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Lag0000616 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000616
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGirdin-like
Genome locationchr4:11481873..11482764
RNA-Seq ExpressionLag0000616
SyntenyLag0000616
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.7e-3548.24Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRA--------NI
        MAE SEEY IL+ YA+ LH+QLT  QNSS+ I  +Y+ L  +Y +MK+DYDL   +F +++ RVDQTIE LR V++RANGFAEWA +  +        N 
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRA--------NI

Query:  SPMQPNADDLDRFLRMICKELGHLFSLIVHILELLSTGKGKGVVEAAQTSNPIQEIDDPAYPPGFTPQHV
               ++ D+ +  + +E+ +L   +  ILELLS GKGK  V+  Q+SNPIQ+ DDP YPPGFTP H+
Subjt:  SPMQPNADDLDRFLRMICKELGHLFSLIVHILELLSTGKGKGVVEAAQTSNPIQEIDDPAYPPGFTPQHV

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]5.2e-3260.87Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        MAE SEEY IL+ YA+SLH+QLT  QNSS+ I  +Y+ L  +Y +MK+DYDL   +F +++ RVDQTIE LR V++RA+GFAEWA +LR N   MQP+AD
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGH
        DL+RFL+MIC+ELGH
Subjt:  DLDRFLRMICKELGH

KAA0062685.1 girdin-like [Cucumis melo var. makuwa]1.4e-3262.61Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        MAE SEEY IL+ Y ESLH+QLT  QNSS  I  +Y+ L  +Y +MK+DYDLQ  +F +++ RVDQTIE LR V++RANGFAEWAA+LR N   +QP+AD
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGH
        DL+RFL+MIC+ELGH
Subjt:  DLDRFLRMICKELGH

TYK23632.1 girdin-like [Cucumis melo var. makuwa]1.1e-3261.74Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        MAE SEEY IL+ Y +SLH+QLT  QNSS+ I  +Y+ L  +Y +MK+DYDLQ  +F +++ RVDQTIE LR V++RANGFAEWAA+LR N   +QP+AD
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGH
        DL+RFL+MIC+ELGH
Subjt:  DLDRFLRMICKELGH

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]5.0e-5156.19Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        M EHSE+Y IL+ YA+SLHHQLT  QNSSE I+ +Y+ L+ +Y +MK+DYDLQ  +F  ++ RVDQTI  LR V+RRANGFAEWAA+LR N   ++P++D
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGHLFSLIVHILELLSTGKGKGVVEAAQTSNPIQEIDDPAYPPGFTPQHVRQRLHFPQPQTPQQYVATNPLY---TPVPNME
        DL+RFL+MIC+ELGH              GKGK VVE AQ+SNP+Q+ DDP YPPGFTP+H    ++  Q QT Q YVA NPL+    PVP++E
Subjt:  DLDRFLRMICKELGHLFSLIVHILELLSTGKGKGVVEAAQTSNPIQEIDDPAYPPGFTPQHVRQRLHFPQPQTPQQYVATNPLY---TPVPNME

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein8.4e-3648.24Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRA--------NI
        MAE SEEY IL+ YA+ LH+QLT  QNSS+ I  +Y+ L  +Y +MK+DYDL   +F +++ RVDQTIE LR V++RANGFAEWA +  +        N 
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRA--------NI

Query:  SPMQPNADDLDRFLRMICKELGHLFSLIVHILELLSTGKGKGVVEAAQTSNPIQEIDDPAYPPGFTPQHV
               ++ D+ +  + +E+ +L   +  ILELLS GKGK  V+  Q+SNPIQ+ DDP YPPGFTP H+
Subjt:  SPMQPNADDLDRFLRMICKELGHLFSLIVHILELLSTGKGKGVVEAAQTSNPIQEIDDPAYPPGFTPQHV

A0A5A7T4A6 Girdin-like5.6e-3260.87Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        MAE SEEY IL+ YA+ LH+QLT  QNSS+ I  +Y+ L  +Y +MK+DYDL   +F +++ RVDQTIE LR V++RANGFAEW A LR N   MQP+AD
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGH
        DL+RFL+MIC+ELGH
Subjt:  DLDRFLRMICKELGH

