; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000552 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000552
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:9770236..9771024
RNA-Seq ExpressionLag0000552
SyntenyLag0000552
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]7.9e-3933.61Show/hide
Query:  EKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYD
        E  I +L +    EDE   + E+ ++ I+  D+D++   V K+L  K +  E F+ LI +IW   G+V+++  G+N ++  F +K+ + +V   GPW++ 
Subjt:  EKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYD

Query:  KAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPI
        K++I+ ++ KG   I  ++F    FWV  H++P++C+N++    LA  IG  V++  E+ E   WG+ +RVKV+++++KPL+R   +K+G   +   + +
Subjt:  KAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPI

Query:  TIEKLPDFCYQCGRLGHVMIDCEEEDTEED--DEEGTQYGPWMR
          E+LPDFC+ CGR+GH + +C +ED +    D + T++G WMR
Subjt:  TIEKLPDFCYQCGRLGHVMIDCEEEDTEED--DEEGTQYGPWMR

TXG54013.1 hypothetical protein EZV62_019269 [Acer yangbiense]3.3e-3733.06Show/hide
Query:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW
        ME +   ++  K+ L +D+ G +  ++ +  E  ++ +  + + K +  K I  E F+  I  IW  + +V M+  G NI+  +F++   +KR++EGGPW
Subjt:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW

Query:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW
        ++DK +++  E  G++ +  ++FRYV FW+  HNLP+ CLNR+ G+ L   +G  VK  +  E G+  G+ +R++V ++V  PL+RG  + +G       
Subjt:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW

Query:  IPITIEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEEGTQYGPWMR
        + I  E+LP+FCY CG++GH++ DC     E       ++GPWMR
Subjt:  IPITIEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEEGTQYGPWMR

TXG72599.1 hypothetical protein EZV62_001178 [Acer yangbiense]1.4e-3534.68Show/hide
Query:  IKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDKAV
        I++L K     DE G ++E+ +  +    +DI+   V K+L  K I  E F+ LI +IW   G+V+++  G N+++  F ++  + RV   GPW +  ++
Subjt:  IKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDKAV

Query:  ILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPITIE
        I  ++  G   + ++EF    FW+  H++P++C+NR+    LA  IG  V++  E+ E   WG  LRVKVR+++SKPL+R   LK+G+  + + + +  E
Subjt:  ILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPITIE

Query:  KLPDFCYQCGRLGHVMIDCEEE
        +LP+FCY CGR+GH + +C +E
Subjt:  KLPDFCYQCGRLGHVMIDCEEE

TXG73339.1 hypothetical protein EZV62_001918 [Acer yangbiense]1.3e-3633.33Show/hide
Query:  KAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDK
        K I +L +     +E G ++E  + +IE   KD++   V K+L  K +  E F+ LI +IW   G+V+++    NI++  F  ++ + RV + GPW + K
Subjt:  KAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDK

Query:  AVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPIT
        ++I+ ++ KG      + F   +FWV  H+ P++C+NR+    +A  IG  V++  +++E   WG+ +RVKV +++SKPLRR   LK+G   +   + + 
Subjt:  AVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPIT

Query:  IEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEE--GTQYGPWMR
         E+LP+FCY CGR+GH +++C + D  +   E   T+YG W++
Subjt:  IEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEE--GTQYGPWMR

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.2e-3934.41Show/hide
Query:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW
        M+ E  + +  K KLT +E    ++V+ + +++ ++ +  + V K+LA + I A+   R++   W VE ++ ++  GKN+++  F  +    RV++ GPW
Subjt:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW

Query:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW
         +DKA+I+  +   +K I  +EF  V+FW+H  +LP+  LN+   + L N+IG FV ++   E+G  WG +LR++V ++++KPLRRG  + +       W
Subjt:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW

Query:  IPITIEKLPDFCYQCGRLGHVMIDCEEE--DTEEDDEEGTQYGPWMR
        IPI  E+LPDFCY CG +GH   DC+      ++D    ++YGPW+R
Subjt:  IPITIEKLPDFCYQCGRLGHVMIDCEEE--DTEEDDEEGTQYGPWMR

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein3.8e-3933.61Show/hide
Query:  EKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYD
        E  I +L +    EDE   + E+ ++ I+  D+D++   V K+L  K +  E F+ LI +IW   G+V+++  G+N ++  F +K+ + +V   GPW++ 
Subjt:  EKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYD

