; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000599 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000599
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr4:11080553..11081101
RNA-Seq ExpressionLag0000599
SyntenyLag0000599
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY85402.1 hypothetical protein Acr_04g0001400 [Actinidia rufa]3.1e-1048.89Show/hide
Query:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF
        P PP   +  L     P P PQ  N S   + P++ QPL VKL ++N+++WK QLLN+V+ANGL  FLD S   P +FLDP Q Q NPEF
Subjt:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF

GFZ12741.1 UBX domain-containing protein [Actinidia rufa]3.1e-1048.89Show/hide
Query:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF
        P PP   +  L     P P PQ  N S   + P++ QPL VKL ++N+++WK QLLN+V+ANGL  FLD S   P +FLDP Q Q NPEF
Subjt:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF

RVW56403.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]3.7e-1151.85Show/hide
Query:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEFL
        + PQ  + P    SPN    +YP+L QPL +KL E N  LWKNQLLNV++ANGL  F++   PIP+KFLD  Q Q NP F+
Subjt:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEFL

RVX22862.1 hypothetical protein CK203_008411 [Vitis vinifera]7.7e-0950.68Show/hide
Query:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQ
        + PQ  + P    SPN    +YP+L QPL +KL E N  LWKNQL+NV++ANGL  F++   PIP+KFLD  Q
Subjt:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQ

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]5.5e-1562.16Show/hide
Query:  PQFPVPPQNFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF
        P F   P N  S N +PTLPQPL VKL +NNFLLWKNQLLN V+ANGL G+LD +I  P +FLD +Q QPNP +
Subjt:  PQFPVPPQNFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF

TrEMBL top hitse value%identityAlignment
A0A438F8X3 Retrovirus-related Pol polyprotein from transposon RE11.8e-1151.85Show/hide
Query:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEFL
        + PQ  + P    SPN    +YP+L QPL +KL E N  LWKNQLLNV++ANGL  F++   PIP+KFLD  Q Q NP F+
Subjt:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEFL

A0A438KNU0 Uncharacterized protein3.7e-0950.68Show/hide
Query:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQ
        + PQ  + P    SPN    +YP+L QPL +KL E N  LWKNQL+NV++ANGL  F++   PIP+KFLD  Q
Subjt:  VQPQFPVPPQNFSSPN----SYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQ

A0A6J1DQX7 uncharacterized protein LOC1110223152.7e-1562.16Show/hide
Query:  PQFPVPPQNFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF
        P F   P N  S N +PTLPQPL VKL +NNFLLWKNQLLN V+ANGL G+LD +I  P +FLD +Q QPNP +
Subjt:  PQFPVPPQNFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF

A0A7J0EGI5 Uncharacterized protein1.5e-1048.89Show/hide
Query:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF
        P PP   +  L     P P PQ  N S   + P++ QPL VKL ++N+++WK QLLN+V+ANGL  FLD S   P +FLDP Q Q NPEF
Subjt:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF

A0A7J0GPN0 UBX domain-containing protein1.5e-1048.89Show/hide
Query:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF
        P PP   +  L     P P PQ  N S   + P++ QPL VKL ++N+++WK QLLN+V+ANGL  FLD S   P +FLDP Q Q NPEF
Subjt:  PRPPFIGNQYLVQPQFPVP-PQ--NFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTTGAAGAAGGTTCTTCTTCTTATTCTTCAATTCCAATGGACACTACGATGGTCACTCCAAGTACTCCGATAACTACTCCGATTGTTACACCCTTTCAAAATCA
CCCTACTACCCGCACCCAAAATGCTCCTTCAATCACTTCTACTCGACCTGCAACTCCCTTCAATCCAAATGGCTTCCGTCAACCTCAATTTCACAATCAAACCTTCCCTA
ATACTCCTTTTTCATATCCACGGCCTTTTCAACCTCAATCATTCTACCCACAACAATATCCTCGTCCTCCTTTCATTGGAAACCAATATCTAGTGCAACCCCAATTTCCA
GTCCCTCCTCAAAATTTCTCCTCTCCAAACTCTTATCCCACTCTGCCACAACCTCTTGTCGTCAAACTCACAGAAAATAATTTTCTCTTATGGAAGAATCAGTTGTTAAA
TGTGGTGATGGCCAATGGGCTTTCTGGTTTTCTCGACGACTCCATTCCAATACCTTCGAAGTTTCTTGATCCCAATCAGTCTCAACCGAACCCTGAGTTTCTCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGTTTGAAGAAGGTTCTTCTTCTTATTCTTCAATTCCAATGGACACTACGATGGTCACTCCAAGTACTCCGATAACTACTCCGATTGTTACACCCTTTCAAAATCA
CCCTACTACCCGCACCCAAAATGCTCCTTCAATCACTTCTACTCGACCTGCAACTCCCTTCAATCCAAATGGCTTCCGTCAACCTCAATTTCACAATCAAACCTTCCCTA
ATACTCCTTTTTCATATCCACGGCCTTTTCAACCTCAATCATTCTACCCACAACAATATCCTCGTCCTCCTTTCATTGGAAACCAATATCTAGTGCAACCCCAATTTCCA
GTCCCTCCTCAAAATTTCTCCTCTCCAAACTCTTATCCCACTCTGCCACAACCTCTTGTCGTCAAACTCACAGAAAATAATTTTCTCTTATGGAAGAATCAGTTGTTAAA
TGTGGTGATGGCCAATGGGCTTTCTGGTTTTCTCGACGACTCCATTCCAATACCTTCGAAGTTTCTTGATCCCAATCAGTCTCAACCGAACCCTGAGTTTCTCAACTAG
Protein sequenceShow/hide protein sequence
MTFEEGSSSYSSIPMDTTMVTPSTPITTPIVTPFQNHPTTRTQNAPSITSTRPATPFNPNGFRQPQFHNQTFPNTPFSYPRPFQPQSFYPQQYPRPPFIGNQYLVQPQFP
VPPQNFSSPNSYPTLPQPLVVKLTENNFLLWKNQLLNVVMANGLSGFLDDSIPIPSKFLDPNQSQPNPEFLN