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Lag0000527 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000527
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:9476556..9477068
RNA-Seq ExpressionLag0000527
SyntenyLag0000527
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQQ10307.1 uncharacterized protein Pyn_17609 [Prunus yedoensis var. nudiflora]1.9e-1729.22Show/hide
Query:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD
        E+++ + E+  +  E+EN  + V++       + L  S++GK+      + +  ++T    WN   +++V+ +G NLFLF   +E D+ +V+R GPW FD
Subjt:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD

Query:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAIVKDLE
        K L++L  P   V P+ M   YA+FW+   ++P+     +M  ++GN++ + L+
Subjt:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAIVKDLE

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]7.7e-2740.52Show/hide
Query:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIP-NDLMVEKIGPNLFLFSLRSESDQTRVMRQGP
        MA  ++LE W+ F LT+EE+   VD+D  A   T + L  S+I KLL+ + IS  V++ T K+AW +      V+ IG N+FLF+    SD+ R++R GP
Subjt:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIP-NDLMVEKIGPNLFLFSLRSESDQTRVMRQGP

Query:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI
        W FD+ L+++  P+ + KP  M+F   + WV+F DL +   N++M  +LGNAI
Subjt:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]4.2e-1730.82Show/hide
Query:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD
        +++ + WE F  T  +EN  V +DR   ++T+ ++   ++ KL   + IS + +R   K  W + N    E +G N+++   +S S+++RV+  GPW F+
Subjt:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD

Query:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLG
        K LLVL+ P    +P  M FN+  FW+   ++P +  +  M   LG
Subjt:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLG

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]7.2e-3347.37Show/hide
Query:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPW
        M  E++L +W++F LT+EE+   +DVD  A  +  Q L +S++GKLLA +IIS DV+ R   LAW + + L VE IG NLFLF    E D  RVM+ GPW
Subjt:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPW

Query:  LFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI
         FDK L+VL KP      + +EFN   FW++  DLPM   N++M  +LGNAI
Subjt:  LFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.2e-2639.22Show/hide
Query:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLM-VEKIGPNLFLFSLRSESDQTRVMRQGP
        MA  D+LE W+ F LT+EEE T +DVD  A   T   L   ++GKL   + I+  VM+ T + AW + N+   V+ +G NLFLFS     D+ ++ + GP
Subjt:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLM-VEKIGPNLFLFSLRSESDQTRVMRQGP

Query:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI
        W FD+ L++++KP+ ++ P+ ++F     WV F DLP+    R M  +LGNA+
Subjt:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI

TrEMBL top hitse value%identityAlignment
A0A314YVX1 CCHC-type domain-containing protein9.2e-1829.22Show/hide
Query:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD
        E+++ + E+  +  E+EN  + V++       + L  S++GK+      + +  ++T    WN   +++V+ +G NLFLF   +E D+ +V+R GPW FD
Subjt:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD

Query:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAIVKDLE
        K L++L  P   V P+ M   YA+FW+   ++P+     +M  ++GN++ + L+
Subjt:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAIVKDLE

A0A6J1BSZ1 uncharacterized protein LOC1110054813.7e-2740.52Show/hide
Query:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIP-NDLMVEKIGPNLFLFSLRSESDQTRVMRQGP
        MA  ++LE W+ F LT+EE+   VD+D  A   T + L  S+I KLL+ + IS  V++ T K+AW +      V+ IG N+FLF+    SD+ R++R GP
Subjt:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIP-NDLMVEKIGPNLFLFSLRSESDQTRVMRQGP

Query:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI
        W FD+ L+++  P+ + KP  M+F   + WV+F DL +   N++M  +LGNAI
Subjt:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI

A0A6J1D765 uncharacterized protein LOC1110179022.0e-1730.82Show/hide
Query:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD
        +++ + WE F  T  +EN  V +DR   ++T+ ++   ++ KL   + IS + +R   K  W + N    E +G N+++   +S S+++RV+  GPW F+
Subjt:  EDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFD

