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Lag0000697 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0000697
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr4:13367025..13367549
RNA-Seq ExpressionLag0000697
SyntenyLag0000697
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7135905.1 hypothetical protein RHSIM_Rhsim08G0208800 [Rhododendron simsii]1.7e-2943.59Show/hide
Query:  FSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVDII
        F ++ V K+AIK+Y +K   +++++KNDKKRV   C+ GC W ++ +   GE ++QV+TFK +H C   +TNRN  S+ IA++Y+   R      +    
Subjt:  FSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVDII

Query:  ETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKM
        E VK+EL   +SKSQ YRA+ KA   I G  IAQY  LW+YC +L+RSN  S V M
Subjt:  ETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKM

KAF7151442.1 hypothetical protein RHSIM_Rhsim02G0014700 [Rhododendron simsii]8.4e-2942.95Show/hide
Query:  FSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVDII
        F ++ V K+AIK+Y +K   +++++KNDKKRV   C+ GC W ++ +   GE ++QV+TF  +H C   +TNRN  S+ I ++Y+   R      +    
Subjt:  FSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVDII

Query:  ETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKM
        E V++EL   +SKSQ YRAR KA   I G  IAQY  LWDYC +L+RSN  S V M
Subjt:  ETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKM

VVA36347.1 PREDICTED: transposon [Prunus dulcis]3.2e-2838.18Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        MKF + KVLK+AI+ Y     Y  +++KNDK R++  C  GC WRL+ S+ QGE T+Q+K++  +HSC + F N+N  S+++++RY+S  +     +   
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW
        +   V REL  ++S  Q Y+A++KA   I GT   QY++LW+YC +++++N  S + M  D  H+
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW

XP_028052320.1 uncharacterized protein LOC114256842 [Camellia sinensis]1.9e-2840.38Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        M F+ +   K+A++EY VKGGY ++  K++  +V  +C  GC WRL+ S   GE T Q+KT+K  H+C R + +R   S+++A +Y++ FR    W++ +
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFV
          +TVK +   ++SK + YRARK+A+ Q++GT   QY +LWDY A+L R+N  S V
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFV

XP_034229423.1 uncharacterized protein LOC117638399 [Prunus dulcis]3.2e-2838.18Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        MKF + KVLK+AI+ Y     Y  +++KNDK R++  C  GC WRL+ S+ QGE T+Q+K++  +HSC + F N+N  S+++++RY+S  +     +   
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW
        +   V REL  ++S  Q Y+A++KA   I GT   QY++LW+YC +++++N  S + M  D  H+
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW

TrEMBL top hitse value%identityAlignment
A0A2N9FV19 SWIM-type domain-containing protein1.2e-2836.02Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        + F ++ V ++A+KEY ++ GY    ++N+K RVT  C   C WR+H S+ Q +  F++KTFK EH+C + + NR   SSWIA +Y  + R  + W    
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCD
        + E ++R+ N  +SK + YRA+  A+K I+G+ + Q+++LW YCA +++    S +++L +
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCD

A0A2N9GX21 SWIM-type domain-containing protein1.2e-2836.02Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        + F ++ V ++A+KEY ++ GY    ++N+K RVT  C   C WR+H S+ Q +  F++KTFK EH+C + + NR   SSWIA +Y  + R  + W    
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCD
        + E ++R+ N  +SK + YRA+  A+K I+G+ + Q+++LW YCA +++    S +++L +
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCD

A0A2N9H391 SWIM-type domain-containing protein1.2e-2836.02Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        + F ++ V ++A+KEY ++ GY    ++N+K RVT  C   C WR+H S+ Q +  F++KTFK EH+C + + NR   SSWIA +Y  + R  + W    
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCD
        + E ++R+ N  +SK + YRA+  A+K I+G+ + Q+++LW YCA +++    S +++L +
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCD

A0A5E4G990 PREDICTED: transposon1.5e-2838.18Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        MKF + KVLK+AI+ Y     Y  +++KNDK R++  C  GC WRL+ S+ QGE T+Q+K++  +HSC + F N+N  S+++++RY+S  +     +   
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW
        +   V REL  ++S  Q Y+A++KA   I GT   QY++LW+YC +++++N  S + M  D  H+
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW

M5X0G1 ZnF_PMZ domain-containing protein (Fragment)1.5e-2838.18Show/hide
Query:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD
        MKF + KVLK+AI+ Y     Y  +++KNDK R++  C  GC WRL+ S+ QGE T+Q+K++  +HSC + F N+N  S+++++RY+S  +     +   
Subjt:  MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVD

Query:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW
        +   V REL  ++S  Q Y+A++KA   I GT   QY++LW+YC +++++N  S + M  D  H+
Subjt:  IIETVKRELNCQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTTAGCACTTCTAAGGTATTGAAGGAGGCCATAAAAGAGTATGTAGTTAAAGGAGGATATAGTATTCGATTGATAAAGAACGACAAGAAACGGGTCACGACTAC
TTGTGATGGAGGATGTACTTGGAGACTACATGTTAGTGTAGGTCAAGGGGAGGCCACTTTTCAAGTAAAGACCTTCAAATGCGAGCATAGTTGTTGTAGGGAGTTCACTA
ATCGAAACTGGAAATCTTCATGGATTGCTAGAAGATACATATCATGGTTTAGACAACAACTGGATTGGAGGTTGGTTGATATTATTGAGACAGTGAAGCGTGAGCTTAAT
TGTCAACTTTCAAAGAGCCAAACATATAGGGCTAGAAAGAAAGCAGTAAAACAAATTAATGGGACCATTATTGCACAATACCAACGGTTGTGGGATTATTGTGCTAAACT
TCAGAGGTCAAATGAAAGTTCATTTGTGAAAATGTTGTGTGATAGGGTGCATTGGTGGACCGCAAAGTGCACGGGCCGCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTTAGCACTTCTAAGGTATTGAAGGAGGCCATAAAAGAGTATGTAGTTAAAGGAGGATATAGTATTCGATTGATAAAGAACGACAAGAAACGGGTCACGACTAC
TTGTGATGGAGGATGTACTTGGAGACTACATGTTAGTGTAGGTCAAGGGGAGGCCACTTTTCAAGTAAAGACCTTCAAATGCGAGCATAGTTGTTGTAGGGAGTTCACTA
ATCGAAACTGGAAATCTTCATGGATTGCTAGAAGATACATATCATGGTTTAGACAACAACTGGATTGGAGGTTGGTTGATATTATTGAGACAGTGAAGCGTGAGCTTAAT
TGTCAACTTTCAAAGAGCCAAACATATAGGGCTAGAAAGAAAGCAGTAAAACAAATTAATGGGACCATTATTGCACAATACCAACGGTTGTGGGATTATTGTGCTAAACT
TCAGAGGTCAAATGAAAGTTCATTTGTGAAAATGTTGTGTGATAGGGTGCATTGGTGGACCGCAAAGTGCACGGGCCGCAAGTAA
Protein sequenceShow/hide protein sequence
MKFSTSKVLKEAIKEYVVKGGYSIRLIKNDKKRVTTTCDGGCTWRLHVSVGQGEATFQVKTFKCEHSCCREFTNRNWKSSWIARRYISWFRQQLDWRLVDIIETVKRELN
CQLSKSQTYRARKKAVKQINGTIIAQYQRLWDYCAKLQRSNESSFVKMLCDRVHWWTAKCTGRK