| GenBank top hits | e value | %identity | Alignment |
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| KAG6605957.1 Replication factor C subunit 1, partial [Cucurbita argyrosperma subsp. sororia] | 3.5e-49 | 69.46 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PKHPKTVLIMDEVDGMSAGDRGGVADLI IK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| XP_022995017.1 replication factor C subunit 1 isoform X1 [Cucurbita maxima] | 7.0e-50 | 70.06 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PKHPKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| XP_022995018.1 replication factor C subunit 1 isoform X2 [Cucurbita maxima] | 7.0e-50 | 70.06 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PKHPKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| XP_023532343.1 replication factor C subunit 1 isoform X1 [Cucurbita pepo subsp. pepo] | 5.3e-50 | 70.06 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PKHPKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| XP_023532344.1 replication factor C subunit 1 isoform X2 [Cucurbita pepo subsp. pepo] | 5.3e-50 | 70.06 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PKHPKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1DHR4 Replication factor C subunit 1 | 2.3e-46 | 66.06 | Show/hide |
Query: KGKPPTSNSSV----KVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK------------
K +P SN + VKQLHDWLAHWNENF D SKKKGKKLNDS AKK V LCGGPGIGKTTSAKLVS+MLGY+AI+VNAS NR K
Subjt: KGKPPTSNSSV----KVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK------------
Query: -------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PK PKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: -------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| A0A6J1H1H3 Replication factor C subunit 1 | 2.9e-49 | 69.46 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PK PKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| A0A6J1H397 Replication factor C subunit 1 | 2.9e-49 | 69.46 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PK PKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| A0A6J1JXK0 Replication factor C subunit 1 | 3.4e-50 | 70.06 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PKHPKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| A0A6J1K6Q0 Replication factor C subunit 1 | 3.4e-50 | 70.06 | Show/hide |
Query: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
EK K K P N S+ VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKK + LCGGPGIGKTTSAKLVS+MLGYEAI+VNAS NR K
Subjt: EKGKGKPPT---SNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK----------
Query: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
L++R PKHPKTVLIMDEVDGMSAGDRGGVADLI SIK SKIPIICICNDR
Subjt: ---------------LNYR---PKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O60182 Replication factor C subunit 1 | 9.5e-18 | 42.07 | Show/hide |
Query: VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK---------------------LNYRP--
V++L WL +++N +K L G K V L G PGIGKTT+A LV+K+ GY+ +++NAS R K P
Subjt: VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK---------------------LNYRP--
Query: -KHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
+ VLIMDE+DGMS+GDRGGV L + IK S IPIICICNDR
Subjt: -KHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| P35600 Replication factor C subunit 1 | 1.2e-17 | 38.46 | Show/hide |
Query: IEKHAGEKGKGKPPTSNSSVKVKQLHDWLAHWNENFLDGGSKKK----GKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVKLNY
++KH K + ++ V +L +WL+ W N DG K + K +D K L G PGIGKTT+A LV K LG++A++ NAS R K
Subjt: IEKHAGEKGKGKPPTSNSSVKVKQLHDWLAHWNENFLDGGSKKK----GKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVKLNY
Query: RPK---------------------HPKTVLIMDEVDGMSAG-DRGGVADLIVSIKISKIPIICICNDRD
