; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000550 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000550
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr4:9731779..9732714
RNA-Seq ExpressionLag0000550
SyntenyLag0000550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031318.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.2e-4448.05Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQAS+SLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

TYK00436.1 uncharacterized protein E5676_scaffold169G00400 [Cucumis melo var. makuwa]1.2e-4448.05Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQAS+SLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

TYK09469.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.2e-4448.05Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQAS+SLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]5.2e-4548.48Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQASSSLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]1.2e-6260Show/hide
Query:  LEECYSIVGG-GDNYTSLV-------DNDFQVIVDINIAHDLKEIDVFASKEVVSK-------------------------------------ASHYKRS
        LE   S+V    +NY S+V       D+DFQVI+DI+IA DLKE DVFASKE++SK                                     AS YK S
Subjt:  LEECYSIVGG-GDNYTSLV-------DNDFQVIVDINIAHDLKEIDVFASKEVVSK-------------------------------------ASHYKRS

Query:  ELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLKE
        +LWMLRK+ D H CSMN+VQ+SH+QAS+SLIGDCL+NEFR SSS+S TPKDIV+KVRKELGVNISYYKA+RAKE +MKSLKGDACESYA IP FL+KL+E
Subjt:  ELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLKE

Query:  MNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        +N GTFT YE D DG FKYC+MAIGSSIEG
Subjt:  MNLGTFTTYEADKDGPFKYCFMAIGSSIEG

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like5.6e-4548.05Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQAS+SLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

A0A5A7VG38 Protein FAR1-RELATED SEQUENCE 4-like7.4e-4548.05Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         +LW LRKY  +H CS+N +Q++HKQASSSLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

A0A5D3C8T8 SWIM-type domain-containing protein5.6e-4548.05Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQAS+SLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

A0A5D3DAW8 Protein FAR1-RELATED SEQUENCE 4-like5.6e-4548.05Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQAS+SLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

A0A5D3DJR8 MuDR family transposase2.5e-4548.48Show/hide
Query:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR
        E  S+V  G DN  SL     +D+DFQ++ DI+++      DLKE D+FASKE++SK                                     AS YK 
Subjt:  ECYSIVGGG-DNYTSL-----VDNDFQVIVDINIA-----HDLKEIDVFASKEVVSK-------------------------------------ASHYKR

Query:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK
         ELW LRKY  +H CS+N +Q++HKQASSSLI DC+  +  FSS + STP DI+  +R +LGVN+SYYKA+RAKE +M SL G+A ESYA IPNF +KLK
Subjt:  SELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVSKVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLK

Query:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG
        E+N G+FT YE D +G FKYCFMAIG+ IEG
Subjt:  EMNLGTFTTYEADKDGPFKYCFMAIGSSIEG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAAGAGTGTTATAGTATTGTTGGTGGAGGTGATAATTATACTTCTCTGGTTGATAATGATTTCCAAGTTATTGTGGATATTAATATTGCTCATGATTTGAAGGA
AATCGATGTGTTTGCAAGCAAGGAAGTCGTTTCGAAGGCATCTCACTATAAGAGAAGTGAATTGTGGATGCTTAGGAAATATGCAGATAGTCACATTTGTTCTATGAATA
GTGTTCAGAGTTCTCATAAGCAAGCTTCTTCATCCCTCATTGGTGATTGTTTGAGAAATGAATTTCGTTTTAGTTCTTCTAATAGTTCAACTCCAAAGGATATTGTGAGT
AAAGTGCGTAAGGAGCTTGGCGTCAACATAAGTTATTACAAAGCTTATAGGGCAAAAGAACAGCTAATGAAGTCATTGAAAGGTGATGCATGTGAATCATATGCCTTTAT
TCCAAACTTTTTGTTGAAGTTGAAAGAAATGAATCTGGGTACATTCACAACCTATGAAGCTGATAAAGATGGGCCTTTTAAGTATTGTTTTATGGCTATTGGTTCATCAA
TTGAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAAGAGTGTTATAGTATTGTTGGTGGAGGTGATAATTATACTTCTCTGGTTGATAATGATTTCCAAGTTATTGTGGATATTAATATTGCTCATGATTTGAAGGA
AATCGATGTGTTTGCAAGCAAGGAAGTCGTTTCGAAGGCATCTCACTATAAGAGAAGTGAATTGTGGATGCTTAGGAAATATGCAGATAGTCACATTTGTTCTATGAATA
GTGTTCAGAGTTCTCATAAGCAAGCTTCTTCATCCCTCATTGGTGATTGTTTGAGAAATGAATTTCGTTTTAGTTCTTCTAATAGTTCAACTCCAAAGGATATTGTGAGT
AAAGTGCGTAAGGAGCTTGGCGTCAACATAAGTTATTACAAAGCTTATAGGGCAAAAGAACAGCTAATGAAGTCATTGAAAGGTGATGCATGTGAATCATATGCCTTTAT
TCCAAACTTTTTGTTGAAGTTGAAAGAAATGAATCTGGGTACATTCACAACCTATGAAGCTGATAAAGATGGGCCTTTTAAGTATTGTTTTATGGCTATTGGTTCATCAA
TTGAGGGTTGA
Protein sequenceShow/hide protein sequence
MLEECYSIVGGGDNYTSLVDNDFQVIVDINIAHDLKEIDVFASKEVVSKASHYKRSELWMLRKYADSHICSMNSVQSSHKQASSSLIGDCLRNEFRFSSSNSSTPKDIVS
KVRKELGVNISYYKAYRAKEQLMKSLKGDACESYAFIPNFLLKLKEMNLGTFTTYEADKDGPFKYCFMAIGSSIEG