; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000589 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000589
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionreplication protein A 70 kDa DNA-binding subunit E-like
Genome locationchr4:10846172..10862985
RNA-Seq ExpressionLag0000589
SyntenyLag0000589
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155232.1 replication protein A 70 kDa DNA-binding subunit E-like [Momordica charantia]1.9e-1032.08Show/hide
Query:  GVCIQVTLFNEVIDKFNEKLEKGKLYLIYGGTIKPIDIRF------------------------------------------------------------
        GVCIQV LFN++I+KF + LEKGK Y I  G IKPID+R+                                                            
Subjt:  GVCIQVTLFNEVIDKFNEKLEKGKLYLIYGGTIKPIDIRF------------------------------------------------------------

Query:  -------------------NTMKLTLWDDLAENKGQHLKDNCAKHNVIIITNVKSTQYE
                           NT+KLTLWDDLAEN+GQ+L++N     VI+ITNV+  Q+E
Subjt:  -------------------NTMKLTLWDDLAENKGQHLKDNCAKHNVIIITNVKSTQYE
TrEMBL top hitse value%identityAlignment
A0A6J1DNS8 replication protein A 70 kDa DNA-binding subunit E-like9.0e-1132.08Show/hide
Query:  GVCIQVTLFNEVIDKFNEKLEKGKLYLIYGGTIKPIDIRF------------------------------------------------------------
        GVCIQV LFN++I+KF + LEKGK Y I  G IKPID+R+                                                            
Subjt:  GVCIQVTLFNEVIDKFNEKLEKGKLYLIYGGTIKPIDIRF------------------------------------------------------------

Query:  -------------------NTMKLTLWDDLAENKGQHLKDNCAKHNVIIITNVKSTQYE
                           NT+KLTLWDDLAEN+GQ+L++N     VI+ITNV+  Q+E
Subjt:  -------------------NTMKLTLWDDLAENKGQHLKDNCAKHNVIIITNVKSTQYE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTGGCGACTCCAAACCTCTCACCTCGAAAGAGACCCTTAGGAAAGGACGTCGGCCGCTCCGCGTCGCGATGACGTTGCGACAAAGTATATTGTTTATTCCACA
TGTCTCCATCTTCGAAGTTACGTGTGAACACCTGGGAGTATGTATTCAGGTTACTTTGTTTAATGAGGTGATTGACAAATTCAATGAAAAACTTGAAAAGGGAAAATTAT
ATCTCATCTATGGCGGTACCATAAAACCAATAGATATAAGGTTCAATACGATGAAGCTTACACTATGGGACGATTTAGCTGAAAATAAAGGACAACATTTGAAGGACAAT
TGTGCAAAACATAATGTAATAATCATCACAAATGTCAAATCTACACAATATGAAGAATGTATTGCTGAGCGACAGGAGGGAGCAAAATCTGTGCTGGAGCAAAGCTTGGA
GCAAAACTGCCACTTCACAGCTTGTCTATTAGGTCCCACCGGTAGCTCTATAAGGGCGTTGAGGCTAACTAACAAAGCAACTAAGAAAGATAGAACAAGAAAGGACTCAG
TGCCTAGGAATTTTCCTCATAGTCATCCTCCTCGCCACCAAGGTCCGAATCATCCTCGATACCTGCAACATCTAAAATGTTGGGGGGAAAGGTGGGGAAGTGGGTATCAG
TACAACCGCGGTACTGGACCCCCCTTTCTTCGTGTGTTTCTTCTCCAACGCCAGCCGCAGGTCTTCATCTCCCTCTCGCGTGTTGCGCCGTCGCCAGTAGCCAAGCCCCG
TTGGCTTTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCCGGTTGTAGTAGGTCCCTCTTCGCGTGAGCAGCCGCGGTTCCCGTCGTCGATCTCTCTCTCTTTCGTTCTTC
CTCGCGTTGAAGCCGTCGGTGTCAAGACCCACGGACAGCAGCAACTTGCGCCATCGTTCGTCTCCCTCGAGCTTGAGCCGTTCTCCTCGCGTGTAAGTGAGCAGAAGGCA
AGATCTCTGTTGTTCCTGCGGTTTGGGCACGTTTGGGCTGACTTAAGTTCCGTTCCAGCGTGTTCGAGCTCTCTTGGAAGCACGTATTCAAAGGAGCCTGGCGTTGCTTG
GGATCAATTAAAGCTTACTTGGGTTGTTTCCAACAAGGAACTTCATTCTGTTTGGTGGAGCTTAGAAGGGACGATGCACAGTTTGAGGCCTTGGGTACAAATGGTCAAGG
GTCGAACGTCGAGCTCCGTAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATCAGTCTTGGAGGGCTATGTGAGAGCTAAATATGAG
CGTGGAGTGAGCTCGTGGAGCTTGAGTGGGGCTGCTTACCAGTACCTTAGTGTACTTGCCACCTCCCCTCTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGAGGAC
TGCGTGGACCATGGTGATGCGGATGAGGCTTACGAGGAGGGACCGTGCTGTCCAGGGTTCGGGATCACATGAAACTGACACGAAAAGGCACCCAAGGATTAGAAATTGCA
CTAAAGCCAACCACAAGTTCGAAGGTTTTCATGCGCTTTGTTGCAGTTCCTTCTCTCCAAGTTCAAAAGGTTCTCACGCATTCGACTACAGTTCATTTCCTCCAAATTTG
AAGGTGTTCTCACGCGCGCCACTGCAGTTCCTTCTCTCCAAGTTCGAAGGTGTTCTCGCGCACTTTGCTGCCGTTCCTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCT
TCGTTGCAGTTCCTTCCTCCCAAATTTGAAGGTTCTCACGACGCTCCGCTGCAGTTCCTTATCTCTCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTTGCT
TTCGTTGCAATTCCTTCTCTCCGAGTTCGAAGGTTCTCACGACGTTTCGTTGCAGTTCCTTCCTCCCAAATTCGAAGGTTCTCAAGACGCTCCGCTGTAGTTCCTTCTCT
CCAAATTTGAAGGTGTTCTCACGCGCGCCGCTGCAGTTCCATCTCTCCAAGTTCGAAGGTGTTATCGCGCGCTTCGCTGCAGTTCCTTCCTCCCAAATTCGAAGGTTCTC
TCATGCGCTTCGTTACAGTTCATTCTCTCCAAGTATGAAGGTTCTCTCCTCCAAGTTGAAGGTTCTCACGTTGCTTCACTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCT
CACGTTGCTTCGTCGTAGTTCCTTCTCTCCAAGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCCAAATTCGAAGGTTTTCTTACGCGCTTCGCTACAGTTCCTTCC
TCAAAGTTCGAAGGTTCTCACGCGTTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAATTCGAAGGTTTCAAAGG
CTCTCACGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGTTTCACTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCATGCGTTGCTGCAG
TTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTC
CGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGA
AGGCGCTTCTCTCCACTGTTCCTTCTCCAAGTTCGAAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCG
TTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGTAGGAGTGCATGAAGGCGAATCTGGTGACTACCCC
TGCAGAATATTTCAACCAATTGAAGAGGAGGAGAAAATCATCGTGCCCGTAAACAGATCGTGGTTCAAGAAATTTGAAGTGTCGAATCAATGGCAAAAAAGAAACATGGA
AGAAATCAGAGTGAAAGCAATGATGAAAAGAATCAGAGTGAAGGAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAAGAGTCCAGAGTCGGCAG
GCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAAC
AAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAA
GAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCAATGAGCCGATCCAAGAGATCATCAAGCCAAC
AGGCCGATCTAAGAGATCATCAACCTAGCAAGTTGATCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTGGCGACTCCAAACCTCTCACCTCGAAAGAGACCCTTAGGAAAGGACGTCGGCCGCTCCGCGTCGCGATGACGTTGCGACAAAGTATATTGTTTATTCCACA
TGTCTCCATCTTCGAAGTTACGTGTGAACACCTGGGAGTATGTATTCAGGTTACTTTGTTTAATGAGGTGATTGACAAATTCAATGAAAAACTTGAAAAGGGAAAATTAT
ATCTCATCTATGGCGGTACCATAAAACCAATAGATATAAGGTTCAATACGATGAAGCTTACACTATGGGACGATTTAGCTGAAAATAAAGGACAACATTTGAAGGACAAT
TGTGCAAAACATAATGTAATAATCATCACAAATGTCAAATCTACACAATATGAAGAATGTATTGCTGAGCGACAGGAGGGAGCAAAATCTGTGCTGGAGCAAAGCTTGGA
GCAAAACTGCCACTTCACAGCTTGTCTATTAGGTCCCACCGGTAGCTCTATAAGGGCGTTGAGGCTAACTAACAAAGCAACTAAGAAAGATAGAACAAGAAAGGACTCAG
TGCCTAGGAATTTTCCTCATAGTCATCCTCCTCGCCACCAAGGTCCGAATCATCCTCGATACCTGCAACATCTAAAATGTTGGGGGGAAAGGTGGGGAAGTGGGTATCAG
TACAACCGCGGTACTGGACCCCCCTTTCTTCGTGTGTTTCTTCTCCAACGCCAGCCGCAGGTCTTCATCTCCCTCTCGCGTGTTGCGCCGTCGCCAGTAGCCAAGCCCCG
TTGGCTTTCTTCATCTCTTCCTCCCTCGCGTGTTGTTCCGGTTGTAGTAGGTCCCTCTTCGCGTGAGCAGCCGCGGTTCCCGTCGTCGATCTCTCTCTCTTTCGTTCTTC
CTCGCGTTGAAGCCGTCGGTGTCAAGACCCACGGACAGCAGCAACTTGCGCCATCGTTCGTCTCCCTCGAGCTTGAGCCGTTCTCCTCGCGTGTAAGTGAGCAGAAGGCA
AGATCTCTGTTGTTCCTGCGGTTTGGGCACGTTTGGGCTGACTTAAGTTCCGTTCCAGCGTGTTCGAGCTCTCTTGGAAGCACGTATTCAAAGGAGCCTGGCGTTGCTTG
GGATCAATTAAAGCTTACTTGGGTTGTTTCCAACAAGGAACTTCATTCTGTTTGGTGGAGCTTAGAAGGGACGATGCACAGTTTGAGGCCTTGGGTACAAATGGTCAAGG
GTCGAACGTCGAGCTCCGTAGAGAGCATTGTGGCCCTGGGTACAAATGGTCAGGGGACAGTGCGACTCGAAGGATCAGTCTTGGAGGGCTATGTGAGAGCTAAATATGAG
CGTGGAGTGAGCTCGTGGAGCTTGAGTGGGGCTGCTTACCAGTACCTTAGTGTACTTGCCACCTCCCCTCTCTCTCCCCCCAACTACCAGATTTTGCAGGTTATGAGGAC
TGCGTGGACCATGGTGATGCGGATGAGGCTTACGAGGAGGGACCGTGCTGTCCAGGGTTCGGGATCACATGAAACTGACACGAAAAGGCACCCAAGGATTAGAAATTGCA
CTAAAGCCAACCACAAGTTCGAAGGTTTTCATGCGCTTTGTTGCAGTTCCTTCTCTCCAAGTTCAAAAGGTTCTCACGCATTCGACTACAGTTCATTTCCTCCAAATTTG
AAGGTGTTCTCACGCGCGCCACTGCAGTTCCTTCTCTCCAAGTTCGAAGGTGTTCTCGCGCACTTTGCTGCCGTTCCTTCCTCCCAAATTCGAAGGTTCTCTCACGCGCT
TCGTTGCAGTTCCTTCCTCCCAAATTTGAAGGTTCTCACGACGCTCCGCTGCAGTTCCTTATCTCTCCAAATTCGAAGGTTCTCACGCGCTCCGCTGCAGTTCCTTTGCT
TTCGTTGCAATTCCTTCTCTCCGAGTTCGAAGGTTCTCACGACGTTTCGTTGCAGTTCCTTCCTCCCAAATTCGAAGGTTCTCAAGACGCTCCGCTGTAGTTCCTTCTCT
CCAAATTTGAAGGTGTTCTCACGCGCGCCGCTGCAGTTCCATCTCTCCAAGTTCGAAGGTGTTATCGCGCGCTTCGCTGCAGTTCCTTCCTCCCAAATTCGAAGGTTCTC
TCATGCGCTTCGTTACAGTTCATTCTCTCCAAGTATGAAGGTTCTCTCCTCCAAGTTGAAGGTTCTCACGTTGCTTCACTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCT
CACGTTGCTTCGTCGTAGTTCCTTCTCTCCAAGTTCTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCCAAATTCGAAGGTTTTCTTACGCGCTTCGCTACAGTTCCTTCC