+ + K VLIMDEVDGM+ DRGG+ +LI IK S IPIIC+CNDR+
Subjt: RPK---------------------HPKTVLIMDEVDGMSAG-DRGGVADLIVSIKISKIPIICICNDRD
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| P38630 Replication factor C subunit 1 | 5.2e-16 | 39.19 | Show/hide |
Query: VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNAS--------------------------YNRVKLN
V +L +WLA+W EN K GK + SG + L G PGIGKTT+A LV++ LGY+ ++ NAS +N N
Subjt: VKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNAS--------------------------YNRVKLN
Query: YRPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDRD
KH V+IMDEVDGMS GDRGGV L + + P+I ICN+R+
Subjt: YRPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDRD
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| Q2R2B4 Replication factor C subunit 1 | 1.3e-38 | 57.23 | Show/hide |
Query: EKGKGKPPTS--NSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK-----------
EK + K P + VKQLHDWL W + FL G K KGKK DSGAKK V L G PGIGKTT+AK+VS+MLG +AI+VNAS +R K
Subjt: EKGKGKPPTS--NSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVK-----------
Query: --------------LNY---RPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
LNY R K PK VL+MDEVDGMSAGDRGGVADLI SIK+SKIPIICICNDR
Subjt: --------------LNY---RPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| Q9C587 Replication factor C subunit 1 | 5.6e-42 | 59.28 | Show/hide |
Query: EKGKGKPP---TSNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVKLNY-------
EK + K P N S+ V QLH+WL+HW++ F GSK KGKKLND+G+KK V L G PGIGKTTSAKLVS+MLG++A++VNAS +R K N
Subjt: EKGKGKPP---TSNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVKLNY-------
Query: ---------------------RPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
R KHPKTVLIMDEVDGMSAGDRGGVADLI SIKISKIPIICICNDR
Subjt: ---------------------RPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G04730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1.1e-08 | 24.81 | Show/hide |
Query: VVRWRVIVDKYRAQIVSKASTFVAKALEEDKEKLEILLSTAQGEVMLLSDQIGYLVEE--EEIEKHAGEKGKGKPPTSNSSVKVKQLHDWLAH-------
V+ ++ VDKY S+F + L +++ E+LL Q + + +I E +++H+ K + ++ + KQ + W
Subjt: VVRWRVIVDKYRAQIVSKASTFVAKALEEDKEKLEILLSTAQGEVMLLSDQIGYLVEE--EEIEKHAGEKGKGKPPTSNSSVKVKQLHDWLAH-------
Query: ---WNENFLD-GGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNAS-----------------YNRVKLNYRPKHPKTVLIMDEV
N N D K KL +K++ LCG PG+GKTT A + +K GY +++NAS N V + RPK L++DE+
Subjt: ---WNENFLD-GGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNAS-----------------YNRVKLNYRPKHPKTVLIMDEV
Query: DGMSAGDRGGVADLIVSIKISK---------------------------IPIICICND
DG + GD G D+I+ + +++ P+ICICND
Subjt: DGMSAGDRGGVADLIVSIKISK---------------------------IPIICICND
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| AT2G32040.1 Major facilitator superfamily protein | 1.2e-15 | 72.58 | Show/hide |
Query: DFVPLFGYRRRSYLILSRLVGAFSLSFMATIVNSKYGTATCILLGSLSVAFSDVDSDSNTEE
D VPLFGYRRRSYL+LS L+GAFS S MA V+SKY A CILLGSLSVAFSDV DS E
Subjt: DFVPLFGYRRRSYLILSRLVGAFSLSFMATIVNSKYGTATCILLGSLSVAFSDVDSDSNTEE
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| AT5G22010.1 replication factor C1 | 3.9e-43 | 59.28 | Show/hide |
Query: EKGKGKPP---TSNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVKLNY-------
EK + K P N S+ V QLH+WL+HW++ F GSK KGKKLND+G+KK V L G PGIGKTTSAKLVS+MLG++A++VNAS +R K N
Subjt: EKGKGKPP---TSNSSVKVKQLHDWLAHWNENFLDGGSKKKGKKLNDSGAKKVVSLCGGPGIGKTTSAKLVSKMLGYEAIKVNASYNRVKLNY-------
Query: ---------------------RPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
R KHPKTVLIMDEVDGMSAGDRGGVADLI SIKISKIPIICICNDR
Subjt: ---------------------RPKHPKTVLIMDEVDGMSAGDRGGVADLIVSIKISKIPIICICNDR
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