Query:  KAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPI
        K++I+ ++ KG   I  ++F    FWV  H++P++C+N++    LA  IG  V++  E+ E   WG+ +RVKV+++++KPL+R   +K+G   +   + +
Subjt:  KAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPI

Query:  TIEKLPDFCYQCGRLGHVMIDCEEEDTEED--DEEGTQYGPWMR
          E+LPDFC+ CGR+GH + +C +ED +    D + T++G WMR
Subjt:  TIEKLPDFCYQCGRLGHVMIDCEEEDTEED--DEEGTQYGPWMR

A0A5C7H9Y2 CCHC-type domain-containing protein1.6e-3733.06Show/hide
Query:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW
        ME +   ++  K+ L +D+ G +  ++ +  E  ++ +  + + K +  K I  E F+  I  IW  + +V M+  G NI+  +F++   +KR++EGGPW
Subjt:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW

Query:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW
        ++DK +++  E  G++ +  ++FRYV FW+  HNLP+ CLNR+ G+ L   +G  VK  +  E G+  G+ +R++V ++V  PL+RG  + +G       
Subjt:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW

Query:  IPITIEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEEGTQYGPWMR
        + I  E+LP+FCY CG++GH++ DC     E       ++GPWMR
Subjt:  IPITIEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEEGTQYGPWMR

A0A5C7IU01 CCHC-type domain-containing protein6.8e-3634.68Show/hide
Query:  IKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDKAV
        I++L K     DE G ++E+ +  +    +DI+   V K+L  K I  E F+ LI +IW   G+V+++  G N+++  F ++  + RV   GPW +  ++
Subjt:  IKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDKAV

Query:  ILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPITIE
        I  ++  G   + ++EF    FW+  H++P++C+NR+    LA  IG  V++  E+ E   WG  LRVKVR+++SKPL+R   LK+G+  + + + +  E
Subjt:  ILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPITIE

Query:  KLPDFCYQCGRLGHVMIDCEEE
        +LP+FCY CGR+GH + +C +E
Subjt:  KLPDFCYQCGRLGHVMIDCEEE

A0A5C7IW83 CCHC-type domain-containing protein6.1e-3733.33Show/hide
Query:  KAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDK
        K I +L +     +E G ++E  + +IE   KD++   V K+L  K +  E F+ LI +IW   G+V+++    NI++  F  ++ + RV + GPW + K
Subjt:  KAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDK

Query:  AVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPIT
        ++I+ ++ KG      + F   +FWV  H+ P++C+NR+    +A  IG  V++  +++E   WG+ +RVKV +++SKPLRR   LK+G   +   + + 
Subjt:  AVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPIT

Query:  IEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEE--GTQYGPWMR
         E+LP+FCY CGR+GH +++C + D  +   E   T+YG W++
Subjt:  IEKLPDFCYQCGRLGHVMIDCEEEDTEEDDEE--GTQYGPWMR

A0A6J1DU55 uncharacterized protein LOC1110231355.9e-4034.41Show/hide
Query:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW
        M+ E  + +  K KLT +E    ++V+ + +++ ++ +  + V K+LA + I A+   R++   W VE ++ ++  GKN+++  F  +    RV++ GPW
Subjt:  MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPW

Query:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW
         +DKA+I+  +   +K I  +EF  V+FW+H  +LP+  LN+   + L N+IG FV ++   E+G  WG +LR++V ++++KPLRRG  + +       W
Subjt:  IYDKAVILFDELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVW

Query:  IPITIEKLPDFCYQCGRLGHVMIDCEEE--DTEEDDEEGTQYGPWMR
        IPI  E+LPDFCY CG +GH   DC+      ++D    ++YGPW+R
Subjt:  IPITIEKLPDFCYQCGRLGHVMIDCEEE--DTEEDDEEGTQYGPWMR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G36228.1 nucleic acid binding;zinc ion binding2.8e-1025Show/hide
Query:  KILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDKAVILFDELKGNKGIKSVEF-RYVSFWVHFHNLPVVCLNRK
        +IL P++   E     +P  WG+  +V  +      +  +F+S+      +   PW++++    F  L+  +   + +F  ++  WVH   +P+  ++ +
Subjt:  KILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDKAVILFDELKGNKGIKSVEF-RYVSFWVHFHNLPVVCLNRK

