| GenBank top hits | e value | %identity | Alignment |
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| KAG6581699.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] | 9.1e-46 | 72.79 | Show/hide |
Query: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
LRR ++ + H H S I N IDLRS LAVSYAFCG VPLARK+FDELSDRS+FLWNA+IKMY+D GLHFD LR+F SMI SG CWPDKY
Subjt: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
Query: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
TFPLVIKACSEMSMLDVGVL+HGRALVSGFSSN FV
Subjt: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
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| KAG7018180.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma] | 9.1e-46 | 72.79 | Show/hide |
Query: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
LRR ++ + H H S I N IDLRS LAVSYAFCG VPLARK+FDELSDRS+FLWNA+IKMY+D GLHFD LR+F SMI SG CWPDKY
Subjt: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
Query: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
TFPLVIKACSEMSMLDVGVL+HGRALVSGFSSN FV
Subjt: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
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| XP_011653372.1 pentatricopeptide repeat-containing protein At5g39350 [Cucumis sativus] | 5.4e-46 | 77.5 | Show/hide |
Query: HNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLD
H H S + PN I L S+LAVSYAFCGCVPLARK+FD+LSD S+FLWNA+IKMY+D G HFD LRVFDSMICSG CWPDKYTFPLVIKACS MSML+
Subjt: HNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLD
Query: VGVLVHGRALVSGFSSNTFV
VGVL+HGRALVSGFSSN FV
Subjt: VGVLVHGRALVSGFSSNTFV
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| XP_022155025.1 pentatricopeptide repeat-containing protein At5g39350 [Momordica charantia] | 6.1e-50 | 87.96 | Show/hide |
Query: PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVS
PNSI+LRSNLAVSYAFCGCVPLARK+FDE+SDRS+FLWNA+IKMY+D+GLH D L+VFDSMICSG CWPDKYTFPLVIKACSE+SML+VGVLVHGRALVS
Subjt: PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVS
Query: GFSSNTFV
GFSSNTFV
Subjt: GFSSNTFV
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| XP_022956303.1 pentatricopeptide repeat-containing protein At5g39350 isoform X1 [Cucurbita moschata] | 9.1e-46 | 72.79 | Show/hide |
Query: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
LRR ++ + H H S I N IDLRS LAVSYAFCG VPLARK+FDELSDRS+FLWNA+IKMY+D GLHFD LR+F SMI SG CWPDKY
Subjt: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
Query: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
TFPLVIKACSEMSMLDVGVL+HGRALVSGFSSN FV
Subjt: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KVP5 Uncharacterized protein | 2.6e-46 | 77.5 | Show/hide |
Query: HNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLD
H H S + PN I L S+LAVSYAFCGCVPLARK+FD+LSD S+FLWNA+IKMY+D G HFD LRVFDSMICSG CWPDKYTFPLVIKACS MSML+
Subjt: HNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLD
Query: VGVLVHGRALVSGFSSNTFV
VGVL+HGRALVSGFSSN FV
Subjt: VGVLVHGRALVSGFSSNTFV
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| A0A5A7VJI1 Pentatricopeptide repeat-containing protein | 5.8e-46 | 77.5 | Show/hide |
Query: HNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLD
H H S I PN I L S+LAVSYAFCGCVPLARK+FD+LSD S+FLWNA+IKMY+D G HFD LRVFDSMICSG CWPDKYTFPLVIK+CS MSML+
Subjt: HNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLD
Query: VGVLVHGRALVSGFSSNTFV
VGVL+HGRALVSGFSSN FV
Subjt: VGVLVHGRALVSGFSSNTFV
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| A0A6J1DL96 pentatricopeptide repeat-containing protein At5g39350 | 3.0e-50 | 87.96 | Show/hide |
Query: PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVS
PNSI+LRSNLAVSYAFCGCVPLARK+FDE+SDRS+FLWNA+IKMY+D+GLH D L+VFDSMICSG CWPDKYTFPLVIKACSE+SML+VGVLVHGRALVS
Subjt: PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVS
Query: GFSSNTFV
GFSSNTFV
Subjt: GFSSNTFV
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| A0A6J1GWF0 pentatricopeptide repeat-containing protein At5g39350 isoform X1 | 4.4e-46 | 72.79 | Show/hide |
Query: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
LRR ++ + H H S I N IDLRS LAVSYAFCG VPLARK+FDELSDRS+FLWNA+IKMY+D GLHFD LR+F SMI SG CWPDKY
Subjt: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
Query: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
TFPLVIKACSEMSMLDVGVL+HGRALVSGFSSN FV
Subjt: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
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| A0A6J1GYN0 pentatricopeptide repeat-containing protein At5g39350 isoform X2 | 4.4e-46 | 72.79 | Show/hide |
Query: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
LRR ++ + H H S I N IDLRS LAVSYAFCG VPLARK+FDELSDRS+FLWNA+IKMY+D GLHFD LR+F SMI SG CWPDKY