Query:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLG
        K LLVL+ P    +P  M FN+  FW+   ++P +  +  M   LG
Subjt:  KFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLG

A0A6J1DU55 uncharacterized protein LOC1110231353.5e-3347.37Show/hide
Query:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPW
        M  E++L +W++F LT+EE+   +DVD  A  +  Q L +S++GKLLA +IIS DV+ R   LAW + + L VE IG NLFLF    E D  RVM+ GPW
Subjt:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPW

Query:  LFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI
         FDK L+VL KP      + +EFN   FW++  DLPM   N++M  +LGNAI
Subjt:  LFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI

A0A6J1DX30 uncharacterized protein LOC1110248741.1e-2639.22Show/hide
Query:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLM-VEKIGPNLFLFSLRSESDQTRVMRQGP
        MA  D+LE W+ F LT+EEE T +DVD  A   T   L   ++GKL   + I+  VM+ T + AW + N+   V+ +G NLFLFS     D+ ++ + GP
Subjt:  MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLM-VEKIGPNLFLFSLRSESDQTRVMRQGP

Query:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI
        W FD+ L++++KP+ ++ P+ ++F     WV F DLP+    R M  +LGNA+
Subjt:  WLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein1.6e-0631.71Show/hide
Query:  FLFSLRSESDQTRVMRQGPWLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI--VKDLEFPI
        F+F+L  E     V+R+GPW F+ ++++L +     +P +  F +  FWV    +P    NR +VE +G A+  V D +F +
Subjt:  FLFSLRSESDQTRVMRQGPWLFDKFLLVLSKPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAI--VKDLEFPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCGAGGATATGCTTGAGAATTGGGAAAGATTCAACCTCACTGCTGAGGAGGAGAACACTGAAGTTGATGTCGATAGACAGGCGACTTTGGTTACTAGTCAATC
GCTCGGTTTTAGCATCATTGGGAAATTACTAGCTCCCCAGATTATCTCCGGTGATGTGATGAGACGGACGTTCAAGTTAGCATGGAACATTCCAAATGACCTAATGGTGG
AAAAAATAGGTCCTAATTTGTTCCTTTTTTCACTGAGATCGGAATCGGACCAAACTCGGGTCATGAGGCAGGGGCCATGGCTTTTTGACAAATTCCTGTTGGTTTTATCG
AAACCCATCCCAATGGTGAAGCCTACATTGATGGAATTCAATTATGCAAACTTTTGGGTGAATTTTTGTGACCTACCAATGGATTTATATAATAGGTCGATGGTGGAGAA
ATTGGGCAACGCAATCGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTCGAGGATATGCTTGAGAATTGGGAAAGATTCAACCTCACTGCTGAGGAGGAGAACACTGAAGTTGATGTCGATAGACAGGCGACTTTGGTTACTAGTCAATC
GCTCGGTTTTAGCATCATTGGGAAATTACTAGCTCCCCAGATTATCTCCGGTGATGTGATGAGACGGACGTTCAAGTTAGCATGGAACATTCCAAATGACCTAATGGTGG
AAAAAATAGGTCCTAATTTGTTCCTTTTTTCACTGAGATCGGAATCGGACCAAACTCGGGTCATGAGGCAGGGGCCATGGCTTTTTGACAAATTCCTGTTGGTTTTATCG
AAACCCATCCCAATGGTGAAGCCTACATTGATGGAATTCAATTATGCAAACTTTTGGGTGAATTTTTGTGACCTACCAATGGATTTATATAATAGGTCGATGGTGGAGAA
ATTGGGCAACGCAATCGTGAAGGATTTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGTTCGTAA
Protein sequenceShow/hide protein sequence
MAFEDMLENWERFNLTAEEENTEVDVDRQATLVTSQSLGFSIIGKLLAPQIISGDVMRRTFKLAWNIPNDLMVEKIGPNLFLFSLRSESDQTRVMRQGPWLFDKFLLVLS
KPIPMVKPTLMEFNYANFWVNFCDLPMDLYNRSMVEKLGNAIVKDLEFPIPLQRKQLDRS