; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000614 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000614
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationchr4:11425069..11429004
RNA-Seq ExpressionLag0000614
SyntenyLag0000614
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030477929.1 uncharacterized protein LOC115694963 [Cannabis sativa]8.1e-2575.31Show/hide
Query:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        SA++ SK+PPKL+D GSFTIPC IGGR VGRALC LG+SINL P+SIFK+LGIGE RPTTV  QL+DRS A P GKIEDVL
Subjt:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

XP_030478287.1 uncharacterized protein LOC115695357 [Cannabis sativa]8.1e-2575.31Show/hide
Query:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        SA++ SK+PPKL+D GSFTIPC IGGR VGRALC LG+SINL P+SIFK+LGIGE RPTTV  QL+DRS A P GKIEDVL
Subjt:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

XP_030483376.1 uncharacterized protein LOC115699972 [Cannabis sativa]1.1e-2454.96Show/hide
Query:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVLEIELWNKLEKLEQIGCSGP
        SA++ SK+PPKL+D GSFTIPC IGGR VGRALC LG+SINL P+SIFK+LGIGE RPTTV  QL+DRS A P GKIEDVL + L +   K   I     
Subjt:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVLEIELWNKLEKLEQIGCSGP

Query:  KEEQRKRKELSWKLNK--RGKPERKHVSEDK
           ++  KE +W+  K      E + +SED+
Subjt:  KEEQRKRKELSWKLNK--RGKPERKHVSEDK

XP_030502183.1 uncharacterized protein LOC115717351 [Cannabis sativa]8.1e-2575.31Show/hide
Query:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        SA++ SK+PPKL+D GSFTIPC IGGR VGRALC LG+SINL P+SIFK+LGIGE RPTTV  QL+DRS A P GKIEDVL
Subjt:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]8.1e-2575.31Show/hide
Query:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        SA++ SK+PPKL+D GSFTIPC IGGR VGRALC LG+SINL P+SIFK+LGIGE RPTTV  QL+DRS A P GKIEDVL
Subjt:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

TrEMBL top hitse value%identityAlignment
A0A6J1D1N1 uncharacterized protein LOC1110161895.9e-2160.44Show/hide
Query:  HPVLPFLISSSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        H ++     SS  + S +P + +D GSFTIPC IGG+++GRALC LG SINL PLS+FK+LGIGE RPTTV  QL+DRS  +P GKIEDVL
Subjt:  HPVLPFLISSSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

A0A6J1DU40 uncharacterized protein LOC1110244265.9e-2167.07Show/hide
Query:  SSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        SS +  SK+PPKL+D GSFTIPC+IGG+ V RALC LG+SINL PLSIFK+L IG+  PTTVI QL+DRS  +P  KIED+L
Subjt:  SSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

A0A6J1DWX9 uncharacterized protein LOC1110251931.7e-2062.96Show/hide
Query:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        S ++T K+P K++D GSFTIP  IGG+ +G+ALC LG+SINL PLSI+K+LG+GE RPTT+  QL+DRS   P GKIEDVL
Subjt:  SALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

A0A6J1DY39 uncharacterized protein LOC1110256539.1e-2268.29Show/hide
Query:  SSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        SS +  SK+PPKL+D GSFTIPC+IGG+ VGRALC LG+SINL PLSIFK+  IG+  PTTV  QL+DRS  +P GKIEDVL
Subjt:  SSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

