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Lag0000526 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000526
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotransposon gag protein
Genome locationchr4:9458356..9458688
RNA-Seq ExpressionLag0000526
SyntenyLag0000526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]1.1e-1356.96Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M  L+ K F E N+D K+ S +PSRMK K SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

KAA0044978.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-1356.96Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M +L+ K F E N+D K+ S +PSRMK K SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.4e-1355.7Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M +L+ K F E N+D K+ + +PSRMK K SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

KAA0068201.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.7e-1458.23Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M +L+ K F E N+D K+ S +PSRMK K SV INTEGSL VKP  II TNP ++G +Q  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.4e-1355.7Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M +L+ K F E N+D K+ + +PSRMK K SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

TrEMBL top hitse value%identityAlignment
A0A5A7SRE2 Ty3-gypsy retrotransposon protein5.2e-1456.96Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M  L+ K F E N+D K+ S +PSRMK K SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

A0A5A7TQ06 Retrotransposon gag protein5.2e-1456.96Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M +L+ K F E N+D K+ S +PSRMK K SV INTEGSL VKP  II TNP ++G ++  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

A0A5A7U974 Retrotransposon gag protein6.8e-1454.32Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDKGF
        FDRLK+T+DQ +R+M +L+ K F E N+D K+ S +PSR+K K S+ INTEGSL VKP  II TNP ++G ++  DE+K F
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDKGF

A0A5A7V6H5 Ty3-gypsy retrotransposon protein6.8e-1456.96Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+ Q +R+M +L+ K F E N+D K+ S +PSRMK K SV INTEGSL VKP  II TNPT++G ++  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

A0A5A7VRG7 Retrotransposon gag protein1.8e-1458.23Show/hide
Query:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK
        FDRLK+T+DQ +R+M +L+ K F E N+D K+ S +PSRMK K SV INTEGSL VKP  II TNP ++G +Q  DE+K
Subjt:  FDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGACGTTCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTATCTCCACATCGAAGAAAAGTCAACCTTCAACATCTATTTTGATCGCCTCAAAGTAACAAG
CGATCAACCTAAAAGAAAAATGGATAACTTGGAGGTGAAAATTTTCGATGAAGTAAACAACGACATGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGATGAAGTTCT
CTGTTCTCATAAATACAGAAGGTTCCTTGAAAGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGGGCTTT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGACGTTCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTATCTCCACATCGAAGAAAAGTCAACCTTCAACATCTATTTTGATCGCCTCAAAGTAACAAG
CGATCAACCTAAAAGAAAAATGGATAACTTGGAGGTGAAAATTTTCGATGAAGTAAACAACGACATGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGATGAAGTTCT
CTGTTCTCATAAATACAGAAGGTTCCTTGAAAGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGATCTGATCAAGACCATGATGAAGATAAGGGCTTT
TAA
Protein sequenceShow/hide protein sequence
MFDVHLHSTFSFPKAKYLHIEEKSTFNIYFDRLKVTSDQPKRKMDNLEVKIFDEVNNDMKLQSSIPSRMKMKFSVLINTEGSLKVKPNLIILTNPTSQGSDQDHDEDKGF