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Lag0000686 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000686
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationchr4:12906709..12907449
RNA-Seq ExpressionLag0000686
SyntenyLag0000686
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON44141.1 hypothetical protein PanWU01x14_268850 [Parasponia andersonii]2.8e-1444.33Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  GV W  S       + S L P + VW HF+++ L+PTTH   +S ERV+LLYS++ G  IN+G +I  EI +C  +K++ LFF SLIT++
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]2.8e-1444.33Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  G  W  S   V T + S L P + +W HF+++RL+PTTH   +S ERV+LLYS++ G  IN+G +I  EI +C  +K+  LFF SLI ++
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.2e-1446.39Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  G  W  S     T + S L P + VW HF+++RL+PTTH  T+S ERV+LLYS++ G  IN+G II  EI +   +K+  LFF SLIT++
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.1e-1445.36Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  G  W  S     T + S L P + VW HF+++RL+PTTH  T+S E V LLYS++ G  IN+G +I  EI +C  +K+  LFF SLIT +
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.6e-1430.3Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL---
        L+ VA  G  W  S     T + S L P + VW HF+++RL+PTTH   +S +R++LL+S++ G  IN+G +I  EI +C  +K   LFF SLIT+L   
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL---

Query:  --------------------------------WPSPSSEDLAIA---------YQQLDQIRDNL----------RTYWAYAKERHEAIREFYLSITPSIA
                                           PSS   A A          QQL  +   L          + +WAY+KER  A+++   +      
Subjt:  --------------------------------WPSPSSEDLAIA---------YQQLDQIRDNL----------RTYWAYAKERHEAIREFYLSITPSIA

Query:  LVFPYFPQSLLPQEDKDSEDEEEDERESSSD
          FP FPQ +L  +D D E E E +++ S++
Subjt:  LVFPYFPQSLLPQEDKDSEDEEEDERESSSD

TrEMBL top hitse value%identityAlignment
A0A2P5B5S0 Uncharacterized protein1.3e-1444.33Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  GV W  S       + S L P + VW HF+++ L+PTTH   +S ERV+LLYS++ G  IN+G +I  EI +C  +K++ LFF SLIT++
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

A0A2P5BNT0 Uncharacterized protein (Fragment)1.3e-1444.33Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  G  W  S   V T + S L P + +W HF+++RL+PTTH   +S ERV+LLYS++ G  IN+G +I  EI +C  +K+  LFF SLI ++
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

A0A2P5CPE8 Uncharacterized protein6.0e-1546.39Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  G  W  S     T + S L P + VW HF+++RL+PTTH  T+S ERV+LLYS++ G  IN+G II  EI +   +K+  LFF SLIT++
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

A0A2P5DAQ2 Uncharacterized protein1.0e-1445.36Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL
        L+ VA  G  W  S     T + S L P + VW HF+++RL+PTTH  T+S E V LLYS++ G  IN+G +I  EI +C  +K+  LFF SLIT +
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL

A0A2P5DXM3 Uncharacterized protein7.8e-1530.3Show/hide
Query:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL---
        L+ VA  G  W  S     T + S L P + VW HF+++RL+PTTH   +S +R++LL+S++ G  IN+G +I  EI +C  +K   LFF SLIT+L   
Subjt:  LKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQL---

Query:  --------------------------------WPSPSSEDLAIA---------YQQLDQIRDNL----------RTYWAYAKERHEAIREFYLSITPSIA
                                           PSS   A A          QQL  +   L          + +WAY+KER  A+++   +      
Subjt:  --------------------------------WPSPSSEDLAIA---------YQQLDQIRDNL----------RTYWAYAKERHEAIREFYLSITPSIA

Query:  LVFPYFPQSLLPQEDKDSEDEEEDERESSSD
          FP FPQ +L  +D D E E E +++ S++
Subjt:  LVFPYFPQSLLPQEDKDSEDEEEDERESSSD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAACACTGAAAATGGTGGCCAACAATGGAGTTCGATGGAAGAAGTCCCAAACTAAAGTGAAGACATTAGTGTCAAGTGATCTCAAGCCAGAATCAGTAGTGTG
GCTTCACTTTATAAGGAACAGGTTGATGCCAACAACCCATGATAGCACCATTTCAGTAGAGAGAGTTATGCTCCTTTACAGTATTATGAAGGGTTTTGAAATCAACATCG
GGATCATCATCAGGGAGGAAATCCTTTCGTGTGGAAGGAAGAAAGCAAAGAAGCTTTTCTTTGGGTCCCTTATTACCCAATTATGGCCCTCACCATCATCTGAAGACCTA
GCAATTGCCTATCAACAACTGGATCAAATCAGGGACAACCTGAGGACTTATTGGGCTTATGCCAAGGAGAGACATGAAGCCATTAGAGAGTTTTACCTCTCTATCACCCC
GAGTATTGCTCTTGTCTTTCCTTATTTCCCTCAATCGTTGCTGCCTCAAGAAGATAAGGATTCTGAAGATGAAGAAGAAGATGAAAGAGAGAGTTCCTCGGATAAGGACT
AA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAACACTGAAAATGGTGGCCAACAATGGAGTTCGATGGAAGAAGTCCCAAACTAAAGTGAAGACATTAGTGTCAAGTGATCTCAAGCCAGAATCAGTAGTGTG
GCTTCACTTTATAAGGAACAGGTTGATGCCAACAACCCATGATAGCACCATTTCAGTAGAGAGAGTTATGCTCCTTTACAGTATTATGAAGGGTTTTGAAATCAACATCG
GGATCATCATCAGGGAGGAAATCCTTTCGTGTGGAAGGAAGAAAGCAAAGAAGCTTTTCTTTGGGTCCCTTATTACCCAATTATGGCCCTCACCATCATCTGAAGACCTA
GCAATTGCCTATCAACAACTGGATCAAATCAGGGACAACCTGAGGACTTATTGGGCTTATGCCAAGGAGAGACATGAAGCCATTAGAGAGTTTTACCTCTCTATCACCCC
GAGTATTGCTCTTGTCTTTCCTTATTTCCCTCAATCGTTGCTGCCTCAAGAAGATAAGGATTCTGAAGATGAAGAAGAAGATGAAAGAGAGAGTTCCTCGGATAAGGACT
AA
Protein sequenceShow/hide protein sequence
MKETLKMVANNGVRWKKSQTKVKTLVSSDLKPESVVWLHFIRNRLMPTTHDSTISVERVMLLYSIMKGFEINIGIIIREEILSCGRKKAKKLFFGSLITQLWPSPSSEDL
AIAYQQLDQIRDNLRTYWAYAKERHEAIREFYLSITPSIALVFPYFPQSLLPQEDKDSEDEEEDERESSSDKD