TCAAAGTTCGAAGGTTCTCACGCGTTTCGCTGCAGTTTCTTCTCCCTAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAATTCGAAGGTTTCAAAGG
CTCTCACGCGCTGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCATGCGTTTCACTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCATGCGTTGCTGCAG
TTCCTTCCTCCAAGTTCGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTCCACTGCTCCTTCTCCAAGTTCGAAGGCGCTTCTCTC
CGTTGCTACCTTCCTCCAAGTTCGAAGGTTCTCTCACGCGCTGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCCCTCACGCGCTTCGCTCGCTCCTTCTCCAAGTTCGA
AGGCGCTTCTCTCCACTGTTCCTTCTCCAAGTTCGAAGGAAACTACAGTCATCAAAGTGACTGGTCTAGACAGGTGGTGAAGTCACTGCAATTGAATCTGATGACGACCG
TTGTAGGCGAGTCGGGTCTGGTGACCACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGTAGGAGTGCATGAAGGCGAATCTGGTGACTACCCC
TGCAGAATATTTCAACCAATTGAAGAGGAGGAGAAAATCATCGTGCCCGTAAACAGATCGTGGTTCAAGAAATTTGAAGTGTCGAATCAATGGCAAAAAAGAAACATGGA
AGAAATCAGAGTGAAAGCAATGATGAAAAGAATCAGAGTGAAGGAGATTTGGAGACAGAGTCAGAGAACTCAGAGTCCAGAGCATTCTGCCAAGAGTCCAGAGTCGGCAG
GCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAAGAAGATCAAC
AAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCAACAAGCCAACCGACCGATCAA
GAAGATCAACAAGTCCAATAGGTCGATCCAGGAGATCATCAACCTAACAGACCGATCATCCAAGAAGATCAACAAGCCAATGAGCCGATCCAAGAGATCATCAAGCCAAC
AGGCCGATCTAAGAGATCATCAACCTAGCAAGTTGATCATCTAA
Protein sequenceShow/hide protein sequence
MIGGDSKPLTSKETLRKGRRPLRVAMTLRQSILFIPHVSIFEVTCEHLGVCIQVTLFNEVIDKFNEKLEKGKLYLIYGGTIKPIDIRFNTMKLTLWDDLAENKGQHLKDN
CAKHNVIIITNVKSTQYEECIAERQEGAKSVLEQSLEQNCHFTACLLGPTGSSIRALRLTNKATKKDRTRKDSVPRNFPHSHPPRHQGPNHPRYLQHLKCWGERWGSGYQ
YNRGTGPPFLRVFLLQRQPQVFISLSRVAPSPVAKPRWLSSSLPPSRVVPVVVGPSSREQPRFPSSISLSFVLPRVEAVGVKTHGQQQLAPSFVSLELEPFSSRVSEQKA
RSLLFLRFGHVWADLSSVPACSSSLGSTYSKEPGVAWDQLKLTWVVSNKELHSVWWSLEGTMHSLRPWVQMVKGRTSSSVESIVALGTNGQGTVRLEGSVLEGYVRAKYE
RGVSSWSLSGAAYQYLSVLATSPLSPPNYQILQVMRTAWTMVMRMRLTRRDRAVQGSGSHETDTKRHPRIRNCTKANHKFEGFHALCCSSFSPSSKGSHAFDYSSFPPNL
KVFSRAPLQFLLSKFEGVLAHFAAVPSSQIRRFSHALRCSSFLPNLKVLTTLRCSSLSLQIRRFSRAPLQFLCFRCNSFSPSSKVLTTFRCSSFLPNSKVLKTLRCSSFS
PNLKVFSRAPLQFHLSKFEGVIARFAAVPSSQIRRFSHALRYSSFSPSMKVLSSKLKVLTLLHCSSFLQVRRFSRCFVVVPSLQVLSRASLQFLPPKFEGFLTRFATVPS
SKFEGSHAFRCSFFSLSSKVLTRFAAVPSPKFEGFKGSHALRFVAVPSSKFEGSHAFHCYLPPSSKVLSCVAAVPSSKFEGSLTRFARSFSKFEGASLHCSFSKFEGASL
RCYLPPSSKVLSRAAAVPSSKFEGSLTRFARSFSKFEGASLHCSFSKFEGNYSHQSDWSRQVVKSLQLNLMTTVVGESGLVTTPAGYSDHPIKWGLGLVGVHEGESGDYP
CRIFQPIEEEEKIIVPVNRSWFKKFEVSNQWQKRNMEEIRVKAMMKRIRVKEIWRQSQRTQSPEHSAKSPESAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKIN
KSAGRSSKRINKLTSRSNRSSSQQADPRDQQANRPIKKINKSNRSIQEIINLTDRSSKKINKPMSRSKRSSSQQADLRDHQPSKLII