; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0000690 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000690
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr4:13074602..13075399
RNA-Seq ExpressionLag0000690
SyntenyLag0000690
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023880912.1 uncharacterized protein LOC111993298 [Quercus suber]4.2e-7249.81Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +++  E LH++KN + +K GF A+KLDMSKAYDRVEW YL +IM +LGF   W++LV+ CIST ++SIL+NGE  G I+PSRG+RQGDPLSPYLFL+C+E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALL-NSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GL+ +L  +A N  + GFS+ +   K+SHLFF DDSL+F +A+  +    + IL  YEQASG+ +N  K+ +FFS+ V  +++  L   L +   +    
Subjt:  GLSALL-NSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLP+   R +     F+ ++VWS LQGWK +  SQ GREVL+K+++Q+IPT+AMGCF++P G+
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

XP_023905101.1 uncharacterized protein LOC112016863 [Quercus suber]1.5e-7451.32Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +++  E LH +K+H+  K+G+ ALKLDMSKAYDRVEW +L  +M ++GF   WI+L+M C++T T+SIL+NGE  GFI PSRGIRQGDPLSP+LFL+CTE
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSAL-LNSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GL  L + +A    + GFS+ R   KL+HLFF DDSL+F +A   E      +L  YE+ SG+ +N SK+A+FFS++ P D+++ +  +L ++  Q    
Subjt:  GLSAL-LNSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLPS   RGK   F ++ +KVW  LQGW+ +  SQ GREVLIKS+IQ+IP++AMGCF++P G+
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

XP_023909336.1 uncharacterized protein LOC112020997 [Quercus suber]5.5e-7249.81Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +++  E LH+LKN RK K+G+ ALKLDMSKAYDRVEW +L  +M +LGF  +WI+L+ SCIST +FSIL+NG  +G I P RG+RQGDPLSPYLFL+C E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALL-NSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GL AL+  +A N +++G S+ R   +++HL F DDSL+  KA + E      +L  YE+ASG+ +N  K+ +FFS N    +R  + S L + V+  L  
Subjt:  GLSALL-NSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLPS   RGK + F ++ +++W  +QGWK +  SQ G+EVLIKSI+Q++PTY+M CF++P+ +
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

XP_027122102.1 uncharacterized protein LOC113739055 [Coffea arabica]1.4e-7253.21Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +I+ HE+LH+LK+ R  K GF  LKLDMSKAYDRVEW +L +IM Q+GF P ++  +M+CIST  +S  +NG+  G +KPSRGIRQGDPLSPYLF+ICTE
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSA-RNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GLS L+  A  N+ L G  I R    +SHLFF  DSL++ KA+  E    K +LR Y QASG+ VN  KSA+FFSRN P   R  +S +LD     + G 
Subjt:  GLSALLNSA-RNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLP    R K + F FL++ + S LQ WK +  SQGG+EVLIK++I ++PTY M CF++PKG+
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

XP_030939568.1 uncharacterized protein LOC115964386 [Quercus lobata]4.2e-7249.43Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +++  E LH++KN RK KSGF ALKLDMSKAYDRVEW++L ++M +LGF   WI+L+ SC+ T +FS+L+NGE  G   P+RG+RQGDPLSPYLFL+C E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSAR-NRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GL +L+  A    SL G S+ RA  K+SHLFF DDSL+F +A   +      IL  YE+ASG+ +N  K+ +FFS N     ++++ S + +  T  +  
Subjt:  GLSALLNSAR-NRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLP+   RGK + F ++ +++W  +QGWK +  SQGGREVLIK+++Q++P+Y MGCF +PK +
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

TrEMBL top hitse value%identityAlignment
A0A2N9F345 Uncharacterized protein9.7e-7553.96Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +I+  E +HYLKN R+  +   A+KLDMSKAYDRVEW YL  IM +LGFHP W+ L+M+C++T T++I++NGE  G++KP RG+RQGDPLSPYLFL+C E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSARNRSL-AGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GLSALL  A   SL  G SI R  L++SHLFF DDS+IF +A + E      +L  Y  ASG+ VN  K+AVFFS N+P  +R  + SM     T     
Subjt:  GLSALLNSARNRSL-AGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLP    R K R F  + D+VW  LQGWK +  SQ GREVLIK++IQ+IP YAMGCF+ P G+
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

