAAGTGGTGGTCTACTTTTGCTTTGGAATT
CTAACATTGAGATCAAGATAAAGTCTTGGTCTGAAGGACATATAGATACGTTCTGCAAGAGCTTAGAGTGGCAGGGGCGGTTCACGGGGTTCTATGGCAACCCGGAGGTA
GTCAAAAGAAGGGATTCCTGGGAGCTTTTAGAGAGGCTCTTCGAAAATGATGCAGAGCAATGGATTGTCGGGGGCGAATTTAACGAAATCTGGTCAGATGAAGAGAAAAA
ATGTGGGTCTAAAAGAAATCCCAAGCAGATAAGGGAATTCAGAGAAGCCATCAATAGATGTAGACTCTTAGATGCCGGCTATGGAGGTGACAAATTTACTTGGCGAAGAG
AGAATTGCATTAGGAATCTTCACGGATGGAGTAAGAGAAGGTTAAAAGGCAGCATAAGTGAGGCAGTTAAAAGAAAAGAAGCTGAAGTGATGAATTTAAACCTGAACGAG
GACAATAACAGCATGAGCAAAGTGGAGGAAGCAGAAGCCGAGTTGGAGGCTCTTCTTGAAGTAGATCTAGAGAGAGGTGGTTAA
Protein sequenceShow/hide protein sequence
MKTLCWNVRGLGNPRTIRNLCHVIDGEKPQIVFLMETKCDSSKCDWIKRSLRFDHSWCVQSNGRSGGLLLLWNSNIEIKIKSWSEGHIDTFCKSLEWQGRFTGFYGNPEV
VKRRDSWELLERLFENDAEQWIVGGEFNEIWSDEEKKCGSKRNPKQIREFREAINRCRLLDAGYGGDKFTWRRENCIRNLHGWSKRRLKGSISEAVKRKEAEVMNLNLNE
DNNSMSKVEEAEAELEALLEVDLERGG