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Lag0000641 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000641
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr4:11927069..11927443
RNA-Seq ExpressionLag0000641
SyntenyLag0000641
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI29414.1 hypothetical protein PRUPE_1G197400 [Prunus persica]1.8e-0944.94Show/hide
Query:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE
        VV I + D D+V E L+ A++ K+LTTK  N E F+  M +IWN    VR K +G N FL  F     ++R+   GP NFDKAL+ +EE
Subjt:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE

PQQ12378.1 hypothetical protein Pyn_32588 [Prunus yedoensis var. nudiflora]1.1e-0943.82Show/hide
Query:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE
        VV I + D D+V E L+ A++ K+LTT++ N E F+  M +IWN    VR K +G N FL  F     + R+   GP NFDKAL+++EE
Subjt:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]4.3e-1135.78Show/hide
Query:  MENLRISAYKKEKVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVI
        +E L+++  +K ++  + +D++++  +  Q +++CK+LT K I  EVF+  MPRIW     V+ +++G+N FLCKF     K +I   GP  FDK+++++
Subjt:  MENLRISAYKKEKVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVI

Query:  EEAPRSKQN
        EE PR+  N
Subjt:  EEAPRSKQN

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]4.0e-0937.11Show/hide
Query:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN
        ++  + +D++++  +  Q +++CK+LT K I  EVF+  MPRIW     V+ +++G+N FLCKF     K +I   GP  FDK+++++EE PR+  N
Subjt:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN

XP_022154991.1 uncharacterized protein LOC111022134 isoform X2 [Momordica charantia]4.0e-0937.11Show/hide
Query:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN
        ++  + +D++++  +  Q +++CK+LT K I  EVF+  MPRIW     V+ +++G+N FLCKF     K +I   GP  FDK+++++EE PR+  N
Subjt:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN

TrEMBL top hitse value%identityAlignment
A0A251R036 DUF4283 domain-containing protein8.8e-1044.94Show/hide
Query:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE
        VV I + D D+V E L+ A++ K+LTTK  N E F+  M +IWN    VR K +G N FL  F     ++R+   GP NFDKAL+ +EE
Subjt:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE

A0A314Z5A5 DUF4283 domain-containing protein5.1e-1043.82Show/hide
Query:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE
        VV I + D D+V E L+ A++ K+LTT++ N E F+  M +IWN    VR K +G N FL  F     + R+   GP NFDKAL+++EE
Subjt:  VVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEE

A0A6J1CQJ5 uncharacterized protein LOC1110134132.1e-1135.78Show/hide
Query:  MENLRISAYKKEKVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVI
        +E L+++  +K ++  + +D++++  +  Q +++CK+LT K I  EVF+  MPRIW     V+ +++G+N FLCKF     K +I   GP  FDK+++++
Subjt:  MENLRISAYKKEKVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVI

Query:  EEAPRSKQN
        EE PR+  N
Subjt:  EEAPRSKQN

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X12.0e-0937.11Show/hide
Query:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN
        ++  + +D++++  +  Q +++CK+LT K I  EVF+  MPRIW     V+ +++G+N FLCKF     K +I   GP  FDK+++++EE PR+  N
Subjt:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.0e-0937.11Show/hide
Query:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN
        ++  + +D++++  +  Q +++CK+LT K I  EVF+  MPRIW     V+ +++G+N FLCKF     K +I   GP  FDK+++++EE PR+  N
Subjt:  KVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAATCTGAGAATATCAGCTTACAAAAAGGAGAAAGTGGTTACTATTGAAGATGACGATTTAGACGAAGTGATTGAGGATCTCCAAGACGCAATTCTATGCAAGAT
TCTCACCACAAAGATGATTAACCCGGAGGTCTTTAGAACCTTCATGCCAAGGATTTGGAACAAGAAAGGGAGAGTGAGAACAAAAACGATTGGAAGAAACACTTTCCTAT
GCAAGTTCAACAACAACCACAAAAAAGAAAGAATCAATATAGGAGGACCCAAGAATTTCGATAAAGCGTTAATCGTCATTGAAGAAGCCCCAAGGAGCAAGCAGAATATC
ACAAACGGAATTCAGATATGTGAGTTTTTGGGTTCATATCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAATCTGAGAATATCAGCTTACAAAAAGGAGAAAGTGGTTACTATTGAAGATGACGATTTAGACGAAGTGATTGAGGATCTCCAAGACGCAATTCTATGCAAGAT
TCTCACCACAAAGATGATTAACCCGGAGGTCTTTAGAACCTTCATGCCAAGGATTTGGAACAAGAAAGGGAGAGTGAGAACAAAAACGATTGGAAGAAACACTTTCCTAT
GCAAGTTCAACAACAACCACAAAAAAGAAAGAATCAATATAGGAGGACCCAAGAATTTCGATAAAGCGTTAATCGTCATTGAAGAAGCCCCAAGGAGCAAGCAGAATATC
ACAAACGGAATTCAGATATGTGAGTTTTTGGGTTCATATCCATGA
Protein sequenceShow/hide protein sequence
MENLRISAYKKEKVVTIEDDDLDEVIEDLQDAILCKILTTKMINPEVFRTFMPRIWNKKGRVRTKTIGRNTFLCKFNNNHKKERINIGGPKNFDKALIVIEEAPRSKQNI
TNGIQICEFLGSYP