; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000532 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000532
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZf-CCHC domain-containing protein
Genome locationchr4:9510950..9511630
RNA-Seq ExpressionLag0000532
SyntenyLag0000532
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022930200.1 uncharacterized protein LOC111436716 [Cucurbita moschata]4.0e-2335.68Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        ++ S+V    D     WKE F++ LP + S R+   L+ +++G I W +L+Y  + S++I  GL +CNE K+Q K+  +  +R +++  FC QYGC+ IE
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRP-QFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLE
         PS       RR+  + + K  ++ RP + Y+ +P +       +  P Y +R+   P KP    ++ K +  CFKC++EGHYAN+CP R +INELD+E
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRP-QFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLE

XP_022974313.1 uncharacterized protein LOC111472952 [Cucurbita maxima]1.2e-2234.5Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        M+ ++V    +     WKE F++ LP Y S R+   L+ +++G I W + +Y+ + S++I  GL +CNE K+Q K+  +   + +++  FC QYGC+ I+
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEEE
         PS        RR   + Y+  YN       R   KY  +   +  P Y K++   P K    T+R K +  CFKC++EGHYAN+CP + +INELD+++E
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEEE

XP_023520850.1 uncharacterized protein LOC111784362 [Cucurbita pepo subsp. pepo]2.0e-2235Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        M+ S+V    D     WKE F++ LP + S R+   L+ +++G I W +L+Y  + S++I  GL +CNE K+Q K+  +  +R +++  FC QYGC+ IE
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEEE
         P     K  R++  + + K  ++ RP+        Y  +   +  P Y +R+   P K    T+R K K  CFKC+ EGHYA +CP + +INELD+++E
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEEE

XP_023522280.1 uncharacterized protein LOC111786173, partial [Cucurbita pepo subsp. pepo]1.1e-2335.24Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        M++S+V    D     WKE F++ LP + S R+   L+ +++G I W +L+Y  + S++I  GL +CNE K+Q K+  +  S  +++  FC QYGC+ IE
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNP--RYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLE
         PS        RR   + +   YN            Y PR++Y   P    K   SR    P + T+R K K  CFKC++EGHYAN CP R +INELD++
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNP--RYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLE

Query:  EEYSSDY---------DSSDQELNEFQ
        +E  +            SS+ E+ E Q
Subjt:  EEYSSDY---------DSSDQELNEFQ

XP_023552915.1 uncharacterized protein LOC111810441 [Cucurbita pepo subsp. pepo]2.8e-2435.82Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        M+ S+V    D     WKE F++ELP + S R+   L+ +++G I W +L+Y  + S++I  GL +CNE K+Q K+  +  +R +++  FC QYGC+ IE
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRP-QFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEE
         PS       RR+  + + K  ++ RP + Y+ +P +       +  P Y +R+   P KP    ++ K +  CFKC++EGHYAN+CP R +INEL++++
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRP-QFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEE

Query:  E
        E
Subjt:  E

TrEMBL top hitse value%identityAlignment
A0A151R9C8 Polyprotein1.5e-2029.24Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        +F+S++   +D     WKE+FI  LP   SE+V M L   +   I +++LTY  + S +++ G+ +CN+ K+Q K++K   +  R++  FC QYG   I 
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPT-RRINELDL---
         PS      ++++  +R + +Q + +  +Y++  +K         N  YKK  S++  KP++    +K    C+KC + GH+AN+C   ++IN+L++   
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPT-RRINELDL---

Query:  --------------EEEYSSDYDSSDQELNEFQFND
                      EEE +SD D  +QE+ E   N+
Subjt:  --------------EEEYSSDYDSSDQELNEFQFND

A0A392M7U4 CCHC-type domain-containing protein (Fragment)8.4e-1934.71Show/hide
Query:  FISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDG-NINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        F++RV+ +K+P+  HWK KFID LP   +E+V  +LR + DG NIN++ LTY  + S  IN GL +CN+IK++ +++K + +    +  FC Q+  + ++
Subjt:  FISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDG-NINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRR------YYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTF---CFKCQKEGHYANRCPTRR-
        +P  P NK   R N  R      Y+K  YN  P  Y+++      R++  P+P+ +K         N T  + K K     C KC K GHYAN+C  +R 
Subjt:  EPSRPSNKIIRRRNSRR------YYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTF---CFKCQKEGHYANRCPTRR-

Query:  INELDLEEEYSSDYD-----SSDQELN----EFQF-NDTSSE
        +NE++ ++   +  +     SSD ELN    E  F +D+SS+
Subjt:  INELDLEEEYSSDYD-----SSDQELN----EFQF-NDTSSE

A0A6J1EW44 uncharacterized protein LOC1114366181.6e-2234.22Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        M+ S+V    D     WKE F++ LP + S R+   L+ +++G I W +L+Y  + S +I  GL +CNE K+Q K+  +  +R +++  FC QYGC+ IE
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEEE
         PS       RR+  + + K  ++ RP+        Y+ +   +  PRY +R+   P K    T+R K K   FKC++EGHY N+CP R +INELD+++E
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLEEE

Query:  YSSDY---------DSSDQELNEFQ
          +            SS+ E+ E Q
Subjt:  YSSDY---------DSSDQELNEFQ

A0A6J1EWB4 uncharacterized protein LOC1114367161.9e-2335.68Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        ++ S+V    D     WKE F++ LP + S R+   L+ +++G I W +L+Y  + S++I  GL +CNE K+Q K+  +  +R +++  FC QYGC+ IE
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRP-QFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLE
         PS       RR+  + + K  ++ RP + Y+ +P +       +  P Y +R+   P KP    ++ K +  CFKC++EGHYAN+CP R +INELD+E
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRP-QFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTR-RINELDLE

A0A6J1EYM2 uncharacterized protein LOC1114397301.8e-2133.91Show/hide
Query:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE
        M+ S+V    D     WKE F++ LP + S R+   L+ + +G I W +L+Y  + S++I  GL + NE K+Q K+  +  +R +++  FC QYGC+ IE
Subjt:  MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIE

Query:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQ-----TTYRNKGKTFCFKCQKEGHYANRCPTR-RINEL
         PS                +N+    P+ Y      Y PR+ Y    R K  QS+ PA   +      T+  K K  CFKC++EGHYAN+CP R +INEL
Subjt:  EPSRPSNKIIRRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQ-----TTYRNKGKTFCFKCQKEGHYANRCPTR-RINEL

Query:  DLEEEYSSDY---------DSSDQELNEFQ
        D+++E  +            SS+ E+ E Q
Subjt:  DLEEEYSSDY---------DSSDQELNEFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCATTTCCAGGGTCTATTATATGAAAGATCCTGATTGGAACCACTGGAAAGAGAAGTTCATAGACGAACTTCCTAGCTATGTCTCGGAAAGAGTTTATATGACTCT
TCGAGAACGCTTTGATGGTAATATCAATTGGAGCAGTTTGACCTACGATGATTTAACATCTTATGTTATCAACTGTGGTCTACACATCTGCAATGAAATCAAGGTTCAAC
GCAAAGTTCAAAAGAATGAAAAGAGCAGATTAAGAGATATGAAAGCTTTCTGCTCTCAATACGGGTGCGAACGAATTGAAGAGCCAAGTCGCCCCTCTAATAAAATCATC
CGACGGCGTAACAGCCGAAGGTACTACAAAAATCAATATAATGATAGACCCCAGTTCTATCAAAGGCAACCAAGGAAGTATATTCCCAGAAAGCAATACACTCCAAATCC
TCGGTATAAGAAAAGACAATCAAGGCACCCTGCTAAGCCTAATCAAACCACTTATAGAAACAAAGGGAAAACCTTTTGTTTCAAATGTCAGAAGGAAGGACACTATGCGA
ACAGGTGTCCAACCAGAAGAATAAATGAGCTTGATTTAGAAGAAGAATATTCTTCTGATTATGATAGCTCTGATCAAGAACTAAACGAGTTTCAATTCAACGACACCAGC
TCCGAAGTTTCCAGTCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCATTTCCAGGGTCTATTATATGAAAGATCCTGATTGGAACCACTGGAAAGAGAAGTTCATAGACGAACTTCCTAGCTATGTCTCGGAAAGAGTTTATATGACTCT
TCGAGAACGCTTTGATGGTAATATCAATTGGAGCAGTTTGACCTACGATGATTTAACATCTTATGTTATCAACTGTGGTCTACACATCTGCAATGAAATCAAGGTTCAAC
GCAAAGTTCAAAAGAATGAAAAGAGCAGATTAAGAGATATGAAAGCTTTCTGCTCTCAATACGGGTGCGAACGAATTGAAGAGCCAAGTCGCCCCTCTAATAAAATCATC
CGACGGCGTAACAGCCGAAGGTACTACAAAAATCAATATAATGATAGACCCCAGTTCTATCAAAGGCAACCAAGGAAGTATATTCCCAGAAAGCAATACACTCCAAATCC
TCGGTATAAGAAAAGACAATCAAGGCACCCTGCTAAGCCTAATCAAACCACTTATAGAAACAAAGGGAAAACCTTTTGTTTCAAATGTCAGAAGGAAGGACACTATGCGA
ACAGGTGTCCAACCAGAAGAATAAATGAGCTTGATTTAGAAGAAGAATATTCTTCTGATTATGATAGCTCTGATCAAGAACTAAACGAGTTTCAATTCAACGACACCAGC
TCCGAAGTTTCCAGTCAATGA
Protein sequenceShow/hide protein sequence
MFISRVYYMKDPDWNHWKEKFIDELPSYVSERVYMTLRERFDGNINWSSLTYDDLTSYVINCGLHICNEIKVQRKVQKNEKSRLRDMKAFCSQYGCERIEEPSRPSNKII
RRRNSRRYYKNQYNDRPQFYQRQPRKYIPRKQYTPNPRYKKRQSRHPAKPNQTTYRNKGKTFCFKCQKEGHYANRCPTRRINELDLEEEYSSDYDSSDQELNEFQFNDTS
SEVSSQ