A0A2N9FN47 Uncharacterized protein2.8e-7453.96Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +++  EMLHYLKN R  K G  A KLDMSKAYDRVEW YL  I+ +LGFH  W++L+M C+S+ ++S+L+NGE  GFIKP RG+RQGDPLSPYLFLIC E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSAR-NRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GLSALL  A  +R + G SI R   ++SHLFF DDS+IF  A   +      +L  YE ASG+ VN SK+A+FFS N   DSR  +  +     T     
Subjt:  GLSALLNSAR-NRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLP    R K R F  L D+V   LQGWK +  SQ GRE+LIK++IQ+IPTYAM CF++P G+
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

A0A2N9GWG4 Uncharacterized protein2.8e-7453.96Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +++  EMLHYLKN R  K G  A KLDMSKAYDRVEW YL  I+ +LGFH  W++L+M C+S+ ++S+L+NGE  GFIKP RG+RQGDPLSPYLFLIC E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSAR-NRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GLSALL  A  +R + G SI R   ++SHLFF DDS+IF  A   +      +L  YE ASG+ VN SK+A+FFS N   DSR  +  +     T     
Subjt:  GLSALLNSAR-NRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI
        YLGLP    R K R F  L D+V   LQGWK +  SQ GRE+LIK++IQ+IPTYAM CF++P G+
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGI

A0A2N9GZI9 Reverse transcriptase domain-containing protein3.7e-7451.5Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +++  E LH++   R+ KSG  ALKLDMSKAYDRVEW YL ++M Q+GFH +W+ ++M CIST ++SIL+NGE  G+IKPSRG+RQGDPLSPYLFL C E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSARNR-SLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GL +LL  A+N  ++ G SI+R   KL+HLFF DDSL+F KA   E    + IL  YE ASG+ +N  K+ +FFS++ P   + ++  ML + V      
Subjt:  GLSALLNSARNR-SLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGIL
        YLGLPS   R K   F  + ++VWS L+GWK +  SQ G+E+LIKS+ Q+IPTYAM CFR+P+ ++
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGIL

A0A2N9J2A6 Reverse transcriptase domain-containing protein3.3e-7554.55Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        +I+  EMLHYLKNHR   +   A KLDMSKAYDRVEW YL +I+ +LGFH  W++LVM+C+++ T+SI++NGE  GF+KP+RG+RQ DPLSP+LFLIC E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSARNRSL-AGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP
        GLSALL  A   SL  G SI R   ++SHLFF DDS+IF KA   E G  + IL  YE+ASG+ +N  K+ +FFS N P D+R  ++++    VT     
Subjt:  GLSALLNSARNRSL-AGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGP

Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKG
        YLGLP    R K   F  L D+V   LQGWK +  SQ GREVLIK++IQ+IPTYAM CF++P G
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKG

SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein2.7e-1324.59Show/hide
Query:  MLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALL
        ++HY+ N  K+K+    + LD  KA+D+++  ++ +++ + G    ++N++ +  S    +I +NGE    I    G RQG PLSPYLF I  E L+  +
Subjt:  MLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALL

Query:  NSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVF-FSRNVPADSRQYLSSMLDMKVTQSLGPYLG--L
           + + + G  I +  +K+S L   DD ++++            ++  + +  G  +N +KS  F +++N  A+    +       +  +   YLG  L
Subjt:  NSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVF-FSRNVPADSRQYLSSMLDMKVTQSLGPYLG--L

Query:  PSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSII
            +    ++F+ L  ++   L+ WK    S  GR  ++K  I
Subjt:  PSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSII

P14381 Transposon TX1 uncharacterized 149 kDa protein2.1e-1024.14Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE
        + L  ++LH+    R+     A L LD  KA+DRV+  YL   +    F P+++  + +  ++    + +N      +   RG+RQG PLS  L+ +  E
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTE

Query:  GLSALLNSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPAD--SRQYLSSMLDMKVTQSLG
            LL     + L G  +    +++    + DD +I +    ++    +     Y  AS   +N SKS+     ++  D     +     + K+ + LG
Subjt:  GLSALLNSARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPAD--SRQYLSSMLDMKVTQSLG

Query:  PYLGLPSAFQRGKTRDFQFLLDKVWSLLQGWK--CQFFSQGGREVLIKSIIQSIPTYAMGC
         YL   SA +   +++F  L + V + L  WK   +  S  GR ++I  ++ S   Y + C
Subjt:  PYLGLPSAFQRGKTRDFQFLLDKVWSLLQGWK--CQFFSQGGREVLIKSIIQSIPTYAMGC

P92555 Uncharacterized mitochondrial protein AtMg012502.3e-1238.94Show/hide
Query:  LMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNSARNRS-LAGFSIARACLKLSHLFFVDD--SLIFLKAAALEFGHFKLILRDYEQASGKSVN
        ++NG   G + PSRG+RQGDPLSPYLF++CTE LS L   A+ +  L G  ++    +++HL F DD  S  ++  AA  +  F L +R ++   G  VN
Subjt:  LMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNSARNRS-LAGFSIARACLKLSHLFFVDD--SLIFLKAAALEFGHFKLILRDYEQASGKSVN

Query:  LSKSAVFFSRNVP
           S ++F  ++P
Subjt:  LSKSAVFFSRNVP

Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)1.4e-0627.95Show/hide
Query:  YLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMN-GESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNS
        Y+ + R+++  +  + LD+ KA+D V    + + + +LG      N +   +S +T +I +  G     I   RG++QGDPLSP+LF      L  LL S
Subjt:  YLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMN-GESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNS

Query:  ARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKS
         ++    G +I     K+  L F DD L+ L+   +        + ++ +  G S+N  KS
Subjt:  ARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKS

Q05118 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)1.6e-1029.21Show/hide
Query:  HYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNS
        HY+K  R +   +  + LD+ KA+D V    + + M   G      + +MS I+    +I++ G +   I    G++QGDPLSP LF I  + L   LN 
Subjt:  HYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNS

Query:  ARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADS--RQYLSSMLDMKVTQSLG-----PYL
         +     G S+  AC K++ L F DD L+ L+   ++  +       Y +  G ++N  K A   +  V   S  R   S  +D +  + LG      YL
Subjt:  ARNRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADS--RQYLSSMLDMKVTQSLG-----PYL

Query:  GL
        GL
Subjt:  GL

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.8e-0533.33Show/hide
Query:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGIL
        YLGLP   ++  T D+  L++K+   +  W  +  S  GR  LI S+I S+  + M  FR+P   +
Subjt:  YLGLPSAFQRGKTRDFQFLLDKVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGIL

AT4G20520.1 RNA binding;RNA-directed DNA polymerases3.1e-0435.19Show/hide
Query:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWI
        ++   E +H ++  +K   G+  LKLD+ KAYDR+ W YL   +   GF   W+
Subjt:  MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWI

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)1.6e-1338.94Show/hide
Query:  LMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNSARNRS-LAGFSIARACLKLSHLFFVDD--SLIFLKAAALEFGHFKLILRDYEQASGKSVN
        ++NG   G + PSRG+RQGDPLSPYLF++CTE LS L   A+ +  L G  ++    +++HL F DD  S  ++  AA  +  F L +R ++   G  VN
Subjt:  LMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNSARNRS-LAGFSIARACLKLSHLFFVDD--SLIFLKAAALEFGHFKLILRDYEQASGKSVN

