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Lag0000662 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000662
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationchr4:12241942..12242277
RNA-Seq ExpressionLag0000662
SyntenyLag0000662
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.4e-1348.18Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +K + +SD+YTGP+T SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +P+VMSVMM DV  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+NLLMK V
Subjt:  RKLNLLMKAV

XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]1.4e-1348.18Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +K + +SD+YTGP+T SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +P+VMSVMM DV  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+NLLMK V
Subjt:  RKLNLLMKAV

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.4e-1348.18Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +K + +SD+YTGP+T SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +P+VMSVMM DV  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+NLLMK V
Subjt:  RKLNLLMKAV

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.4e-1348.18Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +K + +SD+YTGP+T SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +P+VMSVMM DV  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+NLLMK V
Subjt:  RKLNLLMKAV

XP_031742199.1 uncharacterized protein LOC105435721 [Cucumis sativus]1.4e-1348.18Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +K + +SD+YTGP+T SRS+GI I+      A+A  I K + ES K  + +K+NPL+      S +     +P+VMSVMM DV  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+NLLMK V
Subjt:  RKLNLLMKAV

TrEMBL top hitse value%identityAlignment
A0A5A7VFQ8 Ty3-gypsy retrotransposon protein2.2e-1243.64Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +K + +SD+Y GP+T SRS+GI  ++D     VA  I K + ES K  + +K+NPL+++   TS +      P+VMSVMM D+  + +M +ME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+N LMK +
Subjt:  RKLNLLMKAV

A0A5D3BDK1 Ty3-gypsy retrotransposon protein7.6e-1343.64Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +  + +SD+YTGP+T +RS+GI I+E      +A  I K + ES K  + +K+NPL+++    S +     +P+VMSV+M D+  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+N LMK V
Subjt:  RKLNLLMKAV

A0A5D3BY54 Ty3-gypsy retrotransposon protein2.0e-1345.45Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KKA +  + +S++YTGP+T SRS+GI  ++D     VA  I K + ES K  + +K+NPL+++   +S +     +P+VMSVMM D+  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+N LMKAV
Subjt:  RKLNLLMKAV

A0A5D3CVH6 Ty3-gypsy retrotransposon protein2.2e-1244.55Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        M  KKA +K + +SD+YTGP+T SRS+GI  ++D     VA RI K + ES K  + +K+NPL+++    S +     +P+VMS MM D+    +M EME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+N LMK V
Subjt:  RKLNLLMKAV

A0A5D3DXA8 Ty3-gypsy retrotransposon protein3.4e-1344.55Show/hide
Query:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME
        MA KK  +  + +SD+YTGP+THSR +GI I+E      VA  I K + ES K  + +K+NPL+++    S +     +P+VMS+MM D+  + +MAEME
Subjt:  MAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEME

Query:  RKLNLLMKAV
        RK+N LMK V
Subjt:  RKLNLLMKAV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCACCAAAGAAAGCTCCCGCGAAGGTTACAACATCAAGCGACTCTTACACGGGTCCTGTCACTCATAGTCGTTCCCAAGGAATAGAGATTAAGGAGGATCACAC
TCCTCTCGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCGGTCAAAGACAACCCGTTGTTCGAATCTGTCATTCCAACATCTAAGC
AACCAAATGATACACTAAATCCTAATGTGATGTCCGTCATGATGGATGATGTAGACCAGGATGAAAGTATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCA
GTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGGCACCAAAGAAAGCTCCCGCGAAGGTTACAACATCAAGCGACTCTTACACGGGTCCTGTCACTCATAGTCGTTCCCAAGGAATAGAGATTAAGGAGGATCACAC
TCCTCTCGCTGTTGCAAGCAGGATCTCAAAGTTGATTGAAGAATCCTCTAAGGATAAGGTTGCGGTCAAAGACAACCCGTTGTTCGAATCTGTCATTCCAACATCTAAGC
AACCAAATGATACACTAAATCCTAATGTGATGTCCGTCATGATGGATGATGTAGACCAGGATGAAAGTATGGCAGAGATGGAAAGAAAACTCAATCTCTTAATGAAGGCA
GTTTGA
Protein sequenceShow/hide protein sequence
MMAPKKAPAKVTTSSDSYTGPVTHSRSQGIEIKEDHTPLAVASRISKLIEESSKDKVAVKDNPLFESVIPTSKQPNDTLNPNVMSVMMDDVDQDESMAEMERKLNLLMKA
V