| GenBank top hits | e value | %identity | Alignment |
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| KAA0032121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 2.8e-50 | 45.54 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSK----
ERQKK+Y F DSD+ DMLEQL+E QL+ LP+CK+PE++ KVDD RV+ H VE+CFVLK+LI KLA+E KIE D+DEVAQ+N + S
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSK----
Query: ----HQRK-------------KDPKKLQPKRKKSKKSTQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFN
QRK + +K ++K+ + E ++F + E + Y EE+DN +QRTSVF+
Subjt: ----HQRK-------------KDPKKLQPKRKKSKKSTQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFN
Query: RIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSV
IKP TTR SVFQR+SM K+E+NQC T A+ SAF+RLS+S SKK R ST FD LK+T+DQ +R+M L+ K F E N+D K HS + SRMKRK SV
Subjt: RIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSV
Query: LINTKGSLKVLTRF
INT+GSL V RF
Subjt: LINTKGSLKVLTRF
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| KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 1.5e-51 | 41.38 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
ERQKK+Y F DSD+ DMLEQL+E QL+ LPKCK+PE+ KVDD RV+ H VE+CFVLK+LILKL +E KIE D+DEVAQ+N
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
Query: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
I + K +R K K +P + K +
Subjt: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
Query: TQPQQLVMLNETFSKTF---HKKEKENFATSY----------YIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
QP+Q + L E F ++F H KE + Y EEVDN +QRTSVF+RIKP TTR SVFQR+S+ KEE+NQC ST R SAF
Subjt: TQPQQLVMLNETFSKTF---HKKEKENFATSY----------YIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
Query: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
+ LS+STSKK R STS FD LK+ +DQ +R+M +L+VK F E N+D K HS + SRMKRK SV INT+GSL V RF
Subjt: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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| KAA0055462.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.8e-50 | 40.58 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
ERQKK+Y F DSD+ DMLEQL++ QL+ L +CK+PE+ KVDD V+ H VE+CFVLK+LILKLA+E KIE D+DEVAQ+N
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
Query: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
I + K +R K K +P + K +
Subjt: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
Query: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
QP++ + L E S++F + E + Y EEVDN +QRTSVF+RIKP TTR SVFQR+SM KEEKNQC ST AR SAF
Subjt: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
Query: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
+RLS+STSKK R STS FD LK+T+DQ +R+M +L+ K F E N+D K H+ + SRMKRK SV INT+GSL V RF
Subjt: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-52 | 49.65 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSKHQRK
ERQ+K+Y F DSD+ DMLEQL+E QL+ LP+CK+PE+ KVDD RV+ HPVE+CFVLK+LILKLA+E KIE D+DEVAQ+N A I+ S +
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSKHQRK
Query: KDPKKLQPKRK--------KSKKSTQPQQLVMLNETFSKTFHKKEKENFATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQC
KD LQ +R +S P++++ + + + + + N+ +S +EV+N QRTSVF+RIKPSTTR SVFQR+S+ KEE+NQC
Subjt: KDPKKLQPKRK--------KSKKSTQPQQLVMLNETFSKTFHKKEKENFATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQC
Query: SVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
R S +RLS+ST KK R STS FD LK+T+DQ +R+M + + K F E N+D K HS + SRMKRK V INT+GSL V RF
Subjt: SVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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| TYK08944.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.8e-50 | 40.58 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
ERQKK+Y F DSD+ DMLEQL++ QL+ L +CK+PE+ KVDD V+ H VE+CFVLK+LILKLA+E KIE D+DEVAQ+N
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
Query: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
I + K +R K K +P + K +
Subjt: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
Query: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
QP++ + L E S++F + E + Y EEVDN +QRTSVF+RIKP TTR SVFQR+SM KEEKNQC ST AR SAF
Subjt: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
Query: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
+RLS+STSKK R STS FD LK+T+DQ +R+M +L+ K F E N+D K H+ + SRMKRK SV INT+GSL V RF
Subjt: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SRE2 Ty3-gypsy retrotransposon protein | 1.4e-50 | 45.54 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSK----