Query:  LSKSAVFFSRNVP
           S ++F  ++P
Subjt:  LSKSAVFFSRNVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTGGGACATGAAATGTTACATTATCTAAAAAATCATCGTAAGGAGAAGTCTGGTTTTGCTGCACTAAAATTGGATATGTCAAAGGCATATGATAGGGTGGAATG
GATATATTTGAGTCAGATTATGGCTCAGTTGGGTTTCCATCCGGAATGGATTAATTTGGTTATGAGTTGTATATCGACAACCACTTTTTCCATCCTTATGAATGGTGAGT
CTTTCGGATTTATCAAGCCATCTAGAGGGATAAGACAGGGAGATCCTTTATCTCCATATCTATTTTTAATTTGTACGGAGGGTCTTTCAGCTCTTTTGAATTCAGCACGA
AATAGATCACTGGCTGGATTTTCGATAGCGAGAGCTTGTCTAAAGCTTTCTCATCTATTTTTTGTAGATGATAGTCTGATTTTTCTTAAGGCTGCAGCTTTGGAATTTGG
TCATTTTAAGTTAATTTTGAGGGATTATGAACAGGCCTCTGGGAAGAGTGTTAATCTTAGTAAATCGGCAGTTTTCTTTTCGAGGAATGTCCCTGCTGATTCCAGACAAT
ACCTTAGTAGCATGCTTGACATGAAAGTGACTCAGTCTCTTGGACCTTATTTGGGCTTACCTTCAGCTTTTCAGAGAGGGAAAACTCGTGACTTCCAATTTCTGCTTGAT
AAAGTTTGGTCATTACTGCAGGGATGGAAGTGTCAGTTCTTTTCTCAAGGTGGCAGGGAGGTGTTGATCAAAAGTATCATTCAGTCCATCCCTACTTATGCGATGGGTTG
TTTTAGGATCCCCAAAGGCATATTATAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTTGGGACATGAAATGTTACATTATCTAAAAAATCATCGTAAGGAGAAGTCTGGTTTTGCTGCACTAAAATTGGATATGTCAAAGGCATATGATAGGGTGGAATG
GATATATTTGAGTCAGATTATGGCTCAGTTGGGTTTCCATCCGGAATGGATTAATTTGGTTATGAGTTGTATATCGACAACCACTTTTTCCATCCTTATGAATGGTGAGT
CTTTCGGATTTATCAAGCCATCTAGAGGGATAAGACAGGGAGATCCTTTATCTCCATATCTATTTTTAATTTGTACGGAGGGTCTTTCAGCTCTTTTGAATTCAGCACGA
AATAGATCACTGGCTGGATTTTCGATAGCGAGAGCTTGTCTAAAGCTTTCTCATCTATTTTTTGTAGATGATAGTCTGATTTTTCTTAAGGCTGCAGCTTTGGAATTTGG
TCATTTTAAGTTAATTTTGAGGGATTATGAACAGGCCTCTGGGAAGAGTGTTAATCTTAGTAAATCGGCAGTTTTCTTTTCGAGGAATGTCCCTGCTGATTCCAGACAAT
ACCTTAGTAGCATGCTTGACATGAAAGTGACTCAGTCTCTTGGACCTTATTTGGGCTTACCTTCAGCTTTTCAGAGAGGGAAAACTCGTGACTTCCAATTTCTGCTTGAT
AAAGTTTGGTCATTACTGCAGGGATGGAAGTGTCAGTTCTTTTCTCAAGGTGGCAGGGAGGTGTTGATCAAAAGTATCATTCAGTCCATCCCTACTTATGCGATGGGTTG
TTTTAGGATCCCCAAAGGCATATTATAG
Protein sequenceShow/hide protein sequence
MILGHEMLHYLKNHRKEKSGFAALKLDMSKAYDRVEWIYLSQIMAQLGFHPEWINLVMSCISTTTFSILMNGESFGFIKPSRGIRQGDPLSPYLFLICTEGLSALLNSAR
NRSLAGFSIARACLKLSHLFFVDDSLIFLKAAALEFGHFKLILRDYEQASGKSVNLSKSAVFFSRNVPADSRQYLSSMLDMKVTQSLGPYLGLPSAFQRGKTRDFQFLLD
KVWSLLQGWKCQFFSQGGREVLIKSIIQSIPTYAMGCFRIPKGIL