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Lag0000657 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000657
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationchr4:12179355..12180390
RNA-Seq ExpressionLag0000657
SyntenyLag0000657
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033232.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]2.8e-2459.6Show/hide
Query:  CRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSYKMM
        C  GD     W +  +D++HTCS+DV LTDH+  TFT IKD IK KI +A SEL  PKDI+ +I +E+GL I YQ AWRAREA L+EI GSPEDSYKM+
Subjt:  CRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSYKMM

KAA0051302.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]4.4e-2561.17Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +R +C    D S  W V  FD +HTCS+DV LTDH+Q TFT IKD IK KIS+A SEL   KDI+ FI +++GL  SYQKAWRA EATL++IRGS EDSY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMM
        KM+
Subjt:  KMM

KAA0058851.1 protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo var. makuwa]4.8e-2457.28Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +R++C    D    W +  FD++HTCSIDV LTDH+  TFT IKD IK KIS+  SEL  PKDI+ FI +E+ L ISYQKAWRARE  L++  GSPE+SY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMM
        KM+
Subjt:  KMM

XP_008441658.1 PREDICTED: uncharacterized protein LOC103485740 [Cucumis melo]4.8e-2457.28Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +R++C    D    W +  FD++HTCSIDV LTDH+  TFT IKD IK KIS+  SEL  PKDI+ FI +E+ L ISYQKAWRARE  L++  GSPE+SY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMM
        KM+
Subjt:  KMM

XP_008464510.1 PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo]3.7e-2457.14Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +  +C   +D S  W +  FD +HTCS+DV LTDH+Q TF  IKD IK KIS+A S+L  PKDI+ FI +E+GL ISYQKAWR REA L++I  S EDSY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMMFI
        KM+ I
Subjt:  KMMFI

TrEMBL top hitse value%identityAlignment
A0A1S3B4K4 uncharacterized protein LOC1034857402.3e-2457.28Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +R++C    D    W +  FD++HTCSIDV LTDH+  TFT IKD IK KIS+  SEL  PKDI+ FI +E+ L ISYQKAWRARE  L++  GSPE+SY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMM
        KM+
Subjt:  KMM

A0A1S3CLS8 protein FAR-RED ELONGATED HYPOCOTYL 3-like1.8e-2457.14Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +  +C   +D S  W +  FD +HTCS+DV LTDH+Q TF  IKD IK KIS+A S+L  PKDI+ FI +E+GL ISYQKAWR REA L++I  S EDSY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMMFI
        KM+ I
Subjt:  KMMFI

A0A5A7U620 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.1e-2561.17Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +R +C    D S  W V  FD +HTCS+DV LTDH+Q TFT IKD IK KIS+A SEL   KDI+ FI +++GL  SYQKAWRA EATL++IRGS EDSY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMM
        KM+
Subjt:  KMM

A0A5D3BGB6 Protein FAR-RED ELONGATED HYPOCOTYL 3-like1.4e-2459.6Show/hide
Query:  CRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSYKMM
        C  GD     W +  +D++HTCS+DV LTDH+  TFT IKD IK KI +A SEL  PKDI+ +I +E+GL I YQ AWRAREA L+EI GSPEDSYKM+
Subjt:  CRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSYKMM

A0A5D3DK39 Protein FAR-RED ELONGATED HYPOCOTYL 3-like2.3e-2457.28Show/hide
Query:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY
        +R++C    D    W +  FD++HTCSIDV LTDH+  TFT IKD IK KIS+  SEL  PKDI+ FI +E+ L ISYQKAWRARE  L++  GSPE+SY
Subjt:  IRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSY

Query:  KMM
        KM+
Subjt:  KMM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCTTAAGTCTTTGAAGATAAGGACAGCATGTCGGTTCGGAGATGACGGTAGTGCCACTTGGGCTGTCAAGGGATTTGACAATGATCATACATGTTCAATTGATGT
TGTATTGACTGACCACAAGCAAACGACATTTACCTTCATTAAGGATTGTATTAAGCGGAAGATTAGCATTGCGACTAGTGAATTACCCATTCCTAAAGACATTATATCAT
TTATCCTATCAGAATATGGTTTGCGTATTAGCTATCAAAAAGCTTGGCGTGCTCGTGAAGCTACATTAAATGAGATTAGAGGATCTCCAGAAGACTCATACAAAATGATG
TTCATTTTACCGTCAGAAGATGCAGTTGTAGGATGTGGGACATTTTTCGAGATTCCATGTTTTCAAGCTTGTGTCGTTTTGACTTCGAAGCACTTGTCTATTAAGGAGTA
TATATCAAATTTCTACTTGAATAGTACTCTCTCATCAATATATAGTGGTCTAATCCATCCATTAGGCAATGAGTCTAGCTGGCATATCCCCGATGACATCAAAAGTAATC
AGTTCTCCCTCCAAACGTTAAGCGTTTCGTTGGTAGGCCAAAGAAGATCAGAATCCCCTCACAGATGGAGTTCAAAAGATGGGTTAAATGTGGTCGTTGTGGCAGGATTG
GGCATAACAAGAAGACTTGTAGATTTGCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCTTAAGTCTTTGAAGATAAGGACAGCATGTCGGTTCGGAGATGACGGTAGTGCCACTTGGGCTGTCAAGGGATTTGACAATGATCATACATGTTCAATTGATGT
TGTATTGACTGACCACAAGCAAACGACATTTACCTTCATTAAGGATTGTATTAAGCGGAAGATTAGCATTGCGACTAGTGAATTACCCATTCCTAAAGACATTATATCAT
TTATCCTATCAGAATATGGTTTGCGTATTAGCTATCAAAAAGCTTGGCGTGCTCGTGAAGCTACATTAAATGAGATTAGAGGATCTCCAGAAGACTCATACAAAATGATG
TTCATTTTACCGTCAGAAGATGCAGTTGTAGGATGTGGGACATTTTTCGAGATTCCATGTTTTCAAGCTTGTGTCGTTTTGACTTCGAAGCACTTGTCTATTAAGGAGTA
TATATCAAATTTCTACTTGAATAGTACTCTCTCATCAATATATAGTGGTCTAATCCATCCATTAGGCAATGAGTCTAGCTGGCATATCCCCGATGACATCAAAAGTAATC
AGTTCTCCCTCCAAACGTTAAGCGTTTCGTTGGTAGGCCAAAGAAGATCAGAATCCCCTCACAGATGGAGTTCAAAAGATGGGTTAAATGTGGTCGTTGTGGCAGGATTG
GGCATAACAAGAAGACTTGTAGATTTGCACTAA
Protein sequenceShow/hide protein sequence
MMLKSLKIRTACRFGDDGSATWAVKGFDNDHTCSIDVVLTDHKQTTFTFIKDCIKRKISIATSELPIPKDIISFILSEYGLRISYQKAWRAREATLNEIRGSPEDSYKMM
FILPSEDAVVGCGTFFEIPCFQACVVLTSKHLSIKEYISNFYLNSTLSSIYSGLIHPLGNESSWHIPDDIKSNQFSLQTLSVSLVGQRRSESPHRWSSKDGLNVVVVAGL
GITRRLVDLH