; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000634 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000634
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:11785052..11786500
RNA-Seq ExpressionLag0000634
SyntenyLag0000634
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONH95136.1 hypothetical protein PRUPE_7G053800 [Prunus persica]4.5e-1832.29Show/hide
Query:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------
        +   +   + W     + + +L  N+F+FS  ++E+++R+L  GSW F+ FLLVL++   MV+P+ +      FW +                       
Subjt:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------

Query:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGS-CWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQ
                        LRVRV LD+TKPLRRC+ V L + +       IRYEKLP  C  CG +DH  K+C S Y G G     K YG W Q
Subjt:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGS-CWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQ

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]2.9e-2534.02Show/hide
Query:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------
        V++   K AW +     +V+ +G N+FLF+     ++ R+LR G W FD  L+++  P+ + KP  M+F+ V+                           
Subjt:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------

Query:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG
                    W   LRVRV  D+ KPL R IK+NLD P+G CW PI+YE+LPD   +CG +DH +KDC+   +   S S+  QYG WL++ G
Subjt:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]3.4e-1832.82Show/hide
Query:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------
        + +R   KS W +      E LG N+++   +S  E+ RVL  G W F+  LLVL+ P    +P  M F F AFW +                       
Subjt:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------

Query:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDC--NSYYLGAGSPSQCKQYGMWLQYT
                        +RVRV +D++KPLRR IK+   +     W P+RYEKLPD C  CG I H  ++C   S  +   SP   +QYG WL+ T
Subjt:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDC--NSYYLGAGSPSQCKQYGMWLQYT

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]6.0e-3138.46Show/hide
Query:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------
        DV+ +    AW +   LTVE +G N+FLF    E +  RV++ G W FD  L+VL KP      + +EF  VAF                          
Subjt:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------

Query:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQC-KQYGMWLQYTG
                    W  SLR+RV +DITKPLRR IK+N+D P+G CW PI+YE+LPD C +CG+I H   DC++ YL A   S+   +YG WL++ G
Subjt:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQC-KQYGMWLQYTG

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.0e-2230.2Show/hide
Query:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFK----FVAF----------------------
        VM+   ++AW +      V+ LG N+FLFS     ++ ++ + G W FD  L++++KP+ ++ P+ ++F     +V F                      
Subjt:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFK----FVAF----------------------

Query:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG------
                    W  +LRVRV LDI+KPLRR IK+NLD P+G  W PI+YE+LPD C +CG+                S  +  QYG WL+Y G      
Subjt:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG------

Query:  ------RTTTLFRSPSNSLLSKNKMVVDYPTALQTTPAAGTASFP
              +   L +S +NS  S    V      +Q+ PA G  + P
Subjt:  ------RTTTLFRSPSNSLLSKNKMVVDYPTALQTTPAAGTASFP

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054811.4e-2534.02Show/hide
Query:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------
        V++   K AW +     +V+ +G N+FLF+     ++ R+LR G W FD  L+++  P+ + KP  M+F+ V+                           
Subjt:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------

Query:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG
                    W   LRVRV  D+ KPL R IK+NLD P+G CW PI+YE+LPD   +CG +DH +KDC+   +   S S+  QYG WL++ G
Subjt:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG

A0A6J1D765 uncharacterized protein LOC1110179021.7e-1832.82Show/hide
Query:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------
        + +R   KS W +      E LG N+++   +S  E+ RVL  G W F+  LLVL+ P    +P  M F F AFW +                       
Subjt:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------

Query:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDC--NSYYLGAGSPSQCKQYGMWLQYT
                        +RVRV +D++KPLRR IK+   +     W P+RYEKLPD C  CG I H  ++C   S  +   SP   +QYG WL+ T
Subjt:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDC--NSYYLGAGSPSQCKQYGMWLQYT

A0A6J1DU55 uncharacterized protein LOC1110231352.9e-3138.46Show/hide
Query:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------
        DV+ +    AW +   LTVE +G N+FLF    E +  RV++ G W FD  L+VL KP      + +EF  VAF                          
Subjt:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAF--------------------------

Query:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQC-KQYGMWLQYTG
                    W  SLR+RV +DITKPLRR IK+N+D P+G CW PI+YE+LPD C +CG+I H   DC++ YL A   S+   +YG WL++ G
Subjt:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQC-KQYGMWLQYTG