Query:  YGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPITIEKLPDFCYQCGRLGHVMIDC------EEEDTEED
            +A+++G  V M+   EE       +RVKVRM+ ++PLR    ++  S  +   I    EKL   C  C R+ H +  C      EE D E D
Subjt:  YGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPITIEKLPDFCYQCGRLGHVMIDC------EEEDTEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGAGAAAGCTATCAAAGAACTAAGTAAGATGAAACTGACCGAGGACGAGAAAGGAGGGCTGGTGGAGGTGGAAGATAACGACATTGAAGTTACGGACAAGGA
TATTGAAAACACAGCAGTATGCAAAATCCTAGCACCAAAGAGTATTATAGCCGAACACTTCCAACGCCTTATACCAAAAATATGGGGTGTAGAAGGGAAAGTTCAGATGA
AGAAGACAGGAAAGAATATATACGTATGCAAATTTAAAAGTAAAAAGGCGAAAAAAAGAGTAATAGAAGGGGGACCATGGATATACGATAAAGCAGTCATCCTCTTCGAT
GAGCTGAAAGGGAACAAAGGAATCAAGTCAGTGGAATTCAGGTATGTATCTTTTTGGGTTCATTTTCATAACCTGCCTGTTGTCTGTTTGAATAGGAAATACGGTATGGC
CCTCGCAAACTCGATAGGAACCTTTGTGAAAATGGAGGAGGAAGCAGAGGAAGGTAAAGTGTGGGGTGAAACCTTAAGAGTGAAAGTGCGAATGGAGGTCAGTAAACCGC
TAAGGCGAGGCACAAATCTAAAGGTTGGTTCTATGGCGGACGAAGTATGGATCCCAATAACCATAGAGAAGTTGCCGGATTTCTGCTACCAGTGTGGACGTTTGGGCCAT
GTGATGATCGACTGTGAGGAGGAGGATACTGAAGAAGACGACGAGGAGGGTACTCAGTATGGGCCCTGGATGAGAGAGTCTTTCAACGCAAACCCAACAACAAAAATCAG
AAAAATACAGCAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGAGAAAGCTATCAAAGAACTAAGTAAGATGAAACTGACCGAGGACGAGAAAGGAGGGCTGGTGGAGGTGGAAGATAACGACATTGAAGTTACGGACAAGGA
TATTGAAAACACAGCAGTATGCAAAATCCTAGCACCAAAGAGTATTATAGCCGAACACTTCCAACGCCTTATACCAAAAATATGGGGTGTAGAAGGGAAAGTTCAGATGA
AGAAGACAGGAAAGAATATATACGTATGCAAATTTAAAAGTAAAAAGGCGAAAAAAAGAGTAATAGAAGGGGGACCATGGATATACGATAAAGCAGTCATCCTCTTCGAT
GAGCTGAAAGGGAACAAAGGAATCAAGTCAGTGGAATTCAGGTATGTATCTTTTTGGGTTCATTTTCATAACCTGCCTGTTGTCTGTTTGAATAGGAAATACGGTATGGC
CCTCGCAAACTCGATAGGAACCTTTGTGAAAATGGAGGAGGAAGCAGAGGAAGGTAAAGTGTGGGGTGAAACCTTAAGAGTGAAAGTGCGAATGGAGGTCAGTAAACCGC
TAAGGCGAGGCACAAATCTAAAGGTTGGTTCTATGGCGGACGAAGTATGGATCCCAATAACCATAGAGAAGTTGCCGGATTTCTGCTACCAGTGTGGACGTTTGGGCCAT
GTGATGATCGACTGTGAGGAGGAGGATACTGAAGAAGACGACGAGGAGGGTACTCAGTATGGGCCCTGGATGAGAGAGTCTTTCAACGCAAACCCAACAACAAAAATCAG
AAAAATACAGCAAAACTAA
Protein sequenceShow/hide protein sequence
MEEEKAIKELSKMKLTEDEKGGLVEVEDNDIEVTDKDIENTAVCKILAPKSIIAEHFQRLIPKIWGVEGKVQMKKTGKNIYVCKFKSKKAKKRVIEGGPWIYDKAVILFD
ELKGNKGIKSVEFRYVSFWVHFHNLPVVCLNRKYGMALANSIGTFVKMEEEAEEGKVWGETLRVKVRMEVSKPLRRGTNLKVGSMADEVWIPITIEKLPDFCYQCGRLGH
VMIDCEEEDTEEDDEEGTQYGPWMRESFNANPTTKIRKIQQN