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Lag0000691 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000691
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr4:13128826..13129221
RNA-Seq ExpressionLag0000691
SyntenyLag0000691
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]3.0e-3153.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ F D  Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KRTL+KFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +I+E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

KAA0036941.1 girdin-like [Cucumis melo var. makuwa]1.8e-3153.79Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ F D  Y CF F   +L+PTIEEY  ML++ EK  E++Y FNP+ T KRTL+KFL  VH  E+QK +KVKG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +I+E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

KAA0036949.1 girdin-like [Cucumis melo var. makuwa]3.0e-3153.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ F D  Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KRTL+KFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +I+E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]7.2e-3353.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HI +LMYI +N F ++ ++ FWD  Y CF F   DL+PTIEEY  ML++ EK  E++Y FNP+ T KRTL+KFL  VH  E+QK +K+KG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +++E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]3.6e-3253.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ FWD  Y CF F   DL+PTIEEY  ML++  K  E++Y FNP+ T KRTL+KFL  VH  ++QK +KVKG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +++E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein1.5e-3153.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ F D  Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KRTL+KFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +I+E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

A0A5A7T5S7 Girdin-like8.6e-3253.79Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ F D  Y CF F   +L+PTIEEY  ML++ EK  E++Y FNP+ T KRTL+KFL  VH  E+QK +KVKG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +I+E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

A0A5A7T6E2 Girdin-like1.5e-3153.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ F D  Y CF F   DL+PTIEEY  ML++ +K  E++Y FNP+ T KRTL+KFL  VH  E+QK +K KG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +I+E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

A0A5A7UWQ6 Uncharacterized protein3.5e-3353.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HI +LMYI +N F ++ ++ FWD  Y CF F   DL+PTIEEY  ML++ EK  E++Y FNP+ T KRTL+KFL  VH  E+QK +K+KG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +++E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

A0A5A7VFL0 Girdin-like1.7e-3253.03Show/hide
Query:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE
        MFSK+Y HIA+LMYI +N F ++ ++ FWD  Y CF F   DL+PTIEEY  ML++  K  E++Y FNP+ T KRTL+KFL  VH  ++QK +KVKG EE
Subjt:  MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFL-AVHLKEVQKNVKVKGVEE

Query:  SISVDYLTELARKHINEEKGLVLLALCIYRMV
        ++  DYL ++ + +++E+KGL LLALCIY  V
Subjt:  SISVDYLTELARKHINEEKGLVLLALCIYRMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCGAAGAGATACGACCATATTGCAGACCTTATGTATATTCTGATTAACCAGTTCACCATCCAGACTTTATTAGAATTCTGGGACTCGACCTACAAGTGTTTCGC
GTTCCAAGATTTTGACTTGGTACCGACCATTGAGGAGTACCACACGATGCTGAATATTGAAGAAAAAGGTGGAGAGATGATCTATTGTTTCAACCCACAGCTAACTGCGA
AAAGAACTTTAGCCAAATTTCTAGCTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGTAGATTATCTAACAGAACTCGCT
CGCAAACACATAAATGAAGAAAAGGGTCTGGTTTTGTTAGCTTTGTGCATCTACAGGATGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCGAAGAGATACGACCATATTGCAGACCTTATGTATATTCTGATTAACCAGTTCACCATCCAGACTTTATTAGAATTCTGGGACTCGACCTACAAGTGTTTCGC
GTTCCAAGATTTTGACTTGGTACCGACCATTGAGGAGTACCACACGATGCTGAATATTGAAGAAAAAGGTGGAGAGATGATCTATTGTTTCAACCCACAGCTAACTGCGA
AAAGAACTTTAGCCAAATTTCTAGCTGTACACCTGAAGGAAGTGCAGAAAAATGTGAAAGTGAAAGGGGTTGAAGAGTCTATATCTGTAGATTATCTAACAGAACTCGCT
CGCAAACACATAAATGAAGAAAAGGGTCTGGTTTTGTTAGCTTTGTGCATCTACAGGATGGTCTAG
Protein sequenceShow/hide protein sequence
MFSKRYDHIADLMYILINQFTIQTLLEFWDSTYKCFAFQDFDLVPTIEEYHTMLNIEEKGGEMIYCFNPQLTAKRTLAKFLAVHLKEVQKNVKVKGVEESISVDYLTELA
RKHINEEKGLVLLALCIYRMV