A0A6J1DX30 uncharacterized protein LOC1110248745.0e-2330.2Show/hide
Query:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFK----FVAF----------------------
        VM+   ++AW +      V+ LG N+FLFS     ++ ++ + G W FD  L++++KP+ ++ P+ ++F     +V F                      
Subjt:  VMRKNFKSAWNI-LAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFK----FVAF----------------------

Query:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG------
                    W  +LRVRV LDI+KPLRR IK+NLD P+G  W PI+YE+LPD C +CG+                S  +  QYG WL+Y G      
Subjt:  ------------WKESLRVRVTLDITKPLRRCIKVNLDEPLGSCWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTG------

Query:  ------RTTTLFRSPSNSLLSKNKMVVDYPTALQTTPAAGTASFP
              +   L +S +NS  S    V      +Q+ PA G  + P
Subjt:  ------RTTTLFRSPSNSLLSKNKMVVDYPTALQTTPAAGTASFP

M5W5K8 Uncharacterized protein2.2e-1832.29Show/hide
Query:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------
        +   +   + W     + + +L  N+F+FS  ++E+++R+L  GSW F+ FLLVL++   MV+P+ +      FW +                       
Subjt:  DVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKE-----------------------

Query:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGS-CWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQ
                        LRVRV LD+TKPLRRC+ V L + +       IRYEKLP  C  CG +DH  K+C S Y G G     K YG W Q
Subjt:  ---------------SLRVRVTLDITKPLRRCIKVNLDEPLGS-CWTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGTTACAGATGTAATGAGGAAAAACTTCAAATCGGCGTGGAATATTCTGGCGGGTCTCACAGTGGAGAAATTAGGACCAAATATGTTCCTATTTTCTATCCGATC
AGAGGAGGAACAGGTGCGTGTTCTTCGTCAGGGATCGTGGCTGTTCGACATGTTCCTACTTGTCCTCTCCAAACCAATTCCCATGGTCAAACCGACTGCCATGGAGTTTA
AGTTCGTGGCTTTTTGGAAGGAAAGTTTGCGTGTTCGTGTTACTCTCGATATCACAAAACCTCTCCGCCGATGCATCAAAGTGAATCTTGATGAACCCTTGGGAAGTTGC
TGGACTCCAATCCGATATGAGAAACTCCCGGATTTGTGCGAATACTGTGGAATAATTGACCATGGTGTGAAAGACTGCAATTCCTACTACCTTGGTGCTGGATCACCATC
TCAATGCAAACAATATGGAATGTGGCTGCAATACACGGGTCGAACAACCACCTTATTTCGATCTCCTAGCAACAGTCTGTTGAGCAAGAACAAAATGGTGGTTGATTATC
CTACTGCCCTCCAGACAACACCAGCTGCTGGCACTGCGAGTTTCCCTCGGTTCCCAGCCCAAATCGGTGGTTTTTTGGGTACCATGAAGGGATCTCCGTTGACTGACTCT
GGTGTGAAACCTATGGACATTTTGTTGGCGTTGGTGGAGGAACAGAACGAGCCACCGCATGCAATCAATAGCGAATTTAATCAAGAATTAAATGCATTTAAGGTGGACGT
TACTTCGGCTGAGACAAATAAGGTAGAAAAGAAGCTTGAGTATAAAGATTTTTTTGTCGTTTCTAATTCACAGAAATTAATGGAATCAACTGTGGAGAAAATTGAGGCAA