A0A6J1H7K8 uncharacterized protein LOC1114611675.9e-2162.92Show/hide
Query:  VLPFLISSSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
        V+P     SA++ +K+P K +D GSFTIP  IGG+ +GRALC LGSSINL PLSI+K+LGIGE RPTTV  QL+DRS   P GKIED+L
Subjt:  VLPFLISSSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATCTTAGTTAATTCAACCTCCAGGTCAAGCTCCAGGCTAAGTGTCTCCATTCATCCAGTTCTACCCTTTTTAATTTCCTCTTCTGCCCTGATTACAAGCAAGGT
GCCACCTAAACTTCAAGATTCAGGCAGTTTCACCATCCCCTGTGTGATTGGAGGAAGAAGTGTTGGACGAGCTCTATGTGTTTTGGGATCCAGCATCAACTTAACGCCTC
TATCAATCTTCAAGCAGCTAGGAATTGGGGAAGGAAGACCAACCACTGTAATTCAACAGTTGTCGGATAGGTCAACTGCAAGGCCCATTGGGAAGATAGAAGATGTGCTC
GAAATTGAGTTGTGGAATAAATTGGAGAAATTGGAACAGATCGGGTGTTCGGGACCTAAAGAAGAGCAAAGAAAGAGAAAAGAATTAAGTTGGAAGCTTAATAAAAGAGG
CAAACCAGAGAGGAAGCATGTGAGTGAGGACAAAGTATGCAAAAAGGACCCCGTGTTGGTTTGTGGGGATAGTCTTCATTCTTTGAAGCAGTTTCAGAAAAGTATGGTGG
CGTGGCCAGGTCGCAGGGAAATGCCGGGGCCGTTAAGGGTTGAATCTGGATTCCGAATCCTAGGCCTGGGGCGTTACAGAATGTTATGCTGCTGGGCGACTGGAGGGAGC
AAATTCTGTGCTGCAGCAAAACTGGGAGCAAAAACTGCCACGTCACAGTTTGTTAGCCAAGTTGACAAACTGAATTCTGTTGAGTTATTCTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATCTTAGTTAATTCAACCTCCAGGTCAAGCTCCAGGCTAAGTGTCTCCATTCATCCAGTTCTACCCTTTTTAATTTCCTCTTCTGCCCTGATTACAAGCAAGGT
GCCACCTAAACTTCAAGATTCAGGCAGTTTCACCATCCCCTGTGTGATTGGAGGAAGAAGTGTTGGACGAGCTCTATGTGTTTTGGGATCCAGCATCAACTTAACGCCTC
TATCAATCTTCAAGCAGCTAGGAATTGGGGAAGGAAGACCAACCACTGTAATTCAACAGTTGTCGGATAGGTCAACTGCAAGGCCCATTGGGAAGATAGAAGATGTGCTC
GAAATTGAGTTGTGGAATAAATTGGAGAAATTGGAACAGATCGGGTGTTCGGGACCTAAAGAAGAGCAAAGAAAGAGAAAAGAATTAAGTTGGAAGCTTAATAAAAGAGG
CAAACCAGAGAGGAAGCATGTGAGTGAGGACAAAGTATGCAAAAAGGACCCCGTGTTGGTTTGTGGGGATAGTCTTCATTCTTTGAAGCAGTTTCAGAAAAGTATGGTGG
CGTGGCCAGGTCGCAGGGAAATGCCGGGGCCGTTAAGGGTTGAATCTGGATTCCGAATCCTAGGCCTGGGGCGTTACAGAATGTTATGCTGCTGGGCGACTGGAGGGAGC
AAATTCTGTGCTGCAGCAAAACTGGGAGCAAAAACTGCCACGTCACAGTTTGTTAGCCAAGTTGACAAACTGAATTCTGTTGAGTTATTCTCGTGA
Protein sequenceShow/hide protein sequence
MQILVNSTSRSSSRLSVSIHPVLPFLISSSALITSKVPPKLQDSGSFTIPCVIGGRSVGRALCVLGSSINLTPLSIFKQLGIGEGRPTTVIQQLSDRSTARPIGKIEDVL
EIELWNKLEKLEQIGCSGPKEEQRKRKELSWKLNKRGKPERKHVSEDKVCKKDPVLVCGDSLHSLKQFQKSMVAWPGRREMPGPLRVESGFRILGLGRYRMLCCWATGGS
KFCAAAKLGAKTATSQFVSQVDKLNSVELFS