A0A5A7T5S7 Girdin-like2.5e-3260.87Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        MAE SEEY IL+ YA+SLH+QLT  QNSS+ I  +Y+ L  +Y +MK+DYDL   +F +++ RVDQTIE LR V++RA+GFAEWA +LR N   MQP+AD
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGH
        DL+RFL+MIC+ELGH
Subjt:  DLDRFLRMICKELGH

A0A5A7V9X6 Girdin-like6.7e-3362.61Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        MAE SEEY IL+ Y ESLH+QLT  QNSS  I  +Y+ L  +Y +MK+DYDLQ  +F +++ RVDQTIE LR V++RANGFAEWAA+LR N   +QP+AD
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGH
        DL+RFL+MIC+ELGH
Subjt:  DLDRFLRMICKELGH

A0A5D3DJ95 Girdin-like5.1e-3361.74Show/hide
Query:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD
        MAE SEEY IL+ Y +SLH+QLT  QNSS+ I  +Y+ L  +Y +MK+DYDLQ  +F +++ RVDQTIE LR V++RANGFAEWAA+LR N   +QP+AD
Subjt:  MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNAD

Query:  DLDRFLRMICKELGH
        DL+RFL+MIC+ELGH
Subjt:  DLDRFLRMICKELGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCACTCAGAAGAATATGGAATACTGAGAAAATATGCTGAGTCTTTACACCACCAGCTCACTGTACACCAAAATTCAAGTGAAATGATATTGCATAAGTATCA
GCAGCTGGAGGCAAATTACAAAGAAATGAAGATTGATTATGACCTACAAGGAATAAATTTTCATATGATCTTAGGGCGTGTGGATCAAACCATTGAGATTCTTAGATTCG
TTGCTAGAAGGGCTAATGGCTTTGCAGAATGGGCAGCTGAACTAAGAGCCAATATTTCTCCGATGCAACCTAACGCAGATGACTTGGATAGGTTTCTAAGGATGATATGC
AAAGAACTTGGGCATCTGTTTTCATTAATTGTTCATATTCTAGAATTACTATCAACTGGCAAAGGGAAAGGGGTTGTAGAAGCAGCGCAGACAAGCAATCCAATCCAGGA
AATCGATGATCCTGCTTATCCACCAGGATTTACTCCTCAACATGTACGACAACGCCTGCATTTTCCACAGCCACAAACCCCCCAACAATATGTTGCTACGAATCCACTCT
ACACTCCTGTTCCAAATATGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGCACTCAGAAGAATATGGAATACTGAGAAAATATGCTGAGTCTTTACACCACCAGCTCACTGTACACCAAAATTCAAGTGAAATGATATTGCATAAGTATCA
GCAGCTGGAGGCAAATTACAAAGAAATGAAGATTGATTATGACCTACAAGGAATAAATTTTCATATGATCTTAGGGCGTGTGGATCAAACCATTGAGATTCTTAGATTCG
TTGCTAGAAGGGCTAATGGCTTTGCAGAATGGGCAGCTGAACTAAGAGCCAATATTTCTCCGATGCAACCTAACGCAGATGACTTGGATAGGTTTCTAAGGATGATATGC
AAAGAACTTGGGCATCTGTTTTCATTAATTGTTCATATTCTAGAATTACTATCAACTGGCAAAGGGAAAGGGGTTGTAGAAGCAGCGCAGACAAGCAATCCAATCCAGGA
AATCGATGATCCTGCTTATCCACCAGGATTTACTCCTCAACATGTACGACAACGCCTGCATTTTCCACAGCCACAAACCCCCCAACAATATGTTGCTACGAATCCACTCT
ACACTCCTGTTCCAAATATGGAATAA
Protein sequenceShow/hide protein sequence
MAEHSEEYGILRKYAESLHHQLTVHQNSSEMILHKYQQLEANYKEMKIDYDLQGINFHMILGRVDQTIEILRFVARRANGFAEWAAELRANISPMQPNADDLDRFLRMIC
KELGHLFSLIVHILELLSTGKGKGVVEAAQTSNPIQEIDDPAYPPGFTPQHVRQRLHFPQPQTPQQYVATNPLYTPVPNME