Subjt: LRRRLLSQQNQDSPCPHNHLRDSPI---PNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKY
Query: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
TFPLVIKACSEMSMLDVGVL+HGRALVSGFSSN FV
Subjt: TFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNTFV
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0C899 Putative pentatricopeptide repeat-containing protein At3g49142 | 4.6e-16 | 42.73 | Show/hide |
Query: DLRSN------LAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRAL
DLR N L +YA V ARK+FDE+ +R+V + N MI+ Y++NG + +G++VF +M C PD YTFP V+KACS + +G +HG A
Subjt: DLRSN------LAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRAL
Query: VSGFSSNTFV
G SS FV
Subjt: VSGFSSNTFV
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| Q0WN60 Pentatricopeptide repeat-containing protein At1g18485 | 1.9e-14 | 37.86 | Show/hide |
Query: LRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSN
L + + YA CG +R +FD L +++F WNA+I Y N L+ + L F MI + PD +T+P VIKAC+ MS + +G+ VHG + +G +
Subjt: LRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSN
Query: TFV
FV
Subjt: TFV
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| Q3E9N1 Pentatricopeptide repeat-containing protein At4g39952, mitochondrial | 2.8e-13 | 39.09 | Show/hide |
Query: IPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALV
+ +I + S L SYA G L+ ++F ++ R +FLWN++IK + NG + L F SM+ SG PD +T P+V+ AC+E+ VG VHG L
Subjt: IPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALV
Query: -SGFSSNTFV
GF NT V
Subjt: -SGFSSNTFV
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| Q9FLZ9 Pentatricopeptide repeat-containing protein At5g39350 | 2.2e-18 | 42.16 | Show/hide |
Query: SNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGT-CWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNT
S L+V+YA CG + ARK+F+E+ S+ +N +I+MY+ GL+ D + VF M+ G C PD YT+P V KA E+ + +G++VHGR L S F +
Subjt: SNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGT-CWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNT
Query: FV
+V
Subjt: FV
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| Q9SIT7 Pentatricopeptide repeat-containing protein At2g13600 | 1.1e-12 | 36.45 | Show/hide |
Query: HNHLRDSPIPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGV
H+ + SP + + + S L Y+ CG V A+++FDE+ DR+V WN++I + NG + L VF M+ PD+ T VI AC+ +S + VG
Subjt: HNHLRDSPIPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGV
Query: LVHGRAL
VHGR +
Subjt: LVHGRAL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G18485.1 Pentatricopeptide repeat (PPR) superfamily protein | 1.4e-15 | 37.86 | Show/hide |
Query: LRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSN
L + + YA CG +R +FD L +++F WNA+I Y N L+ + L F MI + PD +T+P VIKAC+ MS + +G+ VHG + +G +
Subjt: LRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSN
Query: TFV
FV
Subjt: TFV
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| AT2G13600.1 Pentatricopeptide repeat (PPR) superfamily protein | 7.5e-14 | 36.45 | Show/hide |
Query: HNHLRDSPIPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGV
H+ + SP + + + S L Y+ CG V A+++FDE+ DR+V WN++I + NG + L VF M+ PD+ T VI AC+ +S + VG
Subjt: HNHLRDSPIPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGV
Query: LVHGRAL
VHGR +
Subjt: LVHGRAL
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| AT3G49142.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 3.3e-17 | 42.73 | Show/hide |
Query: DLRSN------LAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRAL
DLR N L +YA V ARK+FDE+ +R+V + N MI+ Y++NG + +G++VF +M C PD YTFP V+KACS + +G +HG A
Subjt: DLRSN------LAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRAL
Query: VSGFSSNTFV
G SS FV
Subjt: VSGFSSNTFV
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| AT4G39952.1 Pentatricopeptide repeat (PPR) superfamily protein | 2.0e-14 | 39.09 | Show/hide |
Query: IPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALV
+ +I + S L SYA G L+ ++F ++ R +FLWN++IK + NG + L F SM+ SG PD +T P+V+ AC+E+ VG VHG L
Subjt: IPNSIDLRSNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGTCWPDKYTFPLVIKACSEMSMLDVGVLVHGRALV
Query: -SGFSSNTFV
GF NT V
Subjt: -SGFSSNTFV
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| AT5G39350.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 1.6e-19 | 42.16 | Show/hide |
Query: SNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGT-CWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNT
S L+V+YA CG + ARK+F+E+ S+ +N +I+MY+ GL+ D + VF M+ G C PD YT+P V KA E+ + +G++VHGR L S F +
Subjt: SNLAVSYAFCGCVPLARKMFDELSDRSVFLWNAMIKMYLDNGLHFDGLRVFDSMICSGT-CWPDKYTFPLVIKACSEMSMLDVGVLVHGRALVSGFSSNT
Query: FV
+V
Subjt: FV
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