AAATTCAGGAATTCAGTAACTGTCCTCCTTCAAGTCTTCGGCAACCAAATGGGACGCTTCCAGAAGATCTGAATCTCCCCCACTTTACTGGGCTGAATAGTGGATTGAAG
ATAGGGGAAGTGGTGTCTAAGTTGGGCCCTTTCCAACCAGCCCAACAACAACCCGAAATGAAGAATGAGGCAAAGTTCCAAATTGGGCGTACACCTCCACAGCAGGCCCA
ATCTTTCGCCGAGCTTATTCCAAATCAACCGCAATTCGTGTTGGGCCTCTCAAATTCTAAAACTTGGAAGCGCCTGGTTCGCAACAGCAACGTAGAGCATGGGGAGTCGT
CAAGTGAAGATACCTTTAAAAAACGATTGGCTGATGGACTGCTTAATGGCACAAAGAAGCGTGCACGAACTGAGGATGTGGATTCACCTGATCATGAAGAACCAGCGGTG
GAGGCTGTTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGTTACAGATGTAATGAGGAAAAACTTCAAATCGGCGTGGAATATTCTGGCGGGTCTCACAGTGGAGAAATTAGGACCAAATATGTTCCTATTTTCTATCCGATC
AGAGGAGGAACAGGTGCGTGTTCTTCGTCAGGGATCGTGGCTGTTCGACATGTTCCTACTTGTCCTCTCCAAACCAATTCCCATGGTCAAACCGACTGCCATGGAGTTTA
AGTTCGTGGCTTTTTGGAAGGAAAGTTTGCGTGTTCGTGTTACTCTCGATATCACAAAACCTCTCCGCCGATGCATCAAAGTGAATCTTGATGAACCCTTGGGAAGTTGC
TGGACTCCAATCCGATATGAGAAACTCCCGGATTTGTGCGAATACTGTGGAATAATTGACCATGGTGTGAAAGACTGCAATTCCTACTACCTTGGTGCTGGATCACCATC
TCAATGCAAACAATATGGAATGTGGCTGCAATACACGGGTCGAACAACCACCTTATTTCGATCTCCTAGCAACAGTCTGTTGAGCAAGAACAAAATGGTGGTTGATTATC
CTACTGCCCTCCAGACAACACCAGCTGCTGGCACTGCGAGTTTCCCTCGGTTCCCAGCCCAAATCGGTGGTTTTTTGGGTACCATGAAGGGATCTCCGTTGACTGACTCT
GGTGTGAAACCTATGGACATTTTGTTGGCGTTGGTGGAGGAACAGAACGAGCCACCGCATGCAATCAATAGCGAATTTAATCAAGAATTAAATGCATTTAAGGTGGACGT
TACTTCGGCTGAGACAAATAAGGTAGAAAAGAAGCTTGAGTATAAAGATTTTTTTGTCGTTTCTAATTCACAGAAATTAATGGAATCAACTGTGGAGAAAATTGAGGCAA
AAATTCAGGAATTCAGTAACTGTCCTCCTTCAAGTCTTCGGCAACCAAATGGGACGCTTCCAGAAGATCTGAATCTCCCCCACTTTACTGGGCTGAATAGTGGATTGAAG
ATAGGGGAAGTGGTGTCTAAGTTGGGCCCTTTCCAACCAGCCCAACAACAACCCGAAATGAAGAATGAGGCAAAGTTCCAAATTGGGCGTACACCTCCACAGCAGGCCCA
ATCTTTCGCCGAGCTTATTCCAAATCAACCGCAATTCGTGTTGGGCCTCTCAAATTCTAAAACTTGGAAGCGCCTGGTTCGCAACAGCAACGTAGAGCATGGGGAGTCGT
CAAGTGAAGATACCTTTAAAAAACGATTGGCTGATGGACTGCTTAATGGCACAAAGAAGCGTGCACGAACTGAGGATGTGGATTCACCTGATCATGAAGAACCAGCGGTG
GAGGCTGTTGAATAG
Protein sequenceShow/hide protein sequence
MGVTDVMRKNFKSAWNILAGLTVEKLGPNMFLFSIRSEEEQVRVLRQGSWLFDMFLLVLSKPIPMVKPTAMEFKFVAFWKESLRVRVTLDITKPLRRCIKVNLDEPLGSC
WTPIRYEKLPDLCEYCGIIDHGVKDCNSYYLGAGSPSQCKQYGMWLQYTGRTTTLFRSPSNSLLSKNKMVVDYPTALQTTPAAGTASFPRFPAQIGGFLGTMKGSPLTDS
GVKPMDILLALVEEQNEPPHAINSEFNQELNAFKVDVTSAETNKVEKKLEYKDFFVVSNSQKLMESTVEKIEAKIQEFSNCPPSSLRQPNGTLPEDLNLPHFTGLNSGLK
IGEVVSKLGPFQPAQQQPEMKNEAKFQIGRTPPQQAQSFAELIPNQPQFVLGLSNSKTWKRLVRNSNVEHGESSSEDTFKKRLADGLLNGTKKRARTEDVDSPDHEEPAV
EAVE