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Lag0000593 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000593
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:10942230..10942541
RNA-Seq ExpressionLag0000593
SyntenyLag0000593
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG63522.1 hypothetical protein EZV62_010516 [Acer yangbiense]6.3e-2452.94Show/hide
Query:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEE
        ++  L +E GF V S G SGGLLLLW+N   V + SYS GHID  I E+ G+ WRF+G+YG+PN      TWTLM+RL +  N+PW+ GGDFNE+ S+ E
Subjt:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEE

Query:  KM
        K+
Subjt:  KM

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]5.9e-2253Show/hide
Query:  KRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGMWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKM
        KR L+F+    V S G SGGL+LLW +D +V ++S S GHID II +  G WRFTG YGNP       +W L++RL    ++PWIIGGDFNEI S+ EKM
Subjt:  KRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGMWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKM

XP_023871998.1 uncharacterized protein LOC111984613 [Quercus suber]9.1e-2348.04Show/hide
Query:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEG--MWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLE
        +K  L    G VVPS+  SGGL+LLW+ ++ V+++SYS+ HID I+ +N+G   WRFTG YGNP+     E+W L+KRL+ N ++PW+  GDFNE+    
Subjt:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEG--MWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLE

Query:  EK
        EK
Subjt:  EK

XP_023903659.1 uncharacterized protein LOC112015491 [Quercus suber]9.1e-2348.04Show/hide
Query:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEG--MWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLE
        +K  L    G VVPS+  SGGL+LLW+ ++ V+++SYS+ HID I+ +N+G   WRFTG YGNP+     E+W L+KRL+ N ++PW+  GDFNE+    
Subjt:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEG--MWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLE

Query:  EK
        EK
Subjt:  EK

XP_024021734.1 uncharacterized protein LOC112091706 [Morus notabilis]7.7e-2247.52Show/hide
Query:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEE
        +KR   F  GF V   G SGGL+L+W+ +++V ++SYS+ HID  ++   G+ WRFTG YGNP+R   H +WTL+ RL   +N+PW++ GDFNEI  L +
Subjt:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEE

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A2N9I611 Uncharacterized protein1.4e-2149.49Show/hide
Query:  LNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGMWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKMEV
        L ++  FVVPS G SGGL LLW  D+D+++ SY++ HID  IK  EG+WRFTG YG+P       +W L+K L + + +PW+  GDFNEI S +EK  V
Subjt:  LNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGMWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKMEV

A0A2P5FJW8 Endonuclease/exonuclease/phosphatase (Fragment)7.0e-2153.19Show/hide
Query:  GFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKME
        GFVV SVG SGGLLLLWQ+  DV++RSYS+G+ID II    G+ WRF G YG+P  +    +W L ++L+   ++PW+ GGDFNEI S  EK++
Subjt:  GFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKME

A0A5C7H9Y2 CCHC-type domain-containing protein8.3e-2251.65Show/hide
Query:  FVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEK
        F V  +G  GGL LLW+NDI+V++RS++KGHID +IK+++ + WRFTG YG P       +W+L++RL   +N+PWI+ GDFNEI  L+EK
Subjt:  FVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEK

A0A5C7I4W9 RNase H domain-containing protein3.0e-2452.94Show/hide
Query:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEE
        ++  L +E GF V S G SGGLLLLW+N   V + SYS GHID  I E+ G+ WRF+G+YG+PN      TWTLM+RL +  N+PW+ GGDFNE+ S+ E
Subjt:  MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGM-WRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEE

Query:  KM
        K+
Subjt:  KM

A0A6J1DUG8 uncharacterized protein LOC1110241352.8e-2253Show/hide
Query:  KRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGMWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKM
        KR L+F+    V S G SGGL+LLW +D +V ++S S GHID II +  G WRFTG YGNP       +W L++RL    ++PWIIGGDFNEI S+ EKM
Subjt:  KRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGMWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAGCATTGAACTTTGAGTATGGCTTCGTAGTTCCTAGTGTGGGACTCAGTGGGGGGTTACTTCTTCTCTGGCAAAATGATATTGATGTTACTCTTAGATCCTA
TTCGAAAGGACACATCGATATTATTATAAAGGAGAATGAAGGGATGTGGAGATTTACAGGTGTTTATGGGAATCCAAATAGGGATCTGCATCATGAAACTTGGACGCTCA
TGAAGCGTTTAAATGATAATGCTAACATACCGTGGATTATCGGTGGAGATTTTAATGAGATTACGAGTTTGGAGGAAAAAATGGAGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAGCATTGAACTTTGAGTATGGCTTCGTAGTTCCTAGTGTGGGACTCAGTGGGGGGTTACTTCTTCTCTGGCAAAATGATATTGATGTTACTCTTAGATCCTA
TTCGAAAGGACACATCGATATTATTATAAAGGAGAATGAAGGGATGTGGAGATTTACAGGTGTTTATGGGAATCCAAATAGGGATCTGCATCATGAAACTTGGACGCTCA
TGAAGCGTTTAAATGATAATGCTAACATACCGTGGATTATCGGTGGAGATTTTAATGAGATTACGAGTTTGGAGGAAAAAATGGAGGTTTAA
Protein sequenceShow/hide protein sequence
MKRALNFEYGFVVPSVGLSGGLLLLWQNDIDVTLRSYSKGHIDIIIKENEGMWRFTGVYGNPNRDLHHETWTLMKRLNDNANIPWIIGGDFNEITSLEEKMEV