ERQKK+Y F DSD+ DMLEQL+E QL+ LP+CK+PE++ KVDD RV+ H VE+CFVLK+LI KLA+E KIE D+DEVAQ+N + S
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSK----
Query: ----HQRK-------------KDPKKLQPKRKKSKKSTQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFN
QRK + +K ++K+ + E ++F + E + Y EE+DN +QRTSVF+
Subjt: ----HQRK-------------KDPKKLQPKRKKSKKSTQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFN
Query: RIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSV
IKP TTR SVFQR+SM K+E+NQC T A+ SAF+RLS+S SKK R ST FD LK+T+DQ +R+M L+ K F E N+D K HS + SRMKRK SV
Subjt: RIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSV
Query: LINTKGSLKVLTRF
INT+GSL V RF
Subjt: LINTKGSLKVLTRF
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| A0A5A7TGM1 Retrotransposon gag protein | 7.3e-52 | 41.38 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
ERQKK+Y F DSD+ DMLEQL+E QL+ LPKCK+PE+ KVDD RV+ H VE+CFVLK+LILKL +E KIE D+DEVAQ+N
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
Query: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
I + K +R K K +P + K +
Subjt: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
Query: TQPQQLVMLNETFSKTF---HKKEKENFATSY----------YIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
QP+Q + L E F ++F H KE + Y EEVDN +QRTSVF+RIKP TTR SVFQR+S+ KEE+NQC ST R SAF
Subjt: TQPQQLVMLNETFSKTF---HKKEKENFATSY----------YIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
Query: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
+ LS+STSKK R STS FD LK+ +DQ +R+M +L+VK F E N+D K HS + SRMKRK SV INT+GSL V RF
Subjt: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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| A0A5A7UI09 Retrotransposon gag protein | 1.4e-50 | 40.58 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
ERQKK+Y F DSD+ DMLEQL++ QL+ L +CK+PE+ KVDD V+ H VE+CFVLK+LILKLA+E KIE D+DEVAQ+N
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
Query: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
I + K +R K K +P + K +
Subjt: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
Query: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
QP++ + L E S++F + E + Y EEVDN +QRTSVF+RIKP TTR SVFQR+SM KEEKNQC ST AR SAF
Subjt: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
Query: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
+RLS+STSKK R STS FD LK+T+DQ +R+M +L+ K F E N+D K H+ + SRMKRK SV INT+GSL V RF
Subjt: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 1.9e-52 | 49.65 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSKHQRK
ERQ+K+Y F DSD+ DMLEQL+E QL+ LP+CK+PE+ KVDD RV+ HPVE+CFVLK+LILKLA+E KIE D+DEVAQ+N A I+ S +
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDD-------RVVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSNLATIKERSKHQRK
Query: KDPKKLQPKRK--------KSKKSTQPQQLVMLNETFSKTFHKKEKENFATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQC
KD LQ +R +S P++++ + + + + + N+ +S +EV+N QRTSVF+RIKPSTTR SVFQR+S+ KEE+NQC
Subjt: KDPKKLQPKRK--------KSKKSTQPQQLVMLNETFSKTFHKKEKENFATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQC
Query: SVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
R S +RLS+ST KK R STS FD LK+T+DQ +R+M + + K F E N+D K HS + SRMKRK V INT+GSL V RF
Subjt: SVSTSARPSAFQRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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| A0A5D3CCI8 Retrotransposon gag protein | 1.4e-50 | 40.58 | Show/hide |
Query: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
ERQKK+Y F DSD+ DMLEQL++ QL+ L +CK+PE+ KVDD V+ H VE+CFVLK+LILKLA+E KIE D+DEVAQ+N
Subjt: ERQKKIYHFLDSDIPDMLEQLMEAQLMGLPKCKQPEEMEKVDDR-------VVGHPVERCFVLKDLILKLAKEGKIEFDLDEVAQSN-------------
Query: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
I + K +R K K +P + K +
Subjt: -----------------------------------------------------------------------LATIKERSKHQRKKDPKKLQPKRKKSKKS
Query: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
QP++ + L E S++F + E + Y EEVDN +QRTSVF+RIKP TTR SVFQR+SM KEEKNQC ST AR SAF
Subjt: TQPQQLVMLNETFSKTFHKKEKENF-------------ATSYYIDVEEVDNFENGEQRTSVFNRIKPSTTRPSVFQRMSMVAKEEKNQCSVSTSARPSAF
Query: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
+RLS+STSKK R STS FD LK+T+DQ +R+M +L+ K F E N+D K H+ + SRMKRK SV INT+GSL V RF
Subjt: QRLSVSTSKKSRLSTSVFDCLKVTSDQPKRKMDNLEVKLFDEVNNDKKFHSSISSRMKRKFSVLINTKGSLKVLTRF
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